RNA–Protein interactions for RNA: ENST00000517957.1

PDGFRB-204, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 4

Gene PDGFRB, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-204ENST00000517957 PPIP5K1Q6PFW1 1433 aa17.84■□□□□ 0.45
PDGFRB-204ENST00000517957 FAM83GA6ND36 823 aa17.84■□□□□ 0.45
PDGFRB-204ENST00000517957 SLIT2O94813 1529 aa17.83■□□□□ 0.45
PDGFRB-204ENST00000517957 RGS12O14924 1447 aa17.83■□□□□ 0.45
PDGFRB-204ENST00000517957 ABTB2Q8N961 1025 aa17.83■□□□□ 0.44
PDGFRB-204ENST00000517957 UPF1Q92900 1129 aaKnown RBP eCLIP17.83■□□□□ 0.44
PDGFRB-204ENST00000517957 CABP1Q9NZU7 370 aa17.83■□□□□ 0.44
PDGFRB-204ENST00000517957 CCDC9Q9Y3X0 531 aaKnown RBP17.83■□□□□ 0.44
PDGFRB-204ENST00000517957 ALS2Q96Q42 1657 aa17.83■□□□□ 0.44
PDGFRB-204ENST00000517957 NUTM2GQ5VZR2 741 aa17.81■□□□□ 0.44
PDGFRB-204ENST00000517957 TOPAZ1Q8N9V7 1692 aa17.8■□□□□ 0.44
PDGFRB-204ENST00000517957 VPS72Q15906 364 aa17.8■□□□□ 0.44
PDGFRB-204ENST00000517957 PCGF6Q9BYE7 350 aa17.8■□□□□ 0.44
PDGFRB-204ENST00000517957 PRDM11Q9NQV5 511 aa17.79■□□□□ 0.44
PDGFRB-204ENST00000517957 BTG4Q9NY30 223 aa17.79■□□□□ 0.44
PDGFRB-204ENST00000517957 ABCA3Q99758 1704 aa17.78■□□□□ 0.44
PDGFRB-204ENST00000517957 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.78■□□□□ 0.44
PDGFRB-204ENST00000517957 NLRP13Q86W25 1043 aa17.78■□□□□ 0.44
PDGFRB-204ENST00000517957 ZNF692Q9BU19 519 aaPredicted RBP17.78■□□□□ 0.44
PDGFRB-204ENST00000517957 BRD4O60885 1362 aaPredicted RBP17.78■□□□□ 0.44
PDGFRB-204ENST00000517957 RALGAPBQ86X10 1494 aa17.77■□□□□ 0.44
PDGFRB-204ENST00000517957 NWD2Q9ULI1 1742 aa17.76■□□□□ 0.43
PDGFRB-204ENST00000517957 ZC3H6P61129 1189 aaKnown RBP17.76■□□□□ 0.43
PDGFRB-204ENST00000517957 ATAD2Q6PL18 1390 aa17.76■□□□□ 0.43
PDGFRB-204ENST00000517957 PLCH1Q4KWH8 1693 aa17.74■□□□□ 0.43
PDGFRB-204ENST00000517957 KIAA0232Q92628 1395 aa17.74■□□□□ 0.43
PDGFRB-204ENST00000517957 SBNO2Q9Y2G9 1366 aa17.74■□□□□ 0.43
PDGFRB-204ENST00000517957 COL14A1Q05707 1796 aaKnown RBP17.74■□□□□ 0.43
PDGFRB-204ENST00000517957 NLRP6P59044 892 aa17.73■□□□□ 0.43
PDGFRB-204ENST00000517957 CHRNA2Q15822 529 aa17.73■□□□□ 0.43
PDGFRB-204ENST00000517957 USP6P35125 1406 aa17.72■□□□□ 0.43
PDGFRB-204ENST00000517957 A0A0G2JS52 829 aa17.72■□□□□ 0.43
PDGFRB-204ENST00000517957 SLC24A1O60721 1099 aa17.72■□□□□ 0.43
PDGFRB-204ENST00000517957 EVA1CP58658 441 aa17.72■□□□□ 0.43
PDGFRB-204ENST00000517957 MYT1Q01538 1121 aa17.72■□□□□ 0.43
PDGFRB-204ENST00000517957 SEPT12Q8IYM1 358 aa17.72■□□□□ 0.43
PDGFRB-204ENST00000517957 CLSPNQ9HAW4 1339 aa17.72■□□□□ 0.43
PDGFRB-204ENST00000517957 GLI3P10071 1580 aa17.71■□□□□ 0.43
PDGFRB-204ENST00000517957 ONECUT3O60422 494 aaPredicted RBP17.71■□□□□ 0.43
PDGFRB-204ENST00000517957 GCP02774 474 aa17.71■□□□□ 0.43
PDGFRB-204ENST00000517957 TMC1Q8TDI8 760 aa17.71■□□□□ 0.43
PDGFRB-204ENST00000517957 TIMELESSQ9UNS1 1208 aa17.71■□□□□ 0.43
PDGFRB-204ENST00000517957 CRYBG1Q9Y4K1 1723 aa17.71■□□□□ 0.43
PDGFRB-204ENST00000517957 STRN4Q9NRL3 753 aa17.7■□□□□ 0.42
PDGFRB-204ENST00000517957 USP19O94966 1318 aa17.7■□□□□ 0.42
PDGFRB-204ENST00000517957 ST20-MTHFSA0A0A6YYL1 179 aa17.69■□□□□ 0.42
PDGFRB-204ENST00000517957 FAM98CQ17RN3 349 aaKnown RBP17.69■□□□□ 0.42
PDGFRB-204ENST00000517957 TTC21BQ7Z4L5 1316 aa17.69■□□□□ 0.42
PDGFRB-204ENST00000517957 PHRF1Q9P1Y6 1649 aaKnown RBP17.69■□□□□ 0.42
PDGFRB-204ENST00000517957 CCDC125Q86Z20 511 aa17.68■□□□□ 0.42
PDGFRB-204ENST00000517957 SPATA31A5Q5VU36 1347 aa17.68■□□□□ 0.42
PDGFRB-204ENST00000517957 SPATA31A7Q8IWB4 1347 aa17.68■□□□□ 0.42
PDGFRB-204ENST00000517957 KTN1Q86UP2 1357 aaKnown RBP17.67■□□□□ 0.42
PDGFRB-204ENST00000517957 ZBTB7CA1YPR0 619 aa17.67■□□□□ 0.42
PDGFRB-204ENST00000517957 HDGFL2Q7Z4V5 671 aaPredicted RBP17.67■□□□□ 0.42
PDGFRB-204ENST00000517957 PUS7Q96PZ0 661 aaKnown RBP17.67■□□□□ 0.42
PDGFRB-204ENST00000517957 TTC21AQ8NDW8 1320 aa17.67■□□□□ 0.42
PDGFRB-204ENST00000517957 SSH2Q76I76 1423 aa17.66■□□□□ 0.42
PDGFRB-204ENST00000517957 KRT27Q7Z3Y8 459 aa17.66■□□□□ 0.42
PDGFRB-204ENST00000517957 NRAPQ86VF7 1730 aa17.66■□□□□ 0.42
PDGFRB-204ENST00000517957 CPDO75976 1380 aa17.66■□□□□ 0.42
PDGFRB-204ENST00000517957 CCER1Q8TC90 406 aaPredicted RBP17.65■□□□□ 0.42
PDGFRB-204ENST00000517957 SLC12A5Q9H2X9 1139 aa17.65■□□□□ 0.42
PDGFRB-204ENST00000517957 TERF2IPQ9NYB0 399 aa17.65■□□□□ 0.42
PDGFRB-204ENST00000517957 CPSF1Q10570 1443 aaKnown RBP17.64■□□□□ 0.42
PDGFRB-204ENST00000517957 KCNH5Q8NCM2 988 aa17.64■□□□□ 0.41
PDGFRB-204ENST00000517957 TESK2Q96S53 571 aa17.64■□□□□ 0.41
PDGFRB-204ENST00000517957 NRKQ7Z2Y5 1582 aa17.63■□□□□ 0.41
PDGFRB-204ENST00000517957 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.63■□□□□ 0.41
PDGFRB-204ENST00000517957 USP35Q9P2H5 1018 aa17.63■□□□□ 0.41
PDGFRB-204ENST00000517957 SPATA31A1Q5TZJ5 1347 aa17.63■□□□□ 0.41
PDGFRB-204ENST00000517957 AKAP12Q02952 1782 aa17.63■□□□□ 0.41
PDGFRB-204ENST00000517957 BRWD3Q6RI45 1802 aa17.63■□□□□ 0.41
PDGFRB-204ENST00000517957 SOX12O15370 315 aa17.61■□□□□ 0.41
PDGFRB-204ENST00000517957 TMF1P82094 1093 aa17.61■□□□□ 0.41
PDGFRB-204ENST00000517957 SF3B2Q13435 895 aaKnown RBP17.61■□□□□ 0.41
PDGFRB-204ENST00000517957 USP47Q96K76 1375 aa17.61■□□□□ 0.41
PDGFRB-204ENST00000517957 LARP1Q6PKG0 1096 aaKnown RBP17.6■□□□□ 0.41
PDGFRB-204ENST00000517957 CAMTA1Q9Y6Y1 1673 aa17.6■□□□□ 0.41
PDGFRB-204ENST00000517957 EP400Q96L91 3159 aa17.6■□□□□ 0.41
PDGFRB-204ENST00000517957 PIK3C2AO00443 1686 aa17.59■□□□□ 0.41
PDGFRB-204ENST00000517957 AATKQ6ZMQ8 1374 aa17.59■□□□□ 0.41
PDGFRB-204ENST00000517957 SLIT3O75094 1523 aa17.58■□□□□ 0.41
PDGFRB-204ENST00000517957 CDCA8Q53HL2 280 aa17.58■□□□□ 0.4
PDGFRB-204ENST00000517957 BARGINQ6ZT62 677 aa17.58■□□□□ 0.4
PDGFRB-204ENST00000517957 TCP11L2Q8N4U5 519 aa17.58■□□□□ 0.4
PDGFRB-204ENST00000517957 BLMP54132 1417 aaPredicted RBP17.57■□□□□ 0.4
PDGFRB-204ENST00000517957 NINLQ9Y2I6 1382 aa17.57■□□□□ 0.4
PDGFRB-204ENST00000517957 ARHGEF25Q86VW2 580 aa17.57■□□□□ 0.4
PDGFRB-204ENST00000517957 THRAP3Q9Y2W1 955 aaKnown RBP17.57■□□□□ 0.4
PDGFRB-204ENST00000517957 MON2Q7Z3U7 1717 aa17.56■□□□□ 0.4
PDGFRB-204ENST00000517957 NME9Q86XW9 330 aa17.56■□□□□ 0.4
PDGFRB-204ENST00000517957 CD163L1Q9NR16 1453 aa17.56■□□□□ 0.4
PDGFRB-204ENST00000517957 LMO7Q8WWI1 1683 aa17.55■□□□□ 0.4
PDGFRB-204ENST00000517957 PDE3BQ13370 1112 aa17.55■□□□□ 0.4
PDGFRB-204ENST00000517957 TOM1L2Q6ZVM7 507 aa17.55■□□□□ 0.4
PDGFRB-204ENST00000517957 ZRANB1Q9UGI0 708 aa17.55■□□□□ 0.4
PDGFRB-204ENST00000517957 EDC4Q6P2E9 1401 aaKnown RBP17.55■□□□□ 0.4
PDGFRB-204ENST00000517957 A0A1W2PP64 1363 aa17.54■□□□□ 0.4
PDGFRB-204ENST00000517957 USP31Q70CQ4 1352 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms