RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 SAMD9Q5K651 1589 aa4.26□□□□□ -1.73
SKP1-204ENST00000517691 ASXL2Q76L83 1435 aa4.26□□□□□ -1.73
SKP1-204ENST00000517691 SPDYE16A6NNV3 312 aaPredicted RBP4.26□□□□□ -1.73
SKP1-204ENST00000517691 GPR37O15354 613 aa4.26□□□□□ -1.73
SKP1-204ENST00000517691 CDK11AQ9UQ88 783 aaPredicted RBP4.26□□□□□ -1.73
SKP1-204ENST00000517691 EIF5BO60841 1220 aaKnown RBP4.25□□□□□ -1.73
SKP1-204ENST00000517691 PROX2Q3B8N5 592 aa4.25□□□□□ -1.73
SKP1-204ENST00000517691 KANK3Q6NY19 840 aa4.25□□□□□ -1.73
SKP1-204ENST00000517691 ANKLE1Q8NAG6 615 aa4.25□□□□□ -1.73
SKP1-204ENST00000517691 ABCA8O94911 1581 aa4.25□□□□□ -1.73
SKP1-204ENST00000517691 ATP10BO94823 1461 aa4.25□□□□□ -1.73
SKP1-204ENST00000517691 TRIM66O15016 1216 aa4.24□□□□□ -1.73
SKP1-204ENST00000517691 KRI1Q8N9T8 703 aaKnown RBP4.24□□□□□ -1.73
SKP1-204ENST00000517691 NKX2-3Q8TAU0 364 aa4.24□□□□□ -1.73
SKP1-204ENST00000517691 OXER1Q8TDS5 423 aa4.24□□□□□ -1.73
SKP1-204ENST00000517691 ADAM33Q9BZ11 813 aa4.24□□□□□ -1.73
SKP1-204ENST00000517691 KDM5BQ9UGL1 1544 aa4.24□□□□□ -1.73
SKP1-204ENST00000517691 NUP153P49790 1475 aaKnown RBP4.23□□□□□ -1.73
SKP1-204ENST00000517691 ABCC10Q5T3U5 1492 aa4.23□□□□□ -1.73
SKP1-204ENST00000517691 RAPGEF6Q8TEU7 1601 aa4.23□□□□□ -1.73
SKP1-204ENST00000517691 MAPKBP1O60336 1514 aa4.23□□□□□ -1.73
SKP1-204ENST00000517691 RNF223E7ERA6 249 aa4.23□□□□□ -1.73
SKP1-204ENST00000517691 IL27Q8NEV9 243 aa4.23□□□□□ -1.73
SKP1-204ENST00000517691 KDM4CQ9H3R0 1056 aa4.23□□□□□ -1.73
SKP1-204ENST00000517691 CASKIN1Q8WXD9 1431 aa4.23□□□□□ -1.73
SKP1-204ENST00000517691 MSTNO14793 375 aa4.22□□□□□ -1.73
SKP1-204ENST00000517691 PDE4DQ08499 809 aa4.22□□□□□ -1.73
SKP1-204ENST00000517691 ZCCHC11Q5TAX3 1644 aaKnown RBP4.22□□□□□ -1.73
SKP1-204ENST00000517691 WDR7Q9Y4E6 1490 aa4.22□□□□□ -1.73
SKP1-204ENST00000517691 ZMYND15Q9H091 742 aa4.22□□□□□ -1.73
SKP1-204ENST00000517691 C1orf115Q9H7X2 142 aa4.22□□□□□ -1.73
SKP1-204ENST00000517691 EPRSP07814 1512 aaKnown RBP4.22□□□□□ -1.73
SKP1-204ENST00000517691 CDK13Q14004 1512 aaKnown RBP4.22□□□□□ -1.73
SKP1-204ENST00000517691 LIAT1Q6ZQX7 453 aa4.21□□□□□ -1.74
SKP1-204ENST00000517691 TOR4AQ9NXH8 423 aa4.21□□□□□ -1.74
SKP1-204ENST00000517691 CCDC9Q9Y3X0 531 aaKnown RBP4.21□□□□□ -1.74
SKP1-204ENST00000517691 HECW1Q76N89 1606 aa4.21□□□□□ -1.74
SKP1-204ENST00000517691 CD109Q6YHK3 1445 aa4.21□□□□□ -1.74
SKP1-204ENST00000517691 K7ELQ4 463 aaPredicted RBP4.21□□□□□ -1.74
SKP1-204ENST00000517691 OSBPP22059 807 aa4.21□□□□□ -1.74
SKP1-204ENST00000517691 KRTAP5-3Q6L8H2 238 aa4.21□□□□□ -1.74
SKP1-204ENST00000517691 NECTIN2Q92692 538 aa4.21□□□□□ -1.74
SKP1-204ENST00000517691 SEPT9Q9UHD8 586 aaPredicted RBP4.21□□□□□ -1.74
SKP1-204ENST00000517691 MTUS2Q5JR59 1369 aa4.2□□□□□ -1.74
SKP1-204ENST00000517691 VPS8Q8N3P4 1428 aa4.2□□□□□ -1.74
SKP1-204ENST00000517691 FYCO1Q9BQS8 1478 aa4.2□□□□□ -1.74
SKP1-204ENST00000517691 GRXCR2A6NFK2 248 aa4.2□□□□□ -1.74
SKP1-204ENST00000517691 CCDC18Q5T9S5 1454 aa4.2□□□□□ -1.74
SKP1-204ENST00000517691 PCF11O94913 1555 aaKnown RBP4.19□□□□□ -1.74
SKP1-204ENST00000517691 DIP2BQ9P265 1576 aa4.19□□□□□ -1.74
SKP1-204ENST00000517691 EVI5O60447 810 aa4.19□□□□□ -1.74
SKP1-204ENST00000517691 IGSF3O75054 1194 aa4.19□□□□□ -1.74
SKP1-204ENST00000517691 PRIM1P49642 420 aaKnown RBP4.19□□□□□ -1.74
SKP1-204ENST00000517691 MAP3K9P80192 1104 aa4.19□□□□□ -1.74
SKP1-204ENST00000517691 FAM117AQ9C073 453 aa4.19□□□□□ -1.74
SKP1-204ENST00000517691 PKD2L1Q9P0L9 805 aa4.19□□□□□ -1.74
SKP1-204ENST00000517691 ZNF777Q9ULD5 760 aaPredicted RBP4.19□□□□□ -1.74
SKP1-204ENST00000517691 MINK1Q8N4C8 1332 aaPredicted RBP4.19□□□□□ -1.74
SKP1-204ENST00000517691 IRF6O14896 467 aa4.19□□□□□ -1.74
SKP1-204ENST00000517691 PPARGC1BQ86YN6 1023 aaKnown RBP4.19□□□□□ -1.74
SKP1-204ENST00000517691 CYP4X1Q8N118 509 aa4.19□□□□□ -1.74
SKP1-204ENST00000517691 RSPH6AQ9H0K4 717 aa4.19□□□□□ -1.74
SKP1-204ENST00000517691 ADAMTS8Q9UP79 889 aa4.19□□□□□ -1.74
SKP1-204ENST00000517691 ERBB4Q15303 1308 aa4.19□□□□□ -1.74
SKP1-204ENST00000517691 TROQ12816 1431 aaPredicted RBP4.19□□□□□ -1.74
SKP1-204ENST00000517691 PLEKHG3A1L390 1219 aa4.18□□□□□ -1.74
SKP1-204ENST00000517691 NUTM2FA1L443 756 aa4.18□□□□□ -1.74
SKP1-204ENST00000517691 FECHP22830 423 aa4.18□□□□□ -1.74
SKP1-204ENST00000517691 KANK4Q5T7N3 995 aaPredicted RBP4.18□□□□□ -1.74
SKP1-204ENST00000517691 EFCAB2Q5VUJ9 269 aa4.18□□□□□ -1.74
SKP1-204ENST00000517691 TEX14Q8IWB6 1497 aa4.18□□□□□ -1.74
SKP1-204ENST00000517691 GLI2P10070 1586 aa4.18□□□□□ -1.74
SKP1-204ENST00000517691 ZBTB7CA1YPR0 619 aa4.17□□□□□ -1.74
SKP1-204ENST00000517691 RAPGEF3O95398 923 aa4.17□□□□□ -1.74
SKP1-204ENST00000517691 MAP2K5Q13163 448 aa4.17□□□□□ -1.74
SKP1-204ENST00000517691 CCNB3Q8WWL7 1395 aa4.17□□□□□ -1.74
SKP1-204ENST00000517691 DDX12PQ92771 950 aa4.17□□□□□ -1.74
SKP1-204ENST00000517691 CCDC102AQ96A19 550 aa4.17□□□□□ -1.74
SKP1-204ENST00000517691 CFDP1Q9UEE9 299 aaPredicted RBP4.17□□□□□ -1.74
SKP1-204ENST00000517691 PCDHGA10Q9Y5H3 936 aa4.17□□□□□ -1.74
SKP1-204ENST00000517691 VSIG8P0DPA2 414 aa4.17□□□□□ -1.74
SKP1-204ENST00000517691 MAGI3Q5TCQ9 1506 aa4.16□□□□□ -1.74
SKP1-204ENST00000517691 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.16□□□□□ -1.746e-14■□□□□ 8.5
SKP1-204ENST00000517691 PLCH2O75038 1416 aa4.16□□□□□ -1.74
SKP1-204ENST00000517691 GNPATO15228 680 aa4.16□□□□□ -1.74
SKP1-204ENST00000517691 COL9A1P20849 921 aa4.16□□□□□ -1.74
SKP1-204ENST00000517691 AMHR2Q16671 573 aa4.16□□□□□ -1.74
SKP1-204ENST00000517691 TSPOAP1O95153 1857 aa4.16□□□□□ -1.74
SKP1-204ENST00000517691 KIF13AQ9H1H9 1805 aa4.16□□□□□ -1.74
SKP1-204ENST00000517691 FANCAO15360 1455 aa4.16□□□□□ -1.74
SKP1-204ENST00000517691 AKNAQ7Z591 1439 aa4.16□□□□□ -1.74
SKP1-204ENST00000517691 ZPR1O75312 459 aa4.16□□□□□ -1.74
SKP1-204ENST00000517691 FCHSD2O94868 740 aa4.16□□□□□ -1.74
SKP1-204ENST00000517691 PDIA4P13667 645 aaKnown RBP4.16□□□□□ -1.74
SKP1-204ENST00000517691 HNRNPMP52272 730 aaKnown RBP eCLIP4.16□□□□□ -1.74
SKP1-204ENST00000517691 PARP9Q8IXQ6 854 aa4.16□□□□□ -1.74
SKP1-204ENST00000517691 KIF14Q15058 1648 aa4.15□□□□□ -1.74
SKP1-204ENST00000517691 MAP3K4Q9Y6R4 1608 aa4.15□□□□□ -1.74
SKP1-204ENST00000517691 PHLDB1Q86UU1 1377 aa4.15□□□□□ -1.74
SKP1-204ENST00000517691 ZNF644Q9H582 1327 aaPredicted RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms