RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 QRICH2Q9H0J4 1663 aa15.1■□□□□ 0.01
SPIDR-205ENST00000518060 RALGAPBQ86X10 1494 aa15.1■□□□□ 0.01
SPIDR-205ENST00000518060 ABCA3Q99758 1704 aa15.1■□□□□ 0.01
SPIDR-205ENST00000518060 A0A0G2JS52 829 aa15.1■□□□□ 0.01
SPIDR-205ENST00000518060 MYT1Q01538 1121 aa15.1■□□□□ 0.01
SPIDR-205ENST00000518060 TRPM1Q7Z4N2 1603 aa15.1■□□□□ 0.01
SPIDR-205ENST00000518060 FAM83GA6ND36 823 aa15.08■□□□□ 0
SPIDR-205ENST00000518060 NBPF8Q3BBV2 869 aa15.08■□□□□ 0
SPIDR-205ENST00000518060 PRDM11Q9NQV5 511 aa15.08■□□□□ 0
SPIDR-205ENST00000518060 TOPAZ1Q8N9V7 1692 aa15.08■□□□□ 0
SPIDR-205ENST00000518060 ALS2Q96Q42 1657 aa15.08■□□□□ 0
SPIDR-205ENST00000518060 EVC2Q86UK5 1308 aa15.08■□□□□ 0
SPIDR-205ENST00000518060 PLCH1Q4KWH8 1693 aa15.07■□□□□ 0
SPIDR-205ENST00000518060 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.07■□□□□ 0
SPIDR-205ENST00000518060 BTG4Q9NY30 223 aa15.07■□□□□ 0
SPIDR-205ENST00000518060 POLR3AO14802 1390 aaPredicted RBP15.07■□□□□ 0
SPIDR-205ENST00000518060 PLEKHG3A1L390 1219 aa15.06■□□□□ 0
SPIDR-205ENST00000518060 VPS72Q15906 364 aa15.06■□□□□ 0
SPIDR-205ENST00000518060 ABTB2Q8N961 1025 aa15.06■□□□□ 0
SPIDR-205ENST00000518060 CARD11Q9BXL7 1154 aa15.05■□□□□ -0
SPIDR-205ENST00000518060 CABP1Q9NZU7 370 aa15.05■□□□□ -0
SPIDR-205ENST00000518060 GLI3P10071 1580 aa15.05■□□□□ -0
SPIDR-205ENST00000518060 KIAA0232Q92628 1395 aa15.04■□□□□ -0
SPIDR-205ENST00000518060 ZC3H6P61129 1189 aaKnown RBP15.04■□□□□ -0
SPIDR-205ENST00000518060 CHRNA2Q15822 529 aa15.04■□□□□ -0
SPIDR-205ENST00000518060 NWD2Q9ULI1 1742 aa15.03■□□□□ -0
SPIDR-205ENST00000518060 SEPT12Q8IYM1 358 aa15.03■□□□□ -0
SPIDR-205ENST00000518060 COL14A1Q05707 1796 aaKnown RBP15.03■□□□□ -0
SPIDR-205ENST00000518060 ZBTB7CA1YPR0 619 aa15.02■□□□□ -0
SPIDR-205ENST00000518060 STRN4Q9NRL3 753 aa15.02■□□□□ -0
SPIDR-205ENST00000518060 FAM98CQ17RN3 349 aaKnown RBP15.01□□□□□ -0.01
SPIDR-205ENST00000518060 NLRP13Q86W25 1043 aa15□□□□□ -0.01
SPIDR-205ENST00000518060 USP6P35125 1406 aa15□□□□□ -0.01
SPIDR-205ENST00000518060 PHRF1Q9P1Y6 1649 aaKnown RBP14.99□□□□□ -0.01
SPIDR-205ENST00000518060 EVA1CP58658 441 aa14.99□□□□□ -0.01
SPIDR-205ENST00000518060 NRAPQ86VF7 1730 aa14.99□□□□□ -0.01
SPIDR-205ENST00000518060 CRYBG1Q9Y4K1 1723 aa14.99□□□□□ -0.01
SPIDR-205ENST00000518060 NLRP6P59044 892 aa14.98□□□□□ -0.01
SPIDR-205ENST00000518060 KRT27Q7Z3Y8 459 aa14.97□□□□□ -0.01
SPIDR-205ENST00000518060 PCGF6Q9BYE7 350 aa14.97□□□□□ -0.01
SPIDR-205ENST00000518060 USP35Q9P2H5 1018 aa14.97□□□□□ -0.01
SPIDR-205ENST00000518060 NRKQ7Z2Y5 1582 aa14.97□□□□□ -0.01
SPIDR-205ENST00000518060 BRD4O60885 1362 aaPredicted RBP14.97□□□□□ -0.01
SPIDR-205ENST00000518060 USP19O94966 1318 aa14.96□□□□□ -0.01
SPIDR-205ENST00000518060 SPATA31A5Q5VU36 1347 aa14.96□□□□□ -0.01
SPIDR-205ENST00000518060 SPATA31A7Q8IWB4 1347 aa14.96□□□□□ -0.01
SPIDR-205ENST00000518060 SOX12O15370 315 aa14.96□□□□□ -0.01
SPIDR-205ENST00000518060 SF3B2Q13435 895 aaKnown RBP14.96□□□□□ -0.01
SPIDR-205ENST00000518060 TMC1Q8TDI8 760 aa14.96□□□□□ -0.01
SPIDR-205ENST00000518060 GCP02774 474 aa14.95□□□□□ -0.02
SPIDR-205ENST00000518060 CCDC125Q86Z20 511 aa14.94□□□□□ -0.02
SPIDR-205ENST00000518060 KTN1Q86UP2 1357 aaKnown RBP14.94□□□□□ -0.02
SPIDR-205ENST00000518060 BLMP54132 1417 aaPredicted RBP14.93□□□□□ -0.02
SPIDR-205ENST00000518060 ONECUT3O60422 494 aaPredicted RBP14.93□□□□□ -0.02
SPIDR-205ENST00000518060 ZNF692Q9BU19 519 aaPredicted RBP14.93□□□□□ -0.02
SPIDR-205ENST00000518060 CPDO75976 1380 aa14.93□□□□□ -0.02
SPIDR-205ENST00000518060 SBNO2Q9Y2G9 1366 aa14.93□□□□□ -0.02
SPIDR-205ENST00000518060 SPATA31A1Q5TZJ5 1347 aa14.92□□□□□ -0.02
SPIDR-205ENST00000518060 TTC21BQ7Z4L5 1316 aa14.92□□□□□ -0.02
SPIDR-205ENST00000518060 SSH2Q76I76 1423 aa14.92□□□□□ -0.02
SPIDR-205ENST00000518060 BRWD3Q6RI45 1802 aa14.92□□□□□ -0.02
SPIDR-205ENST00000518060 FAM182BQ5T319 152 aa14.91□□□□□ -0.02
SPIDR-205ENST00000518060 LARP1Q6PKG0 1096 aaKnown RBP14.91□□□□□ -0.02
SPIDR-205ENST00000518060 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.91□□□□□ -0.02
SPIDR-205ENST00000518060 EP400Q96L91 3159 aa14.91□□□□□ -0.02
SPIDR-205ENST00000518060 HDGFL2Q7Z4V5 671 aaPredicted RBP14.9□□□□□ -0.02
SPIDR-205ENST00000518060 PIK3C2AO00443 1686 aa14.9□□□□□ -0.02
SPIDR-205ENST00000518060 CAMTA1Q9Y6Y1 1673 aa14.9□□□□□ -0.02
SPIDR-205ENST00000518060 TTC21AQ8NDW8 1320 aa14.9□□□□□ -0.02
SPIDR-205ENST00000518060 SLIT3O75094 1523 aa14.89□□□□□ -0.03
SPIDR-205ENST00000518060 ST20-MTHFSA0A0A6YYL1 179 aa14.89□□□□□ -0.03
SPIDR-205ENST00000518060 DEFB132Q7Z7B7 95 aa14.89□□□□□ -0.03
SPIDR-205ENST00000518060 ZRANB1Q9UGI0 708 aa14.89□□□□□ -0.03
SPIDR-205ENST00000518060 TCP11L2Q8N4U5 519 aa14.88□□□□□ -0.03
SPIDR-205ENST00000518060 KCNH5Q8NCM2 988 aa14.88□□□□□ -0.03
SPIDR-205ENST00000518060 CPSF1Q10570 1443 aaKnown RBP14.87□□□□□ -0.03
SPIDR-205ENST00000518060 CSB-PGBD3P0DP91 1061 aa14.87□□□□□ -0.03
SPIDR-205ENST00000518060 SLC12A5Q9H2X9 1139 aa14.87□□□□□ -0.03
SPIDR-205ENST00000518060 TERF2IPQ9NYB0 399 aa14.87□□□□□ -0.03
SPIDR-205ENST00000518060 AKAP12Q02952 1782 aa14.87□□□□□ -0.03
SPIDR-205ENST00000518060 COL5A2P05997 1499 aaPredicted RBP14.87□□□□□ -0.03
SPIDR-205ENST00000518060 LMO7Q8WWI1 1683 aa14.87□□□□□ -0.03
SPIDR-205ENST00000518060 THSD7AQ9UPZ6 1657 aa14.87□□□□□ -0.03
SPIDR-205ENST00000518060 AATKQ6ZMQ8 1374 aa14.86□□□□□ -0.03
SPIDR-205ENST00000518060 PDE3BQ13370 1112 aa14.86□□□□□ -0.03
SPIDR-205ENST00000518060 TOM1L2Q6ZVM7 507 aa14.86□□□□□ -0.03
SPIDR-205ENST00000518060 NME9Q86XW9 330 aa14.86□□□□□ -0.03
SPIDR-205ENST00000518060 USP47Q96K76 1375 aa14.85□□□□□ -0.03
SPIDR-205ENST00000518060 BAG6P46379 1132 aa14.85□□□□□ -0.03
SPIDR-205ENST00000518060 BARGINQ6ZT62 677 aa14.85□□□□□ -0.03
SPIDR-205ENST00000518060 CRB1P82279 1406 aa14.84□□□□□ -0.03
SPIDR-205ENST00000518060 A0A1W2PP64 1363 aa14.84□□□□□ -0.03
SPIDR-205ENST00000518060 MON2Q7Z3U7 1717 aa14.83□□□□□ -0.03
SPIDR-205ENST00000518060 CD163L1Q9NR16 1453 aa14.83□□□□□ -0.03
SPIDR-205ENST00000518060 TMF1P82094 1093 aa14.83□□□□□ -0.04
SPIDR-205ENST00000518060 CCER1Q8TC90 406 aaPredicted RBP14.83□□□□□ -0.04
SPIDR-205ENST00000518060 TESK2Q96S53 571 aa14.83□□□□□ -0.04
SPIDR-205ENST00000518060 EDC4Q6P2E9 1401 aaKnown RBP14.83□□□□□ -0.04
SPIDR-205ENST00000518060 FAM196AQ6ZSG2 479 aa14.82□□□□□ -0.04
SPIDR-205ENST00000518060 ARHGEF25Q86VW2 580 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms