RNA–Protein interactions for RNA: ENST00000517990.5

PABPC1-204, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-204ENST00000517990 ZNF326Q5BKZ1 582 aaKnown RBP9.5□□□□□ -0.89
PABPC1-204ENST00000517990 NHSL1Q5SYE7 1610 aa9.49□□□□□ -0.89
PABPC1-204ENST00000517990 MST1RQ04912 1400 aa9.49□□□□□ -0.89
PABPC1-204ENST00000517990 E9PCH4 1651 aa9.49□□□□□ -0.89
PABPC1-204ENST00000517990 ANKRD13DQ6ZTN6 518 aa9.49□□□□□ -0.89
PABPC1-204ENST00000517990 PNPLA6Q8IY17 1366 aa9.49□□□□□ -0.89
PABPC1-204ENST00000517990 RGS12O14924 1447 aa9.48□□□□□ -0.89
PABPC1-204ENST00000517990 ADAMTS2O95450 1211 aa9.48□□□□□ -0.89
PABPC1-204ENST00000517990 CCDC125Q86Z20 511 aa9.48□□□□□ -0.89
PABPC1-204ENST00000517990 TRPC5Q9UL62 973 aaPredicted RBP9.48□□□□□ -0.89
PABPC1-204ENST00000517990 IQGAP3Q86VI3 1631 aa9.48□□□□□ -0.89
PABPC1-204ENST00000517990 NUP155O75694 1391 aa9.48□□□□□ -0.89
PABPC1-204ENST00000517990 PTPRUQ92729 1446 aa9.48□□□□□ -0.89
PABPC1-204ENST00000517990 ADGRL3Q9HAR2 1447 aa9.48□□□□□ -0.89
PABPC1-204ENST00000517990 SETBP1Q9Y6X0 1596 aa9.47□□□□□ -0.89
PABPC1-204ENST00000517990 IRX2Q9BZI1 471 aaPredicted RBP9.47□□□□□ -0.89
PABPC1-204ENST00000517990 USP21Q9UK80 565 aa9.47□□□□□ -0.89
PABPC1-204ENST00000517990 XRN1Q8IZH2 1706 aaKnown RBP9.47□□□□□ -0.89
PABPC1-204ENST00000517990 ROCK1Q13464 1354 aa9.47□□□□□ -0.89
PABPC1-204ENST00000517990 DOK7Q18PE1 504 aa9.45□□□□□ -0.9
PABPC1-204ENST00000517990 PTCH1Q13635 1447 aa9.45□□□□□ -0.9
PABPC1-204ENST00000517990 HCSTQ9UBK5 93 aa9.44□□□□□ -0.9
PABPC1-204ENST00000517990 SPHKAPQ2M3C7 1700 aa9.43□□□□□ -0.9
PABPC1-204ENST00000517990 NRXN3Q9Y4C0 1643 aa9.43□□□□□ -0.9
PABPC1-204ENST00000517990 C1orf167Q5SNV9 1468 aa9.43□□□□□ -0.9
PABPC1-204ENST00000517990 METP08581 1390 aa9.43□□□□□ -0.9
PABPC1-204ENST00000517990 DDX17Q92841 729 aaKnown RBP9.43□□□□□ -0.9
PABPC1-204ENST00000517990 SOS2Q07890 1332 aaPredicted RBP9.42□□□□□ -0.9
PABPC1-204ENST00000517990 VGFO15240 615 aaPredicted RBP9.42□□□□□ -0.9
PABPC1-204ENST00000517990 MIER1Q8N108 512 aa9.42□□□□□ -0.9
PABPC1-204ENST00000517990 FNBP4Q8N3X1 1017 aaPredicted RBP9.42□□□□□ -0.9
PABPC1-204ENST00000517990 NALCNQ8IZF0 1738 aa9.42□□□□□ -0.9
PABPC1-204ENST00000517990 LRPPRCP42704 1394 aaKnown RBP9.41□□□□□ -0.9
PABPC1-204ENST00000517990 NPHP3Q7Z494 1330 aa9.41□□□□□ -0.9
PABPC1-204ENST00000517990 SF3B2Q13435 895 aaKnown RBP9.41□□□□□ -0.9
PABPC1-204ENST00000517990 LAMC1P11047 1609 aa9.41□□□□□ -0.9
PABPC1-204ENST00000517990 ATRNO75882 1429 aa9.4□□□□□ -0.9
PABPC1-204ENST00000517990 KIF1BO60333 1816 aa9.4□□□□□ -0.91
PABPC1-204ENST00000517990 RIMBP2O15034 1052 aa9.39□□□□□ -0.91
PABPC1-204ENST00000517990 ITGAEP38570 1179 aa9.39□□□□□ -0.91
PABPC1-204ENST00000517990 ORAI2Q96SN7 254 aa9.39□□□□□ -0.91
PABPC1-204ENST00000517990 SRCAPQ6ZRS2 3230 aa9.39□□□□□ -0.91
PABPC1-204ENST00000517990 HFM1A2PYH4 1435 aa9.39□□□□□ -0.91
PABPC1-204ENST00000517990 NEXMIFQ5QGS0 1516 aa9.38□□□□□ -0.91
PABPC1-204ENST00000517990 ESCO1Q5FWF5 840 aa9.38□□□□□ -0.91
PABPC1-204ENST00000517990 GJD4Q96KN9 370 aaPredicted RBP9.38□□□□□ -0.91
PABPC1-204ENST00000517990 COL22A1Q8NFW1 1626 aaPredicted RBP9.38□□□□□ -0.91
PABPC1-204ENST00000517990 RPGRIP1LQ68CZ1 1315 aa9.37□□□□□ -0.91
PABPC1-204ENST00000517990 MKRN3Q13064 507 aaKnown RBP9.37□□□□□ -0.91
PABPC1-204ENST00000517990 BLMP54132 1417 aaPredicted RBP9.36□□□□□ -0.91
PABPC1-204ENST00000517990 MARF1Q9Y4F3 1742 aaKnown RBP9.36□□□□□ -0.91
PABPC1-204ENST00000517990 ROBO2Q9HCK4 1378 aa9.36□□□□□ -0.91
PABPC1-204ENST00000517990 MYOM2P54296 1465 aa9.35□□□□□ -0.91
PABPC1-204ENST00000517990 CLTCL1P53675 1640 aa9.35□□□□□ -0.91
PABPC1-204ENST00000517990 HAP1P54257 671 aaPredicted RBP9.35□□□□□ -0.91
PABPC1-204ENST00000517990 PRAG1Q86YV5 1406 aa9.35□□□□□ -0.91
PABPC1-204ENST00000517990 UNC5CLQ8IV45 518 aa9.35□□□□□ -0.91
PABPC1-204ENST00000517990 BCL9LQ86UU0 1499 aa9.34□□□□□ -0.91
PABPC1-204ENST00000517990 FOXO3O43524 673 aa9.34□□□□□ -0.91
PABPC1-204ENST00000517990 GOLGA2Q08379 1002 aa9.34□□□□□ -0.91
PABPC1-204ENST00000517990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.34□□□□□ -0.91
PABPC1-204ENST00000517990 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.34□□□□□ -0.92
PABPC1-204ENST00000517990 CDC42BPGQ6DT37 1551 aa9.33□□□□□ -0.92
PABPC1-204ENST00000517990 EP400Q96L91 3159 aa9.33□□□□□ -0.92
PABPC1-204ENST00000517990 RGS20O76081 388 aa9.33□□□□□ -0.92
PABPC1-204ENST00000517990 NUBP1P53384 320 aa9.32□□□□□ -0.92
PABPC1-204ENST00000517990 LSM11P83369 360 aaKnown RBP eCLIP9.32□□□□□ -0.92
PABPC1-204ENST00000517990 PSME1Q06323 249 aa9.32□□□□□ -0.92
PABPC1-204ENST00000517990 CCDC9Q9Y3X0 531 aaKnown RBP9.32□□□□□ -0.92
PABPC1-204ENST00000517990 PXDNQ92626 1479 aa9.32□□□□□ -0.92
PABPC1-204ENST00000517990 CCDC144AA2RUR9 1427 aa9.31□□□□□ -0.92
PABPC1-204ENST00000517990 BAG6P46379 1132 aa9.31□□□□□ -0.92
PABPC1-204ENST00000517990 XPCQ01831 940 aaPredicted RBP9.31□□□□□ -0.92
PABPC1-204ENST00000517990 FAM212AQ96EL1 285 aa9.31□□□□□ -0.92
PABPC1-204ENST00000517990 RALGAPBQ86X10 1494 aa9.31□□□□□ -0.92
PABPC1-204ENST00000517990 SEPT12Q8IYM1 358 aa9.3□□□□□ -0.92
PABPC1-204ENST00000517990 SLIT2O94813 1529 aa9.3□□□□□ -0.92
PABPC1-204ENST00000517990 NAIPQ13075 1403 aa9.3□□□□□ -0.92
PABPC1-204ENST00000517990 SPATA31A3Q5VYP0 1347 aa9.3□□□□□ -0.92
PABPC1-204ENST00000517990 KIF1AQ12756 1690 aa9.29□□□□□ -0.92
PABPC1-204ENST00000517990 A0A0G2JS52 829 aa9.29□□□□□ -0.92
PABPC1-204ENST00000517990 NUTM2FA1L443 756 aa9.29□□□□□ -0.92
PABPC1-204ENST00000517990 G3V3G9 751 aa9.29□□□□□ -0.92
PABPC1-204ENST00000517990 MYT1Q01538 1121 aa9.29□□□□□ -0.92
PABPC1-204ENST00000517990 VPS72Q15906 364 aa9.29□□□□□ -0.92
PABPC1-204ENST00000517990 DCAF8Q5TAQ9 597 aa9.29□□□□□ -0.92
PABPC1-204ENST00000517990 KRT27Q7Z3Y8 459 aa9.29□□□□□ -0.92
PABPC1-204ENST00000517990 DEFB132Q7Z7B7 95 aa9.29□□□□□ -0.92
PABPC1-204ENST00000517990 PCDHB8Q9UN66 801 aa9.29□□□□□ -0.92
PABPC1-204ENST00000517990 LRP5O75197 1615 aa9.29□□□□□ -0.92
PABPC1-204ENST00000517990 PPLO60437 1756 aa9.29□□□□□ -0.92
PABPC1-204ENST00000517990 USP32Q8NFA0 1604 aa9.28□□□□□ -0.92
PABPC1-204ENST00000517990 KRT28Q7Z3Y7 464 aa9.28□□□□□ -0.92
PABPC1-204ENST00000517990 STK26Q9P289 416 aa9.28□□□□□ -0.92
PABPC1-204ENST00000517990 GLI3P10071 1580 aa9.28□□□□□ -0.92
PABPC1-204ENST00000517990 LMOD2Q6P5Q4 547 aa9.27□□□□□ -0.93
PABPC1-204ENST00000517990 TECPR2O15040 1411 aa9.27□□□□□ -0.93
PABPC1-204ENST00000517990 BRWD3Q6RI45 1802 aa9.26□□□□□ -0.93
PABPC1-204ENST00000517990 ARHGEF10O15013 1369 aa9.26□□□□□ -0.93
PABPC1-204ENST00000517990 ANKRD30BQ9BXX2 1392 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms