RNA–Protein interactions for RNA: ENST00000517402.1

HOXA11-202, Transcript of homeobox A11, humanhuman

TSL 1 (best)

Gene HOXA11, Length 2,137 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-202ENST00000517402 ARHGAP23Q9P227 1491 aa25.79■■□□□ 1.72
HOXA11-202ENST00000517402 PTPRUQ92729 1446 aa25.78■■□□□ 1.72
HOXA11-202ENST00000517402 PRR36Q9H6K5 1346 aa25.78■■□□□ 1.72
HOXA11-202ENST00000517402 ADGRB2O60241 1585 aa25.78■■□□□ 1.72
HOXA11-202ENST00000517402 EID1Q9Y6B2 187 aa25.77■■□□□ 1.72
HOXA11-202ENST00000517402 MON2Q7Z3U7 1717 aa25.77■■□□□ 1.72
HOXA11-202ENST00000517402 EDC4Q6P2E9 1401 aaKnown RBP25.76■■□□□ 1.71
HOXA11-202ENST00000517402 ITSN1Q15811 1721 aa25.75■■□□□ 1.71
HOXA11-202ENST00000517402 NME9Q86XW9 330 aa25.75■■□□□ 1.71
HOXA11-202ENST00000517402 PHF23Q9BUL5 403 aaPredicted RBP25.75■■□□□ 1.71
HOXA11-202ENST00000517402 CCDC61Q9Y6R9 512 aa25.75■■□□□ 1.71
HOXA11-202ENST00000517402 ZRANB1Q9UGI0 708 aa25.74■■□□□ 1.71
HOXA11-202ENST00000517402 AKAP12Q02952 1782 aa25.74■■□□□ 1.71
HOXA11-202ENST00000517402 MAP2P11137 1827 aaKnown RBP25.73■■□□□ 1.71
HOXA11-202ENST00000517402 NUTM2FA1L443 756 aa25.73■■□□□ 1.71
HOXA11-202ENST00000517402 PPM1GO15355 546 aaPredicted RBP25.72■■□□□ 1.71
HOXA11-202ENST00000517402 BCAR3O75815 825 aa25.72■■□□□ 1.71
HOXA11-202ENST00000517402 PNPLA6Q8IY17 1366 aa25.72■■□□□ 1.71
HOXA11-202ENST00000517402 RIMS1Q86UR5 1692 aaKnown RBP25.71■■□□□ 1.71
HOXA11-202ENST00000517402 POLKQ9UBT6 870 aa25.7■■□□□ 1.71
HOXA11-202ENST00000517402 PLEKHF1Q96S99 279 aa25.7■■□□□ 1.7
HOXA11-202ENST00000517402 TOPAZ1Q8N9V7 1692 aa25.69■■□□□ 1.7
HOXA11-202ENST00000517402 DIAPH1O60610 1272 aaKnown RBP25.69■■□□□ 1.7
HOXA11-202ENST00000517402 THEMISQ8N1K5 641 aaPredicted RBP25.68■■□□□ 1.7
HOXA11-202ENST00000517402 AMOTL2Q9Y2J4 779 aa25.68■■□□□ 1.7
HOXA11-202ENST00000517402 CCDC27Q2M243 656 aa25.67■■□□□ 1.7
HOXA11-202ENST00000517402 EMILIN1Q9Y6C2 1016 aa25.67■■□□□ 1.7
HOXA11-202ENST00000517402 CEP170BQ9Y4F5 1589 aaPredicted RBP25.67■■□□□ 1.7
HOXA11-202ENST00000517402 WDR63Q8IWG1 891 aa25.65■■□□□ 1.7
HOXA11-202ENST00000517402 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.65■■□□□ 1.7
HOXA11-202ENST00000517402 LRRC7Q96NW7 1537 aa25.65■■□□□ 1.7
HOXA11-202ENST00000517402 NRKQ7Z2Y5 1582 aa25.64■■□□□ 1.7
HOXA11-202ENST00000517402 TBX22Q9Y458 520 aa25.64■■□□□ 1.69
HOXA11-202ENST00000517402 MAPK8IP3Q9UPT6 1336 aa25.63■■□□□ 1.69
HOXA11-202ENST00000517402 PTCH1Q13635 1447 aa25.62■■□□□ 1.69
HOXA11-202ENST00000517402 DIP2AQ14689 1571 aa25.62■■□□□ 1.69
HOXA11-202ENST00000517402 TMPOP42166 694 aaKnown RBP25.61■■□□□ 1.69
HOXA11-202ENST00000517402 COG3Q96JB2 828 aa25.61■■□□□ 1.69
HOXA11-202ENST00000517402 ACEP12821 1306 aa25.61■■□□□ 1.69
HOXA11-202ENST00000517402 RRS1Q15050 365 aaKnown RBP25.6■■□□□ 1.69
HOXA11-202ENST00000517402 XRN1Q8IZH2 1706 aaKnown RBP25.59■■□□□ 1.69
HOXA11-202ENST00000517402 TRIM35Q9UPQ4 493 aa25.59■■□□□ 1.69
HOXA11-202ENST00000517402 ZNF692Q9BU19 519 aaPredicted RBP25.58■■□□□ 1.69
HOXA11-202ENST00000517402 CDK12Q9NYV4 1490 aaPredicted RBP25.58■■□□□ 1.69
HOXA11-202ENST00000517402 RGPD8O14715 1765 aaPredicted RBP25.57■■□□□ 1.68
HOXA11-202ENST00000517402 NCBP3Q53F19 620 aaKnown RBP25.57■■□□□ 1.68
HOXA11-202ENST00000517402 TSR2Q969E8 191 aaKnown RBP25.57■■□□□ 1.68
HOXA11-202ENST00000517402 AATKQ6ZMQ8 1374 aa25.56■■□□□ 1.68
HOXA11-202ENST00000517402 HMOX1P09601 288 aa25.55■■□□□ 1.68
HOXA11-202ENST00000517402 PRKAR2BP31323 418 aa25.55■■□□□ 1.68
HOXA11-202ENST00000517402 SKAP1Q86WV1 359 aa25.55■■□□□ 1.68
HOXA11-202ENST00000517402 RSPH6AQ9H0K4 717 aa25.55■■□□□ 1.68
HOXA11-202ENST00000517402 TTC21BQ7Z4L5 1316 aa25.55■■□□□ 1.68
HOXA11-202ENST00000517402 USP6P35125 1406 aa25.55■■□□□ 1.68
HOXA11-202ENST00000517402 RARSP54136 660 aaKnown RBP25.55■■□□□ 1.68
HOXA11-202ENST00000517402 BCL2L13Q9BXK5 485 aa25.55■■□□□ 1.68
HOXA11-202ENST00000517402 MYH16Q9H6N6 1097 aa25.55■■□□□ 1.68
HOXA11-202ENST00000517402 PLEKHG3A1L390 1219 aa25.54■■□□□ 1.68
HOXA11-202ENST00000517402 RIPK4P57078 832 aa25.54■■□□□ 1.68
HOXA11-202ENST00000517402 KCNA6P17658 529 aa25.54■■□□□ 1.68
HOXA11-202ENST00000517402 PMFBP1Q8TBY8 1022 aa25.54■■□□□ 1.68
HOXA11-202ENST00000517402 FANCIQ9NVI1 1328 aa25.53■■□□□ 1.68
HOXA11-202ENST00000517402 FCHSD2O94868 740 aa25.53■■□□□ 1.68
HOXA11-202ENST00000517402 FRAT1Q92837 279 aaPredicted RBP25.53■■□□□ 1.68
HOXA11-202ENST00000517402 CANXP27824 592 aaKnown RBP25.52■■□□□ 1.68
HOXA11-202ENST00000517402 IL13P35225 146 aa25.52■■□□□ 1.68
HOXA11-202ENST00000517402 ADAMTSL3P82987 1691 aa25.51■■□□□ 1.67
HOXA11-202ENST00000517402 OVOS2A0A0J9YW53 1432 aa25.51■■□□□ 1.67
HOXA11-202ENST00000517402 OVOS2Q6IE36 1432 aa25.51■■□□□ 1.67
HOXA11-202ENST00000517402 ZNF142P52746 1687 aaPredicted RBP25.5■■□□□ 1.67
HOXA11-202ENST00000517402 KDM2BQ8NHM5 1336 aa25.5■■□□□ 1.67
HOXA11-202ENST00000517402 PANK1Q8TE04 598 aa25.49■■□□□ 1.67
HOXA11-202ENST00000517402 PHACTR3Q96KR7 559 aa25.49■■□□□ 1.67
HOXA11-202ENST00000517402 PNNQ9H307 717 aaKnown RBP25.49■■□□□ 1.67
HOXA11-202ENST00000517402 NALCNQ8IZF0 1738 aa25.48■■□□□ 1.67
HOXA11-202ENST00000517402 TNNQ9UQP3 1299 aa25.48■■□□□ 1.67
HOXA11-202ENST00000517402 SSH2Q76I76 1423 aa25.46■■□□□ 1.67
HOXA11-202ENST00000517402 SOX12O15370 315 aa25.46■■□□□ 1.67
HOXA11-202ENST00000517402 EXOSC9Q06265 439 aaKnown RBP25.46■■□□□ 1.67
HOXA11-202ENST00000517402 COG6Q9Y2V7 657 aa25.46■■□□□ 1.67
HOXA11-202ENST00000517402 PDE3AQ14432 1141 aa25.45■■□□□ 1.66
HOXA11-202ENST00000517402 PEAK1Q9H792 1746 aa25.45■■□□□ 1.66
HOXA11-202ENST00000517402 NEFMP07197 916 aa25.43■■□□□ 1.66
HOXA11-202ENST00000517402 NGDNQ8NEJ9 315 aaKnown RBP25.43■■□□□ 1.66
HOXA11-202ENST00000517402 RLBP1P12271 317 aa25.42■■□□□ 1.66
HOXA11-202ENST00000517402 PIK3R4Q99570 1358 aa25.42■■□□□ 1.66
HOXA11-202ENST00000517402 TCERG1O14776 1098 aaKnown RBP25.42■■□□□ 1.66
HOXA11-202ENST00000517402 ANKLE2Q86XL3 938 aa25.42■■□□□ 1.66
HOXA11-202ENST00000517402 RBM33Q96EV2 1170 aaKnown RBP25.42■■□□□ 1.66
HOXA11-202ENST00000517402 FMN2Q9NZ56 1722 aa25.42■■□□□ 1.66
HOXA11-202ENST00000517402 IL16Q14005 1332 aa25.42■■□□□ 1.66
HOXA11-202ENST00000517402 CHD2O14647 1828 aaKnown RBP25.41■■□□□ 1.66
HOXA11-202ENST00000517402 CENPQQ7L2Z9 268 aaPredicted RBP25.41■■□□□ 1.66
HOXA11-202ENST00000517402 THUMPD2Q9BTF0 503 aaKnown RBP25.41■■□□□ 1.66
HOXA11-202ENST00000517402 DLG5Q8TDM6 1919 aa25.41■■□□□ 1.66
HOXA11-202ENST00000517402 MSH5O43196 834 aa25.4■■□□□ 1.66
HOXA11-202ENST00000517402 NFE2L2Q16236 605 aa25.4■■□□□ 1.66
HOXA11-202ENST00000517402 CLUAP1Q96AJ1 413 aa25.4■■□□□ 1.66
HOXA11-202ENST00000517402 PIK3C2AO00443 1686 aa25.39■■□□□ 1.66
HOXA11-202ENST00000517402 EIF4A2Q14240 407 aaKnown RBP25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms