RNA–Protein interactions for RNA: ENST00000515859.5

TUSC3-213, Transcript of tumor suppressor candidate 3, humanhuman

TSL 5

Gene TUSC3, Length 1,627 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-213ENST00000515859 TTC21AQ8NDW8 1320 aa33.7■■■□□ 2.98
TUSC3-213ENST00000515859 MORC1Q86VD1 984 aa33.69■■■□□ 2.98
TUSC3-213ENST00000515859 PSME1Q06323 249 aa33.68■■■□□ 2.98
TUSC3-213ENST00000515859 NRKQ7Z2Y5 1582 aa33.67■■■□□ 2.98
TUSC3-213ENST00000515859 GGNBP2Q9H3C7 697 aa33.67■■■□□ 2.98
TUSC3-213ENST00000515859 FOXO3O43524 673 aa33.65■■■□□ 2.98
TUSC3-213ENST00000515859 NLRP13Q86W25 1043 aa33.64■■■□□ 2.98
TUSC3-213ENST00000515859 NME9Q86XW9 330 aa33.63■■■□□ 2.97
TUSC3-213ENST00000515859 KIF20BQ96Q89 1820 aa33.62■■■□□ 2.97
TUSC3-213ENST00000515859 BRINP3Q76B58 766 aa33.61■■■□□ 2.97
TUSC3-213ENST00000515859 NPHP3Q7Z494 1330 aa33.6■■■□□ 2.97
TUSC3-213ENST00000515859 PPP2R1AP30153 589 aa33.6■■■□□ 2.97
TUSC3-213ENST00000515859 COG3Q96JB2 828 aa33.6■■■□□ 2.97
TUSC3-213ENST00000515859 ANKRD26Q9UPS8 1709 aa33.59■■■□□ 2.97
TUSC3-213ENST00000515859 KRT28Q7Z3Y7 464 aa33.57■■■□□ 2.96
TUSC3-213ENST00000515859 SCAF1Q9H7N4 1312 aaKnown RBP33.56■■■□□ 2.96
TUSC3-213ENST00000515859 PAK3O75914 559 aaPredicted RBP33.56■■■□□ 2.96
TUSC3-213ENST00000515859 MRS2Q9HD23 443 aa33.56■■■□□ 2.96
TUSC3-213ENST00000515859 USP31Q70CQ4 1352 aa33.55■■■□□ 2.96
TUSC3-213ENST00000515859 ABTB2Q8N961 1025 aa33.53■■■□□ 2.96
TUSC3-213ENST00000515859 TNNT2P45379 298 aaPredicted RBP33.52■■■□□ 2.96
TUSC3-213ENST00000515859 ZRANB1Q9UGI0 708 aa33.52■■■□□ 2.96
TUSC3-213ENST00000515859 IQSEC2Q5JU85 1478 aa33.52■■■□□ 2.96
TUSC3-213ENST00000515859 CCDC184Q52MB2 194 aa33.51■■■□□ 2.96
TUSC3-213ENST00000515859 OVOS2A0A0J9YW53 1432 aa33.51■■■□□ 2.95
TUSC3-213ENST00000515859 OVOS2Q6IE36 1432 aa33.51■■■□□ 2.95
TUSC3-213ENST00000515859 XPCQ01831 940 aaPredicted RBP33.5■■■□□ 2.95
TUSC3-213ENST00000515859 SBNO1A3KN83 1393 aa33.48■■■□□ 2.95
TUSC3-213ENST00000515859 TOM1O60784 492 aa33.48■■■□□ 2.95
TUSC3-213ENST00000515859 NLRP6P59044 892 aa33.48■■■□□ 2.95
TUSC3-213ENST00000515859 PIK3C2AO00443 1686 aa33.47■■■□□ 2.95
TUSC3-213ENST00000515859 AATKQ6ZMQ8 1374 aa33.46■■■□□ 2.95
TUSC3-213ENST00000515859 TRPM3Q9HCF6 1732 aaPredicted RBP33.45■■■□□ 2.95
TUSC3-213ENST00000515859 PXDNQ92626 1479 aa33.44■■■□□ 2.94
TUSC3-213ENST00000515859 DDX17Q92841 729 aaKnown RBP33.44■■■□□ 2.94
TUSC3-213ENST00000515859 MTHFSP49914 203 aa33.42■■■□□ 2.94
TUSC3-213ENST00000515859 SOS2Q07890 1332 aaPredicted RBP33.42■■■□□ 2.94
TUSC3-213ENST00000515859 CERKQ8TCT0 537 aa33.42■■■□□ 2.94
TUSC3-213ENST00000515859 USP54Q70EL1 1684 aa33.42■■■□□ 2.94
TUSC3-213ENST00000515859 NUTM2GQ5VZR2 741 aa33.39■■■□□ 2.93
TUSC3-213ENST00000515859 TNS3Q68CZ2 1445 aa33.37■■■□□ 2.93
TUSC3-213ENST00000515859 SPATA31A3Q5VYP0 1347 aa33.37■■■□□ 2.93
TUSC3-213ENST00000515859 LMOD2Q6P5Q4 547 aa33.37■■■□□ 2.93
TUSC3-213ENST00000515859 PNISRQ8TF01 805 aaKnown RBP33.37■■■□□ 2.93
TUSC3-213ENST00000515859 CFAP53Q96M91 514 aa33.37■■■□□ 2.93
TUSC3-213ENST00000515859 POLKQ9UBT6 870 aa33.36■■■□□ 2.93
TUSC3-213ENST00000515859 NHSL1Q5SYE7 1610 aa33.36■■■□□ 2.93
TUSC3-213ENST00000515859 ARHGEF10O15013 1369 aa33.35■■■□□ 2.93
TUSC3-213ENST00000515859 ROBO1Q9Y6N7 1651 aa33.35■■■□□ 2.93
TUSC3-213ENST00000515859 ALS2Q96Q42 1657 aa33.34■■■□□ 2.93
TUSC3-213ENST00000515859 UBAP1LF5GYI3 381 aa33.34■■■□□ 2.93
TUSC3-213ENST00000515859 KCNH5Q8NCM2 988 aa33.34■■■□□ 2.93
TUSC3-213ENST00000515859 FBLN1P23142 703 aa33.32■■■□□ 2.92
TUSC3-213ENST00000515859 SMG6Q86US8 1419 aaKnown RBP33.32■■■□□ 2.92
TUSC3-213ENST00000515859 MARF1Q9Y4F3 1742 aaKnown RBP33.31■■■□□ 2.92
TUSC3-213ENST00000515859 USP19O94966 1318 aa33.31■■■□□ 2.92
TUSC3-213ENST00000515859 PNPLA6Q8IY17 1366 aa33.3■■■□□ 2.92
TUSC3-213ENST00000515859 FAM9BQ8IZU0 186 aa33.3■■■□□ 2.92
TUSC3-213ENST00000515859 INSRP06213 1382 aa33.29■■■□□ 2.92
TUSC3-213ENST00000515859 AHDC1Q5TGY3 1603 aaPredicted RBP33.29■■■□□ 2.92
TUSC3-213ENST00000515859 RRS1Q15050 365 aaKnown RBP33.29■■■□□ 2.92
TUSC3-213ENST00000515859 MAP2P11137 1827 aaKnown RBP33.29■■■□□ 2.92
TUSC3-213ENST00000515859 EMILIN1Q9Y6C2 1016 aa33.28■■■□□ 2.92
TUSC3-213ENST00000515859 PPM1GO15355 546 aaPredicted RBP33.27■■■□□ 2.92
TUSC3-213ENST00000515859 SOX12O15370 315 aa33.27■■■□□ 2.92
TUSC3-213ENST00000515859 SLIT3O75094 1523 aa33.26■■■□□ 2.91
TUSC3-213ENST00000515859 GCP02774 474 aa33.25■■■□□ 2.91
TUSC3-213ENST00000515859 PIP4K2BP78356 416 aa33.25■■■□□ 2.91
TUSC3-213ENST00000515859 CDK12Q9NYV4 1490 aaPredicted RBP33.25■■■□□ 2.91
TUSC3-213ENST00000515859 LRRC59Q96AG4 307 aaKnown RBP33.24■■■□□ 2.91
TUSC3-213ENST00000515859 KIF24Q5T7B8 1368 aa33.24■■■□□ 2.91
TUSC3-213ENST00000515859 WDR43Q15061 677 aaKnown RBP eCLIP33.24■■■□□ 2.91
TUSC3-213ENST00000515859 MAP3K19Q56UN5 1328 aa33.23■■■□□ 2.91
TUSC3-213ENST00000515859 NFAT5O94916 1531 aa33.21■■■□□ 2.91
TUSC3-213ENST00000515859 DIAPH1O60610 1272 aaKnown RBP33.2■■■□□ 2.9
TUSC3-213ENST00000515859 NUDCQ9Y266 331 aa33.2■■■□□ 2.9
TUSC3-213ENST00000515859 MED1Q15648 1581 aaPredicted RBP33.19■■■□□ 2.9
TUSC3-213ENST00000515859 COL3A1P02461 1466 aaPredicted RBP33.19■■■□□ 2.9
TUSC3-213ENST00000515859 FLT4P35916 1363 aa33.18■■■□□ 2.9
TUSC3-213ENST00000515859 AMPHP49418 695 aa33.18■■■□□ 2.9
TUSC3-213ENST00000515859 ADAMTS8Q9UP79 889 aa33.16■■■□□ 2.9
TUSC3-213ENST00000515859 RTL1A6NKG5 1358 aa33.15■■■□□ 2.9
TUSC3-213ENST00000515859 ARHGEF25Q86VW2 580 aa33.15■■■□□ 2.9
TUSC3-213ENST00000515859 YTHDC1Q96MU7 727 aaKnown RBP33.15■■■□□ 2.9
TUSC3-213ENST00000515859 PLEKHG5O94827 1062 aa33.13■■■□□ 2.89
TUSC3-213ENST00000515859 PHLPP1O60346 1717 aa33.11■■■□□ 2.89
TUSC3-213ENST00000515859 HOXC9P31274 260 aa33.11■■■□□ 2.89
TUSC3-213ENST00000515859 HSP90AB2PQ58FF8 381 aa33.11■■■□□ 2.89
TUSC3-213ENST00000515859 CABLES1Q8TDN4 633 aa33.11■■■□□ 2.89
TUSC3-213ENST00000515859 PEAK1Q9H792 1746 aa33.11■■■□□ 2.89
TUSC3-213ENST00000515859 SHPRHQ149N8 1683 aa33.11■■■□□ 2.89
TUSC3-213ENST00000515859 IP6K1Q92551 441 aa33.1■■■□□ 2.89
TUSC3-213ENST00000515859 PHRF1Q9P1Y6 1649 aaKnown RBP33.1■■■□□ 2.89
TUSC3-213ENST00000515859 IL13P35225 146 aa33.1■■■□□ 2.89
TUSC3-213ENST00000515859 CRYBG1Q9Y4K1 1723 aa33.09■■■□□ 2.89
TUSC3-213ENST00000515859 COL16A1Q07092 1604 aaPredicted RBP33.08■■■□□ 2.89
TUSC3-213ENST00000515859 LTN1O94822 1766 aa33.07■■■□□ 2.88
TUSC3-213ENST00000515859 U2SURPO15042 1029 aaKnown RBP33.06■■■□□ 2.88
TUSC3-213ENST00000515859 U2AF1L5P0DN76 240 aaPredicted RBP33.06■■■□□ 2.88
TUSC3-213ENST00000515859 U2AF1Q01081 240 aaKnown RBP eCLIP33.06■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms