RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 CABLES1Q8TDN4 633 aa35.04■■■■□ 3.2
PVT1-204ENST00000517525 SLIT2O94813 1529 aa35.03■■■■□ 3.2
PVT1-204ENST00000517525 ATRNO75882 1429 aa35.03■■■■□ 3.2
PVT1-204ENST00000517525 PPIP5K1Q6PFW1 1433 aa35.03■■■■□ 3.2
PVT1-204ENST00000517525 BRD4O60885 1362 aaPredicted RBP35.02■■■■□ 3.2
PVT1-204ENST00000517525 HAP1P54257 671 aaPredicted RBP35■■■■□ 3.19
PVT1-204ENST00000517525 PAK3O75914 559 aaPredicted RBP34.98■■■■□ 3.19
PVT1-204ENST00000517525 UNC5CLQ8IV45 518 aa34.97■■■■□ 3.19
PVT1-204ENST00000517525 ABCA3Q99758 1704 aa34.97■■■■□ 3.19
PVT1-204ENST00000517525 CABP1Q9NZU7 370 aa34.96■■■■□ 3.19
PVT1-204ENST00000517525 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.92■■■■□ 3.18
PVT1-204ENST00000517525 ATAD2Q6PL18 1390 aa34.92■■■■□ 3.18
PVT1-204ENST00000517525 FAM83GA6ND36 823 aa34.91■■■■□ 3.18
PVT1-204ENST00000517525 RGS12O14924 1447 aa34.9■■■■□ 3.18
PVT1-204ENST00000517525 PUS7Q96PZ0 661 aaKnown RBP34.89■■■■□ 3.18
PVT1-204ENST00000517525 CRYBG1Q9Y4K1 1723 aa34.89■■■■□ 3.18
PVT1-204ENST00000517525 GJD4Q96KN9 370 aaPredicted RBP34.88■■■■□ 3.17
PVT1-204ENST00000517525 USP6P35125 1406 aa34.88■■■■□ 3.17
PVT1-204ENST00000517525 ZNF692Q9BU19 519 aaPredicted RBP34.87■■■■□ 3.17
PVT1-204ENST00000517525 SSH2Q76I76 1423 aa34.87■■■■□ 3.17
PVT1-204ENST00000517525 SLC24A1O60721 1099 aa34.86■■■■□ 3.17
PVT1-204ENST00000517525 NWD2Q9ULI1 1742 aa34.86■■■■□ 3.17
PVT1-204ENST00000517525 VPS72Q15906 364 aa34.85■■■■□ 3.17
PVT1-204ENST00000517525 ABTB2Q8N961 1025 aa34.85■■■■□ 3.17
PVT1-204ENST00000517525 USP19O94966 1318 aa34.84■■■■□ 3.17
PVT1-204ENST00000517525 PLEKHG5O94827 1062 aa34.84■■■■□ 3.17
PVT1-204ENST00000517525 TESK2Q96S53 571 aa34.82■■■■□ 3.16
PVT1-204ENST00000517525 CPSF1Q10570 1443 aaKnown RBP34.81■■■■□ 3.16
PVT1-204ENST00000517525 NLRP13Q86W25 1043 aa34.81■■■■□ 3.16
PVT1-204ENST00000517525 COL14A1Q05707 1796 aaKnown RBP34.79■■■■□ 3.16
PVT1-204ENST00000517525 PLCH1Q4KWH8 1693 aa34.79■■■■□ 3.16
PVT1-204ENST00000517525 ST20-MTHFSA0A0A6YYL1 179 aa34.78■■■■□ 3.16
PVT1-204ENST00000517525 NUTM2GQ5VZR2 741 aa34.77■■■■□ 3.16
PVT1-204ENST00000517525 PRDM11Q9NQV5 511 aa34.77■■■■□ 3.16
PVT1-204ENST00000517525 BTG4Q9NY30 223 aa34.76■■■■□ 3.16
PVT1-204ENST00000517525 CPDO75976 1380 aa34.75■■■■□ 3.15
PVT1-204ENST00000517525 PHRF1Q9P1Y6 1649 aaKnown RBP34.75■■■■□ 3.15
PVT1-204ENST00000517525 KIAA0232Q92628 1395 aa34.74■■■■□ 3.15
PVT1-204ENST00000517525 GLI3P10071 1580 aa34.74■■■■□ 3.15
PVT1-204ENST00000517525 ONECUT3O60422 494 aaPredicted RBP34.74■■■■□ 3.15
PVT1-204ENST00000517525 UPF1Q92900 1129 aaKnown RBP eCLIP34.74■■■■□ 3.15
PVT1-204ENST00000517525 TTC21BQ7Z4L5 1316 aa34.73■■■■□ 3.15
PVT1-204ENST00000517525 TTC21AQ8NDW8 1320 aa34.72■■■■□ 3.15
PVT1-204ENST00000517525 GCP02774 474 aa34.71■■■■□ 3.15
PVT1-204ENST00000517525 CCER1Q8TC90 406 aaPredicted RBP34.71■■■■□ 3.15
PVT1-204ENST00000517525 NRAPQ86VF7 1730 aa34.71■■■■□ 3.15
PVT1-204ENST00000517525 USP47Q96K76 1375 aa34.71■■■■□ 3.15
PVT1-204ENST00000517525 NRKQ7Z2Y5 1582 aa34.7■■■■□ 3.14
PVT1-204ENST00000517525 AKAP12Q02952 1782 aa34.69■■■■□ 3.14
PVT1-204ENST00000517525 NLRP6P59044 892 aa34.69■■■■□ 3.14
PVT1-204ENST00000517525 ZC3H6P61129 1189 aaKnown RBP34.68■■■■□ 3.14
PVT1-204ENST00000517525 KTN1Q86UP2 1357 aaKnown RBP34.68■■■■□ 3.14
PVT1-204ENST00000517525 CD163L1Q9NR16 1453 aa34.67■■■■□ 3.14
PVT1-204ENST00000517525 NINLQ9Y2I6 1382 aa34.67■■■■□ 3.14
PVT1-204ENST00000517525 SLIT3O75094 1523 aa34.66■■■■□ 3.14
PVT1-204ENST00000517525 SLC12A5Q9H2X9 1139 aa34.64■■■■□ 3.14
PVT1-204ENST00000517525 SPATA31A5Q5VU36 1347 aa34.63■■■■□ 3.13
PVT1-204ENST00000517525 SPATA31A7Q8IWB4 1347 aa34.63■■■■□ 3.13
PVT1-204ENST00000517525 CHRNA2Q15822 529 aa34.63■■■■□ 3.13
PVT1-204ENST00000517525 PIK3C2AO00443 1686 aa34.63■■■■□ 3.13
PVT1-204ENST00000517525 TERF2IPQ9NYB0 399 aa34.62■■■■□ 3.13
PVT1-204ENST00000517525 CCDC9Q9Y3X0 531 aaKnown RBP34.62■■■■□ 3.13
PVT1-204ENST00000517525 HDGFL2Q7Z4V5 671 aaPredicted RBP34.61■■■■□ 3.13
PVT1-204ENST00000517525 TMC1Q8TDI8 760 aa34.61■■■■□ 3.13
PVT1-204ENST00000517525 SEPT12Q8IYM1 358 aa34.6■■■■□ 3.13
PVT1-204ENST00000517525 MON2Q7Z3U7 1717 aa34.6■■■■□ 3.13
PVT1-204ENST00000517525 TMF1P82094 1093 aa34.59■■■■□ 3.13
PVT1-204ENST00000517525 USP31Q70CQ4 1352 aa34.59■■■■□ 3.13
PVT1-204ENST00000517525 KCNH5Q8NCM2 988 aa34.57■■■■□ 3.12
PVT1-204ENST00000517525 LMO7Q8WWI1 1683 aa34.57■■■■□ 3.12
PVT1-204ENST00000517525 EDC4Q6P2E9 1401 aaKnown RBP34.56■■■■□ 3.12
PVT1-204ENST00000517525 AATKQ6ZMQ8 1374 aa34.56■■■■□ 3.12
PVT1-204ENST00000517525 CAMTA1Q9Y6Y1 1673 aa34.56■■■■□ 3.12
PVT1-204ENST00000517525 A0A1W2PP64 1363 aa34.54■■■■□ 3.12
PVT1-204ENST00000517525 SPATA31A1Q5TZJ5 1347 aa34.54■■■■□ 3.12
PVT1-204ENST00000517525 CDCA8Q53HL2 280 aa34.53■■■■□ 3.12
PVT1-204ENST00000517525 ARHGEF25Q86VW2 580 aa34.51■■■■□ 3.12
PVT1-204ENST00000517525 EVA1CP58658 441 aa34.5■■■■□ 3.11
PVT1-204ENST00000517525 FAM98CQ17RN3 349 aaKnown RBP34.5■■■■□ 3.11
PVT1-204ENST00000517525 CCDC125Q86Z20 511 aa34.5■■■■□ 3.11
PVT1-204ENST00000517525 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.49■■■■□ 3.11
PVT1-204ENST00000517525 STRN4Q9NRL3 753 aa34.49■■■■□ 3.11
PVT1-204ENST00000517525 USP54Q70EL1 1684 aa34.49■■■■□ 3.11
PVT1-204ENST00000517525 COL5A2P05997 1499 aaPredicted RBP34.46■■■■□ 3.11
PVT1-204ENST00000517525 BARGINQ6ZT62 677 aa34.46■■■■□ 3.11
PVT1-204ENST00000517525 KRT27Q7Z3Y8 459 aa34.46■■■■□ 3.11
PVT1-204ENST00000517525 NME9Q86XW9 330 aa34.46■■■■□ 3.11
PVT1-204ENST00000517525 ANKRD36BQ8N2N9 1353 aa34.46■■■■□ 3.11
PVT1-204ENST00000517525 NFAT5O94916 1531 aa34.45■■■■□ 3.11
PVT1-204ENST00000517525 LARP1Q6PKG0 1096 aaKnown RBP34.44■■■■□ 3.1
PVT1-204ENST00000517525 ZRANB1Q9UGI0 708 aa34.43■■■■□ 3.1
PVT1-204ENST00000517525 THRAP3Q9Y2W1 955 aaKnown RBP34.43■■■■□ 3.1
PVT1-204ENST00000517525 THSD7AQ9UPZ6 1657 aa34.43■■■■□ 3.1
PVT1-204ENST00000517525 BRWD3Q6RI45 1802 aa34.43■■■■□ 3.1
PVT1-204ENST00000517525 COL18A1P39060 1754 aa34.42■■■■□ 3.1
PVT1-204ENST00000517525 ABCC6O95255 1503 aa34.4■■■■□ 3.1
PVT1-204ENST00000517525 OVOS2A0A0J9YW53 1432 aa34.39■■■■□ 3.1
PVT1-204ENST00000517525 OVOS2Q6IE36 1432 aa34.39■■■■□ 3.1
PVT1-204ENST00000517525 TCP11L2Q8N4U5 519 aa34.39■■■■□ 3.1
PVT1-204ENST00000517525 AXIN2Q9Y2T1 843 aa34.39■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms