RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 SPATA31A7Q8IWB4 1347 aa12.22□□□□□ -0.45
SCARNA20.3-201ENST00000516913 CDK19Q9BWU1 502 aa12.22□□□□□ -0.45
SCARNA20.3-201ENST00000516913 CRYBG1Q9Y4K1 1723 aa12.21□□□□□ -0.45
SCARNA20.3-201ENST00000516913 CCDC9Q9Y3X0 531 aaKnown RBP12.21□□□□□ -0.45
SCARNA20.3-201ENST00000516913 KIAA0232Q92628 1395 aa12.2□□□□□ -0.46
SCARNA20.3-201ENST00000516913 PSDA5PKW4 1024 aaPredicted RBP12.2□□□□□ -0.46
SCARNA20.3-201ENST00000516913 HAP1P54257 671 aaPredicted RBP12.2□□□□□ -0.46
SCARNA20.3-201ENST00000516913 EN1Q05925 392 aaPredicted RBP12.2□□□□□ -0.46
SCARNA20.3-201ENST00000516913 HRCP23327 699 aa12.19□□□□□ -0.46
SCARNA20.3-201ENST00000516913 NBPF8Q3BBV2 869 aa12.19□□□□□ -0.46
SCARNA20.3-201ENST00000516913 NGDNQ8NEJ9 315 aaKnown RBP12.19□□□□□ -0.46
SCARNA20.3-201ENST00000516913 NWD2Q9ULI1 1742 aa12.19□□□□□ -0.46
SCARNA20.3-201ENST00000516913 ACEP12821 1306 aa12.18□□□□□ -0.46
SCARNA20.3-201ENST00000516913 PAK3O75914 559 aaPredicted RBP12.18□□□□□ -0.46
SCARNA20.3-201ENST00000516913 ZC3H6P61129 1189 aaKnown RBP12.18□□□□□ -0.46
SCARNA20.3-201ENST00000516913 POLR3AO14802 1390 aaPredicted RBP12.18□□□□□ -0.46
SCARNA20.3-201ENST00000516913 GPRASP1Q5JY77 1395 aa12.18□□□□□ -0.46
SCARNA20.3-201ENST00000516913 SPATA31A1Q5TZJ5 1347 aa12.17□□□□□ -0.46
SCARNA20.3-201ENST00000516913 PLEKHG3A1L390 1219 aa12.17□□□□□ -0.46
SCARNA20.3-201ENST00000516913 ARHGEF28Q8N1W1 1705 aaKnown RBP12.17□□□□□ -0.46
SCARNA20.3-201ENST00000516913 THSD7AQ9UPZ6 1657 aa12.16□□□□□ -0.46
SCARNA20.3-201ENST00000516913 PRDM11Q9NQV5 511 aa12.16□□□□□ -0.46
SCARNA20.3-201ENST00000516913 CAMTA1Q9Y6Y1 1673 aa12.16□□□□□ -0.46
SCARNA20.3-201ENST00000516913 EZH2Q15910 746 aaKnown RBP12.15□□□□□ -0.46
SCARNA20.3-201ENST00000516913 LARP1Q6PKG0 1096 aaKnown RBP12.15□□□□□ -0.46
SCARNA20.3-201ENST00000516913 CAMKK2Q96RR4 588 aa12.15□□□□□ -0.46
SCARNA20.3-201ENST00000516913 CABP2Q9NPB3 220 aa12.15□□□□□ -0.46
SCARNA20.3-201ENST00000516913 COL14A1Q05707 1796 aaKnown RBP12.15□□□□□ -0.46
SCARNA20.3-201ENST00000516913 PTF1AQ7RTS3 328 aa12.14□□□□□ -0.47
SCARNA20.3-201ENST00000516913 STRN4Q9NRL3 753 aa12.14□□□□□ -0.47
SCARNA20.3-201ENST00000516913 USP19O94966 1318 aa12.13□□□□□ -0.47
SCARNA20.3-201ENST00000516913 UTRNP46939 3433 aa12.13□□□□□ -0.47
SCARNA20.3-201ENST00000516913 SIN3AQ96ST3 1273 aa12.13□□□□□ -0.47
SCARNA20.3-201ENST00000516913 CCDC61Q9Y6R9 512 aa12.13□□□□□ -0.47
SCARNA20.3-201ENST00000516913 A0A0G2JS52 829 aa12.12□□□□□ -0.47
SCARNA20.3-201ENST00000516913 TRIM37O94972 964 aa12.12□□□□□ -0.47
SCARNA20.3-201ENST00000516913 MYT1Q01538 1121 aa12.12□□□□□ -0.47
SCARNA20.3-201ENST00000516913 R3HDM1Q15032 1099 aaKnown RBP12.12□□□□□ -0.47
SCARNA20.3-201ENST00000516913 L3MBTL2Q969R5 705 aa12.12□□□□□ -0.47
SCARNA20.3-201ENST00000516913 STAC3Q96MF2 364 aa12.12□□□□□ -0.47
SCARNA20.3-201ENST00000516913 USP35Q9P2H5 1018 aa12.12□□□□□ -0.47
SCARNA20.3-201ENST00000516913 SSH2Q76I76 1423 aa12.11□□□□□ -0.47
SCARNA20.3-201ENST00000516913 TOPAZ1Q8N9V7 1692 aa12.11□□□□□ -0.47
SCARNA20.3-201ENST00000516913 AXIN2Q9Y2T1 843 aa12.11□□□□□ -0.47
SCARNA20.3-201ENST00000516913 GCP02774 474 aa12.1□□□□□ -0.47
SCARNA20.3-201ENST00000516913 CABP1Q9NZU7 370 aa12.1□□□□□ -0.47
SCARNA20.3-201ENST00000516913 PHRF1Q9P1Y6 1649 aaKnown RBP12.1□□□□□ -0.47
SCARNA20.3-201ENST00000516913 DISP2A7MBM2 1401 aa12.1□□□□□ -0.47
SCARNA20.3-201ENST00000516913 NRKQ7Z2Y5 1582 aa12.09□□□□□ -0.47
SCARNA20.3-201ENST00000516913 CPDO75976 1380 aa12.09□□□□□ -0.47
SCARNA20.3-201ENST00000516913 EIF3AQ14152 1382 aaKnown RBP12.09□□□□□ -0.47
SCARNA20.3-201ENST00000516913 BAG6P46379 1132 aa12.09□□□□□ -0.47
SCARNA20.3-201ENST00000516913 ABTB2Q8N961 1025 aa12.09□□□□□ -0.47
SCARNA20.3-201ENST00000516913 LMO7Q8WWI1 1683 aa12.09□□□□□ -0.47
SCARNA20.3-201ENST00000516913 TNS1Q9HBL0 1735 aaKnown RBP12.08□□□□□ -0.47
SCARNA20.3-201ENST00000516913 SF3B2Q13435 895 aaKnown RBP12.08□□□□□ -0.48
SCARNA20.3-201ENST00000516913 BARGINQ6ZT62 677 aa12.08□□□□□ -0.48
SCARNA20.3-201ENST00000516913 PPIP5K1Q6PFW1 1433 aa12.08□□□□□ -0.48
SCARNA20.3-201ENST00000516913 CENPJQ9HC77 1338 aaPredicted RBP12.07□□□□□ -0.48
SCARNA20.3-201ENST00000516913 LRP5O75197 1615 aa12.05□□□□□ -0.48
SCARNA20.3-201ENST00000516913 APBA3O96018 575 aa12.05□□□□□ -0.48
SCARNA20.3-201ENST00000516913 SRPK2P78362 688 aaKnown RBP12.05□□□□□ -0.48
SCARNA20.3-201ENST00000516913 FAM196AQ6ZSG2 479 aa12.05□□□□□ -0.48
SCARNA20.3-201ENST00000516913 PROM2Q8N271 834 aa12.05□□□□□ -0.48
SCARNA20.3-201ENST00000516913 TCP11L2Q8N4U5 519 aa12.05□□□□□ -0.48
SCARNA20.3-201ENST00000516913 PDGFDQ9GZP0 370 aaPredicted RBP12.05□□□□□ -0.48
SCARNA20.3-201ENST00000516913 COL5A2P05997 1499 aaPredicted RBP12.05□□□□□ -0.48
SCARNA20.3-201ENST00000516913 USP6P35125 1406 aa12.04□□□□□ -0.48
SCARNA20.3-201ENST00000516913 KIAA1210Q9ULL0 1709 aa12.03□□□□□ -0.48
SCARNA20.3-201ENST00000516913 EVA1CP58658 441 aa12.03□□□□□ -0.48
SCARNA20.3-201ENST00000516913 COL18A1P39060 1754 aa12.02□□□□□ -0.48
SCARNA20.3-201ENST00000516913 SLIT3O75094 1523 aa12.02□□□□□ -0.48
SCARNA20.3-201ENST00000516913 NLRP6P59044 892 aa12.02□□□□□ -0.49
SCARNA20.3-201ENST00000516913 ARHGEF25Q86VW2 580 aa12.02□□□□□ -0.49
SCARNA20.3-201ENST00000516913 NLRP13Q86W25 1043 aa12.02□□□□□ -0.49
SCARNA20.3-201ENST00000516913 MARCH10Q8NA82 808 aaPredicted RBP12.02□□□□□ -0.49
SCARNA20.3-201ENST00000516913 ANO8Q9HCE9 1232 aaPredicted RBP12.02□□□□□ -0.49
SCARNA20.3-201ENST00000516913 TTC21BQ7Z4L5 1316 aa12.02□□□□□ -0.49
SCARNA20.3-201ENST00000516913 ITSN1Q15811 1721 aa12.01□□□□□ -0.49
SCARNA20.3-201ENST00000516913 PEAK1Q9H792 1746 aa12.01□□□□□ -0.49
SCARNA20.3-201ENST00000516913 AATKQ6ZMQ8 1374 aa12.01□□□□□ -0.49
SCARNA20.3-201ENST00000516913 RGPD1P0DJD0 1748 aa12□□□□□ -0.49
SCARNA20.3-201ENST00000516913 ZBTB7CA1YPR0 619 aa12□□□□□ -0.49
SCARNA20.3-201ENST00000516913 NEUROD1Q13562 356 aa12□□□□□ -0.49
SCARNA20.3-201ENST00000516913 PIK3C2AO00443 1686 aa12□□□□□ -0.49
SCARNA20.3-201ENST00000516913 PDE3BQ13370 1112 aa11.99□□□□□ -0.49
SCARNA20.3-201ENST00000516913 CPSF1Q10570 1443 aaKnown RBP11.99□□□□□ -0.49
SCARNA20.3-201ENST00000516913 CD163L1Q9NR16 1453 aa11.99□□□□□ -0.49
SCARNA20.3-201ENST00000516913 CRB1P82279 1406 aa11.98□□□□□ -0.49
SCARNA20.3-201ENST00000516913 SOX12O15370 315 aa11.98□□□□□ -0.49
SCARNA20.3-201ENST00000516913 GOLGB1Q14789 3259 aaKnown RBP11.98□□□□□ -0.49
SCARNA20.3-201ENST00000516913 QRICH2Q9H0J4 1663 aa11.97□□□□□ -0.49
SCARNA20.3-201ENST00000516913 KCNQ2O43526 872 aa11.97□□□□□ -0.49
SCARNA20.3-201ENST00000516913 THRAP3Q9Y2W1 955 aaKnown RBP11.97□□□□□ -0.49
SCARNA20.3-201ENST00000516913 NUP188Q5SRE5 1749 aa11.97□□□□□ -0.49
SCARNA20.3-201ENST00000516913 RREB1Q92766 1687 aa11.97□□□□□ -0.49
SCARNA20.3-201ENST00000516913 TRPM1Q7Z4N2 1603 aa11.97□□□□□ -0.49
SCARNA20.3-201ENST00000516913 NFAT5O94916 1531 aa11.96□□□□□ -0.49
SCARNA20.3-201ENST00000516913 WDR17Q8IZU2 1322 aa11.96□□□□□ -0.49
SCARNA20.3-201ENST00000516913 BRD4O60885 1362 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms