RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 ZFAND3Q9H8U3 227 aa2.96□□□□□ -1.94
RNU6-557P-201ENST00000516842 COL8A1P27658 744 aa2.95□□□□□ -1.94
RNU6-557P-201ENST00000516842 MSS51Q4VC12 460 aa2.95□□□□□ -1.94
RNU6-557P-201ENST00000516842 ARTNQ5T4W7 220 aa2.95□□□□□ -1.94
RNU6-557P-201ENST00000516842 NBPF11Q86T75 865 aa2.95□□□□□ -1.94
RNU6-557P-201ENST00000516842 CCDC155Q8N6L0 562 aa2.95□□□□□ -1.94
RNU6-557P-201ENST00000516842 KLF16Q9BXK1 252 aaPredicted RBP2.95□□□□□ -1.94
RNU6-557P-201ENST00000516842 FIGNL2A6NMB9 653 aa2.94□□□□□ -1.94
RNU6-557P-201ENST00000516842 BMP2P12643 396 aa2.94□□□□□ -1.94
RNU6-557P-201ENST00000516842 MMP16P51512 607 aa2.94□□□□□ -1.94
RNU6-557P-201ENST00000516842 SNRPNP63162 240 aaKnown RBP2.94□□□□□ -1.94
RNU6-557P-201ENST00000516842 FZD5Q13467 585 aa2.94□□□□□ -1.94
RNU6-557P-201ENST00000516842 PODNQ7Z5L7 613 aa2.94□□□□□ -1.94
RNU6-557P-201ENST00000516842 NEDD1Q8NHV4 660 aa2.94□□□□□ -1.94
RNU6-557P-201ENST00000516842 ADGRG1Q9Y653 693 aa2.94□□□□□ -1.94
RNU6-557P-201ENST00000516842 SOS2Q07890 1332 aaPredicted RBP2.93□□□□□ -1.94
RNU6-557P-201ENST00000516842 C1QTNF9BB2RNN3 333 aa2.93□□□□□ -1.94
RNU6-557P-201ENST00000516842 PTCRAQ6ISU1 281 aaPredicted RBP2.93□□□□□ -1.94
RNU6-557P-201ENST00000516842 RBM46Q8TBY0 533 aaKnown RBP2.93□□□□□ -1.94
RNU6-557P-201ENST00000516842 ENAMQ9NRM1 1142 aa2.93□□□□□ -1.94
RNU6-557P-201ENST00000516842 ADH1CP00326 375 aa2.92□□□□□ -1.94
RNU6-557P-201ENST00000516842 YBX3P16989 372 aaKnown RBP eCLIP2.92□□□□□ -1.94
RNU6-557P-201ENST00000516842 ATP6V1AP38606 617 aa2.92□□□□□ -1.94
RNU6-557P-201ENST00000516842 GAS6Q14393 721 aa2.92□□□□□ -1.94
RNU6-557P-201ENST00000516842 LCE4AQ5TA78 99 aa2.92□□□□□ -1.94
RNU6-557P-201ENST00000516842 GTPBP6O43824 516 aaPredicted RBP2.91□□□□□ -1.94
RNU6-557P-201ENST00000516842 DXOO77932 396 aaKnown RBP2.91□□□□□ -1.94
RNU6-557P-201ENST00000516842 ZIC2O95409 532 aaPredicted RBP2.91□□□□□ -1.94
RNU6-557P-201ENST00000516842 ITGA6P23229 1130 aa2.91□□□□□ -1.94
RNU6-557P-201ENST00000516842 SH3BP2P78314 561 aa2.91□□□□□ -1.94
RNU6-557P-201ENST00000516842 SRSF11Q05519 484 aaKnown RBP2.91□□□□□ -1.94
RNU6-557P-201ENST00000516842 SV2AQ7L0J3 742 aa2.91□□□□□ -1.94
RNU6-557P-201ENST00000516842 CD163Q86VB7 1156 aa2.91□□□□□ -1.94
RNU6-557P-201ENST00000516842 ITPKCQ96DU7 683 aa2.91□□□□□ -1.94
RNU6-557P-201ENST00000516842 SALL2Q9Y467 1007 aaPredicted RBP2.91□□□□□ -1.94
RNU6-557P-201ENST00000516842 SPDYE16A6NNV3 312 aaPredicted RBP2.9□□□□□ -1.95
RNU6-557P-201ENST00000516842 CHRNA4P43681 627 aa2.9□□□□□ -1.95
RNU6-557P-201ENST00000516842 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.9□□□□□ -1.95
RNU6-557P-201ENST00000516842 LINC00528Q8N1L1 170 aa2.9□□□□□ -1.95
RNU6-557P-201ENST00000516842 SLC35F4A4IF30 521 aa2.89□□□□□ -1.95
RNU6-557P-201ENST00000516842 RDH13Q8NBN7 331 aa2.89□□□□□ -1.95
RNU6-557P-201ENST00000516842 SUV39H2Q9H5I1 410 aa2.89□□□□□ -1.95
RNU6-557P-201ENST00000516842 RYDENQ9NUL5 291 aaKnown RBP2.89□□□□□ -1.95
RNU6-557P-201ENST00000516842 TTLL8A6PVC2 850 aa2.88□□□□□ -1.95
RNU6-557P-201ENST00000516842 NR3C2P08235 984 aa2.88□□□□□ -1.95
RNU6-557P-201ENST00000516842 BCRP11274 1271 aa2.88□□□□□ -1.95
RNU6-557P-201ENST00000516842 GRIN2CQ14957 1233 aa2.88□□□□□ -1.95
RNU6-557P-201ENST00000516842 LINC01559Q495D7 138 aa2.88□□□□□ -1.95
RNU6-557P-201ENST00000516842 MCTP1Q6DN14 999 aa2.88□□□□□ -1.95
RNU6-557P-201ENST00000516842 ACDQ96AP0 544 aa2.88□□□□□ -1.95
RNU6-557P-201ENST00000516842 CUEDC1Q9NWM3 386 aaPredicted RBP2.87□□□□□ -1.95
RNU6-557P-201ENST00000516842 IGF1RP08069 1367 aa2.87□□□□□ -1.95
RNU6-557P-201ENST00000516842 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2.86□□□□□ -1.95
RNU6-557P-201ENST00000516842 GPR25O00155 361 aa2.86□□□□□ -1.95
RNU6-557P-201ENST00000516842 UPP2O95045 317 aa2.86□□□□□ -1.95
RNU6-557P-201ENST00000516842 RSPO4Q2I0M5 234 aaPredicted RBP2.86□□□□□ -1.95
RNU6-557P-201ENST00000516842 MEIOBQ8N635 442 aa2.86□□□□□ -1.95
RNU6-557P-201ENST00000516842 USB1Q9BQ65 265 aaKnown RBP2.86□□□□□ -1.95
RNU6-557P-201ENST00000516842 DNAJC5Q9H3Z4 198 aa2.86□□□□□ -1.95
RNU6-557P-201ENST00000516842 DDX11L8A8MPP1 907 aa2.85□□□□□ -1.95
RNU6-557P-201ENST00000516842 HYAL3O43820 417 aaPredicted RBP2.85□□□□□ -1.95
RNU6-557P-201ENST00000516842 TXKP42681 527 aa2.85□□□□□ -1.95
RNU6-557P-201ENST00000516842 RSPH4AQ5TD94 716 aa2.85□□□□□ -1.95
RNU6-557P-201ENST00000516842 NLRP7Q8WX94 980 aa2.85□□□□□ -1.95
RNU6-557P-201ENST00000516842 SENP3-EIF4A1A0A087X0R7 540 aa2.84□□□□□ -1.95
RNU6-557P-201ENST00000516842 PLEKHG3A1L390 1219 aa2.84□□□□□ -1.95
RNU6-557P-201ENST00000516842 SHISA8B8ZZ34 492 aa2.84□□□□□ -1.95
RNU6-557P-201ENST00000516842 GCGRP47871 477 aa2.84□□□□□ -1.95
RNU6-557P-201ENST00000516842 PTGDRQ13258 359 aa2.84□□□□□ -1.95
RNU6-557P-201ENST00000516842 ARID5BQ14865 1188 aa2.84□□□□□ -1.95
RNU6-557P-201ENST00000516842 BAP1Q92560 729 aa2.84□□□□□ -1.95
RNU6-557P-201ENST00000516842 HLA-CQ95604 372 aa2.84□□□□□ -1.95
RNU6-557P-201ENST00000516842 PAX4O43316 350 aa2.83□□□□□ -1.96
RNU6-557P-201ENST00000516842 PRSS36Q5K4E3 855 aa2.83□□□□□ -1.96
RNU6-557P-201ENST00000516842 CCER1Q8TC90 406 aaPredicted RBP2.83□□□□□ -1.96
RNU6-557P-201ENST00000516842 PXYLP1Q8TE99 480 aa2.83□□□□□ -1.96
RNU6-557P-201ENST00000516842 FMNL2Q96PY5 1086 aa2.83□□□□□ -1.96
RNU6-557P-201ENST00000516842 RRAGCQ9HB90 399 aa2.83□□□□□ -1.96
RNU6-557P-201ENST00000516842 MKL2Q9ULH7 1088 aa2.83□□□□□ -1.96
RNU6-557P-201ENST00000516842 LRP8Q14114 963 aa2.82□□□□□ -1.96
RNU6-557P-201ENST00000516842 NKAPLQ5M9Q1 402 aa2.82□□□□□ -1.96
RNU6-557P-201ENST00000516842 C1orf229Q6ZS94 237 aaPredicted RBP2.82□□□□□ -1.96
RNU6-557P-201ENST00000516842 NUDT12Q9BQG2 462 aa2.82□□□□□ -1.96
RNU6-557P-201ENST00000516842 MBIPQ9NS73 344 aa2.82□□□□□ -1.96
RNU6-557P-201ENST00000516842 OIP5O43482 229 aa2.81□□□□□ -1.96
RNU6-557P-201ENST00000516842 DYRK3O43781 588 aa2.81□□□□□ -1.96
RNU6-557P-201ENST00000516842 VARSP26640 1264 aaKnown RBP2.81□□□□□ -1.96
RNU6-557P-201ENST00000516842 Q3C1V9 767 aa2.81□□□□□ -1.96
RNU6-557P-201ENST00000516842 RIC3Q7Z5B4 369 aa2.81□□□□□ -1.96
RNU6-557P-201ENST00000516842 SYMPKQ92797 1274 aaKnown RBP2.81□□□□□ -1.96
RNU6-557P-201ENST00000516842 COL17A1Q9UMD9 1497 aaPredicted RBP2.8□□□□□ -1.96
RNU6-557P-201ENST00000516842 HOXB4P17483 251 aaPredicted RBP2.8□□□□□ -1.96
RNU6-557P-201ENST00000516842 GRM5P41594 1212 aa2.8□□□□□ -1.96
RNU6-557P-201ENST00000516842 CTSOP43234 321 aaPredicted RBP2.8□□□□□ -1.96
RNU6-557P-201ENST00000516842 LINC00114Q6XXX2 140 aa2.8□□□□□ -1.96
RNU6-557P-201ENST00000516842 ALYREFQ86V81 257 aaKnown RBP2.8□□□□□ -1.96
RNU6-557P-201ENST00000516842 MPNDQ8N594 471 aa2.8□□□□□ -1.96
RNU6-557P-201ENST00000516842 TSEN34Q9BSV6 310 aaKnown RBP2.8□□□□□ -1.96
RNU6-557P-201ENST00000516842 TPSG1Q9NRR2 321 aa2.8□□□□□ -1.96
RNU6-557P-201ENST00000516842 JUNDP17535 347 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms