RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 KCNH2Q12809 1159 aa8.43□□□□□ -1.06
LINC00534-201ENST00000517400 NKX2-3Q8TAU0 364 aa8.43□□□□□ -1.06
LINC00534-201ENST00000517400 ARXQ96QS3 562 aa8.43□□□□□ -1.06
LINC00534-201ENST00000517400 MAP10Q9P2G4 905 aa8.43□□□□□ -1.06
LINC00534-201ENST00000517400 FKBPLQ9UIM3 349 aa8.43□□□□□ -1.06
LINC00534-201ENST00000517400 ZC3H4Q9UPT8 1303 aaKnown RBP8.43□□□□□ -1.06
LINC00534-201ENST00000517400 CTHP32929 405 aa8.42□□□□□ -1.06
LINC00534-201ENST00000517400 POM121CA8CG34 1229 aa8.41□□□□□ -1.06
LINC00534-201ENST00000517400 KCNC4Q03721 635 aa8.41□□□□□ -1.06
LINC00534-201ENST00000517400 ARMC2Q8NEN0 867 aa8.41□□□□□ -1.06
LINC00534-201ENST00000517400 VAC14Q08AM6 782 aa8.4□□□□□ -1.06
LINC00534-201ENST00000517400 CCDC82Q8N4S0 544 aa8.4□□□□□ -1.06
LINC00534-201ENST00000517400 SERPINA10Q9UK55 444 aa8.4□□□□□ -1.06
LINC00534-201ENST00000517400 S1PR4O95977 384 aa8.39□□□□□ -1.07
LINC00534-201ENST00000517400 GPKOWQ92917 476 aaPredicted RBP eCLIP8.39□□□□□ -1.07
LINC00534-201ENST00000517400 GLMNQ92990 594 aa8.38□□□□□ -1.07
LINC00534-201ENST00000517400 CALR3Q96L12 384 aaKnown RBP8.38□□□□□ -1.07
LINC00534-201ENST00000517400 ZBBXA8MT70 800 aa8.37□□□□□ -1.07
LINC00534-201ENST00000517400 RGS20O76081 388 aa8.37□□□□□ -1.07
LINC00534-201ENST00000517400 SOX11P35716 441 aa8.37□□□□□ -1.07
LINC00534-201ENST00000517400 NR1H3Q13133 447 aa8.37□□□□□ -1.07
LINC00534-201ENST00000517400 HDGFL1Q5TGJ6 251 aa8.37□□□□□ -1.07
LINC00534-201ENST00000517400 PTCRAQ6ISU1 281 aaPredicted RBP8.37□□□□□ -1.07
LINC00534-201ENST00000517400 PDXDC2PQ6P474 469 aa8.37□□□□□ -1.07
LINC00534-201ENST00000517400 CCDC24Q8N4L8 307 aa8.37□□□□□ -1.07
LINC00534-201ENST00000517400 CCDC97Q96F63 343 aaPredicted RBP8.37□□□□□ -1.07
LINC00534-201ENST00000517400 ARID3AQ99856 593 aa8.37□□□□□ -1.07
LINC00534-201ENST00000517400 UNC93B1Q9H1C4 597 aa8.37□□□□□ -1.07
LINC00534-201ENST00000517400 ALG2Q9H553 416 aa8.37□□□□□ -1.07
LINC00534-201ENST00000517400 GPSM3Q9Y4H4 160 aa8.37□□□□□ -1.07
LINC00534-201ENST00000517400 NBPF14Q5TI25 921 aa8.36□□□□□ -1.07
LINC00534-201ENST00000517400 ADAMTS19Q8TE59 1207 aa8.36□□□□□ -1.07
LINC00534-201ENST00000517400 FBXO45P0C2W1 286 aa8.35□□□□□ -1.07
LINC00534-201ENST00000517400 EIF4G2P78344 907 aaKnown RBP eCLIP8.35□□□□□ -1.07
LINC00534-201ENST00000517400 FCF1Q9Y324 198 aaKnown RBP8.35□□□□□ -1.07
LINC00534-201ENST00000517400 PTK2Q05397 1052 aa8.34□□□□□ -1.07
LINC00534-201ENST00000517400 GGCXP38435 758 aa8.33□□□□□ -1.08
LINC00534-201ENST00000517400 SEMA3FQ13275 785 aa8.33□□□□□ -1.08
LINC00534-201ENST00000517400 HOMEZQ8IX15 550 aa8.33□□□□□ -1.08
LINC00534-201ENST00000517400 RNF223E7ERA6 249 aa8.32□□□□□ -1.08
LINC00534-201ENST00000517400 PPEF1O14829 653 aaPredicted RBP8.32□□□□□ -1.08
LINC00534-201ENST00000517400 ANKLE1Q8NAG6 615 aa8.32□□□□□ -1.08
LINC00534-201ENST00000517400 OCSTAMPQ9BR26 566 aa8.32□□□□□ -1.08
LINC00534-201ENST00000517400 SH3BP5LQ7L8J4 393 aa8.31□□□□□ -1.08
LINC00534-201ENST00000517400 MCCD1P59942 119 aaPredicted RBP8.3□□□□□ -1.08
LINC00534-201ENST00000517400 PPP1R18Q6NYC8 613 aa8.3□□□□□ -1.08
LINC00534-201ENST00000517400 SH3RF1Q7Z6J0 888 aa8.3□□□□□ -1.08
LINC00534-201ENST00000517400 BAP1Q92560 729 aa8.3□□□□□ -1.08
LINC00534-201ENST00000517400 ZNF592Q92610 1267 aa8.3□□□□□ -1.08
LINC00534-201ENST00000517400 ARHGAP9Q9BRR9 750 aa8.3□□□□□ -1.08
LINC00534-201ENST00000517400 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.29□□□□□ -1.08
LINC00534-201ENST00000517400 ZBTB24O43167 697 aaPredicted RBP8.28□□□□□ -1.08
LINC00534-201ENST00000517400 BPHLQ86WA6 291 aaPredicted RBP8.28□□□□□ -1.08
LINC00534-201ENST00000517400 ZNF511Q8NB15 262 aa8.28□□□□□ -1.08
LINC00534-201ENST00000517400 ZBTB33Q86T24 672 aa8.27□□□□□ -1.09
LINC00534-201ENST00000517400 ADAM32Q8TC27 787 aa8.27□□□□□ -1.09
LINC00534-201ENST00000517400 PPP1R12CQ9BZL4 782 aa8.27□□□□□ -1.09
LINC00534-201ENST00000517400 RPIAP49247 311 aa8.26□□□□□ -1.09
LINC00534-201ENST00000517400 SH3BP2P78314 561 aa8.26□□□□□ -1.09
LINC00534-201ENST00000517400 PLA2G2CQ5R387 149 aa8.26□□□□□ -1.09
LINC00534-201ENST00000517400 UCN2Q96RP3 112 aa8.26□□□□□ -1.09
LINC00534-201ENST00000517400 PALM3A6NDB9 673 aaPredicted RBP8.25□□□□□ -1.09
LINC00534-201ENST00000517400 LINC01559Q495D7 138 aa8.25□□□□□ -1.09
LINC00534-201ENST00000517400 CFAP70Q5T0N1 1121 aa8.25□□□□□ -1.09
LINC00534-201ENST00000517400 FOXJ1Q92949 421 aa8.25□□□□□ -1.09
LINC00534-201ENST00000517400 PPP1R15AO75807 674 aaPredicted RBP8.24□□□□□ -1.09
LINC00534-201ENST00000517400 TRIM32Q13049 653 aa8.24□□□□□ -1.09
LINC00534-201ENST00000517400 AGERQ15109 404 aa8.24□□□□□ -1.09
LINC00534-201ENST00000517400 C4orf48Q5BLP8 95 aa8.24□□□□□ -1.09
LINC00534-201ENST00000517400 NFATC2IPQ8NCF5 419 aa8.24□□□□□ -1.09
LINC00534-201ENST00000517400 CEP126Q9P2H0 1117 aa8.24□□□□□ -1.09
LINC00534-201ENST00000517400 PCDHB9Q9Y5E1 797 aa8.24□□□□□ -1.09
LINC00534-201ENST00000517400 MAGEB6P1A0A0J9YX57 407 aa8.23□□□□□ -1.09
LINC00534-201ENST00000517400 WNT7BP56706 349 aa8.23□□□□□ -1.09
LINC00534-201ENST00000517400 ERFEQ4G0M1 354 aa8.23□□□□□ -1.09
LINC00534-201ENST00000517400 C1QTNF2Q9BXJ5 285 aa8.23□□□□□ -1.09
LINC00534-201ENST00000517400 TFIP11Q9UBB9 837 aaKnown RBP8.23□□□□□ -1.09
LINC00534-201ENST00000517400 TBC1D9Q6ZT07 1266 aa8.22□□□□□ -1.09
LINC00534-201ENST00000517400 DZIP3Q86Y13 1208 aaKnown RBP8.22□□□□□ -1.09
LINC00534-201ENST00000517400 PHTF2Q8N3S3 785 aa8.22□□□□□ -1.09
LINC00534-201ENST00000517400 CARD14Q9BXL6 1004 aa8.22□□□□□ -1.09
LINC00534-201ENST00000517400 ATP9BO43861 1147 aa8.21□□□□□ -1.1
LINC00534-201ENST00000517400 CD2BP2O95400 341 aaKnown RBP8.21□□□□□ -1.1
LINC00534-201ENST00000517400 LMOD1P29536 600 aaPredicted RBP8.21□□□□□ -1.1
LINC00534-201ENST00000517400 SRPK2P78362 688 aaKnown RBP8.21□□□□□ -1.1
LINC00534-201ENST00000517400 TRMT44Q8IYL2 757 aaKnown RBP8.21□□□□□ -1.1
LINC00534-201ENST00000517400 IRX2Q9BZI1 471 aaPredicted RBP8.21□□□□□ -1.1
LINC00534-201ENST00000517400 PIK3CDO00329 1044 aa8.2□□□□□ -1.1
LINC00534-201ENST00000517400 VARSP26640 1264 aaKnown RBP8.2□□□□□ -1.1
LINC00534-201ENST00000517400 SKOR1P84550 965 aa8.2□□□□□ -1.1
LINC00534-201ENST00000517400 SLFNL1Q499Z3 407 aa8.2□□□□□ -1.1
LINC00534-201ENST00000517400 LIAT1Q6ZQX7 453 aa8.2□□□□□ -1.1
LINC00534-201ENST00000517400 PBXIP1Q96AQ6 731 aa8.2□□□□□ -1.1
LINC00534-201ENST00000517400 MAFBQ9Y5Q3 323 aaPredicted RBP8.2□□□□□ -1.1
LINC00534-201ENST00000517400 RFX1P22670 979 aa8.19□□□□□ -1.1
LINC00534-201ENST00000517400 EMID1Q96A84 441 aaPredicted RBP8.19□□□□□ -1.1
LINC00534-201ENST00000517400 SLC10A4Q96EP9 437 aa8.19□□□□□ -1.1
LINC00534-201ENST00000517400 CHIC2Q9UKJ5 165 aa8.19□□□□□ -1.1
LINC00534-201ENST00000517400 CDV3Q9UKY7 258 aaKnown RBP8.19□□□□□ -1.1
LINC00534-201ENST00000517400 ACIN1Q9UKV3 1341 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms