RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 CCDC97Q96F63 343 aaPredicted RBP13.2□□□□□ -0.3
TRIM41-209ENST00000515834 CEBPZQ03701 1054 aaKnown RBP13.19□□□□□ -0.3
TRIM41-209ENST00000515834 IFT57Q9NWB7 429 aa13.19□□□□□ -0.3
TRIM41-209ENST00000515834 PRDM11Q9NQV5 511 aa13.19□□□□□ -0.3
TRIM41-209ENST00000515834 ZNF771Q7L3S4 317 aaPredicted RBP13.19□□□□□ -0.3
TRIM41-209ENST00000515834 NUP133Q8WUM0 1156 aa13.19□□□□□ -0.3
TRIM41-209ENST00000515834 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
TRIM41-209ENST00000515834 PIBF1Q8WXW3 757 aa13.18□□□□□ -0.3
TRIM41-209ENST00000515834 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRIM41-209ENST00000515834 MNS1Q8NEH6 495 aa13.18□□□□□ -0.3
TRIM41-209ENST00000515834 PANK1Q8TE04 598 aa13.18□□□□□ -0.3
TRIM41-209ENST00000515834 MTHFSP49914 203 aa13.18□□□□□ -0.3
TRIM41-209ENST00000515834 SPG7Q9UQ90 795 aa13.18□□□□□ -0.3
TRIM41-209ENST00000515834 CCDC85AQ96PX6 553 aaPredicted RBP13.17□□□□□ -0.3
TRIM41-209ENST00000515834 ZNF219Q9P2Y4 722 aaPredicted RBP13.17□□□□□ -0.3
TRIM41-209ENST00000515834 FANCD2Q9BXW9 1451 aa13.17□□□□□ -0.3
TRIM41-209ENST00000515834 FMNL2Q96PY5 1086 aa13.17□□□□□ -0.3
TRIM41-209ENST00000515834 MAP4K4O95819 1239 aaPredicted RBP13.17□□□□□ -0.3
TRIM41-209ENST00000515834 NEFHP12036 1026 aa13.17□□□□□ -0.3
TRIM41-209ENST00000515834 THEMISQ8N1K5 641 aaPredicted RBP13.17□□□□□ -0.3
TRIM41-209ENST00000515834 PRAM1Q96QH2 718 aa13.17□□□□□ -0.3
TRIM41-209ENST00000515834 ZNF76P36508 570 aa13.17□□□□□ -0.3
TRIM41-209ENST00000515834 SOGA3Q5TF21 947 aa13.17□□□□□ -0.3
TRIM41-209ENST00000515834 NEBLO76041 1014 aa13.17□□□□□ -0.3
TRIM41-209ENST00000515834 NAT10Q9H0A0 1025 aaKnown RBP13.17□□□□□ -0.3
TRIM41-209ENST00000515834 C1orf115Q9H7X2 142 aa13.17□□□□□ -0.3
TRIM41-209ENST00000515834 FKBP4Q02790 459 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRIM41-209ENST00000515834 CCDC57Q2TAC2 916 aa13.16□□□□□ -0.3
TRIM41-209ENST00000515834 CCDC69A6NI79 296 aa13.16□□□□□ -0.3
TRIM41-209ENST00000515834 ANKRD62A6NC57 917 aa13.16□□□□□ -0.3
TRIM41-209ENST00000515834 STK3Q13188 491 aa13.16□□□□□ -0.3
TRIM41-209ENST00000515834 ZNF530Q6P9A1 599 aaPredicted RBP13.16□□□□□ -0.3
TRIM41-209ENST00000515834 TANGO6Q9C0B7 1094 aa13.16□□□□□ -0.3
TRIM41-209ENST00000515834 SMC2O95347 1197 aa13.15□□□□□ -0.3
TRIM41-209ENST00000515834 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.15□□□□□ -0.3
TRIM41-209ENST00000515834 SSBP05455 408 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRIM41-209ENST00000515834 USP5P45974 858 aa13.15□□□□□ -0.3
TRIM41-209ENST00000515834 WDR78Q5VTH9 848 aa13.15□□□□□ -0.3
TRIM41-209ENST00000515834 ADAMTS2O95450 1211 aa13.15□□□□□ -0.3
TRIM41-209ENST00000515834 NACAP1Q9BZK3 213 aa13.15□□□□□ -0.3
TRIM41-209ENST00000515834 PRKAR2BP31323 418 aa13.15□□□□□ -0.3
TRIM41-209ENST00000515834 RAI14Q9P0K7 980 aa13.15□□□□□ -0.3
TRIM41-209ENST00000515834 TEX35Q5T0J7 233 aa13.15□□□□□ -0.31
TRIM41-209ENST00000515834 ZNF644Q9H582 1327 aaPredicted RBP13.15□□□□□ -0.31
TRIM41-209ENST00000515834 ARHGAP5Q13017 1502 aa13.14□□□□□ -0.31
TRIM41-209ENST00000515834 TMEM87AQ8NBN3 555 aa13.14□□□□□ -0.31
TRIM41-209ENST00000515834 SCLT1Q96NL6 688 aa13.14□□□□□ -0.31
TRIM41-209ENST00000515834 SEPT11Q9NVA2 429 aaKnown RBP13.14□□□□□ -0.31
TRIM41-209ENST00000515834 TMOD2Q9NZR1 351 aa13.14□□□□□ -0.31
TRIM41-209ENST00000515834 WIZO95785 1651 aa13.14□□□□□ -0.31
TRIM41-209ENST00000515834 GNAI3P08754 354 aa13.14□□□□□ -0.31
TRIM41-209ENST00000515834 HDGFL1Q5TGJ6 251 aa13.14□□□□□ -0.31
TRIM41-209ENST00000515834 SLC26A8Q96RN1 970 aa13.14□□□□□ -0.31
TRIM41-209ENST00000515834 ANKLE2Q86XL3 938 aa13.14□□□□□ -0.31
TRIM41-209ENST00000515834 MYO6Q9UM54 1294 aa13.14□□□□□ -0.31
TRIM41-209ENST00000515834 ZC3H6P61129 1189 aaKnown RBP13.14□□□□□ -0.31
TRIM41-209ENST00000515834 WDHD1O75717 1129 aaPredicted RBP13.13□□□□□ -0.31
TRIM41-209ENST00000515834 PRKRIP1Q9H875 184 aaPredicted RBP13.13□□□□□ -0.31
TRIM41-209ENST00000515834 FILIP1LQ4L180 1135 aa13.13□□□□□ -0.31
TRIM41-209ENST00000515834 CDC45O75419 566 aa13.13□□□□□ -0.31
TRIM41-209ENST00000515834 AFAP1Q8N556 730 aa13.13□□□□□ -0.31
TRIM41-209ENST00000515834 SULT6B1Q6IMI4 303 aa13.13□□□□□ -0.31
TRIM41-209ENST00000515834 TDO2P48775 406 aa13.12□□□□□ -0.31
TRIM41-209ENST00000515834 ERC1Q8IUD2 1116 aa13.12□□□□□ -0.31
TRIM41-209ENST00000515834 NUCB2P80303 420 aa13.12□□□□□ -0.31
TRIM41-209ENST00000515834 CDK19Q9BWU1 502 aa13.12□□□□□ -0.31
TRIM41-209ENST00000515834 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
TRIM41-209ENST00000515834 ZPR1O75312 459 aa13.11□□□□□ -0.31
TRIM41-209ENST00000515834 C22orf23Q9BZE7 217 aa13.11□□□□□ -0.31
TRIM41-209ENST00000515834 STK38Q15208 465 aa13.11□□□□□ -0.31
TRIM41-209ENST00000515834 SMARCE1Q969G3 411 aa13.11□□□□□ -0.31
TRIM41-209ENST00000515834 KINO60870 393 aaKnown RBP13.11□□□□□ -0.31
TRIM41-209ENST00000515834 LRP2BPQ9P2M1 347 aa13.11□□□□□ -0.31
TRIM41-209ENST00000515834 HIP1O00291 1037 aa13.11□□□□□ -0.31
TRIM41-209ENST00000515834 CFAP70Q5T0N1 1121 aa13.11□□□□□ -0.31
TRIM41-209ENST00000515834 ACBD3Q9H3P7 528 aa13.11□□□□□ -0.31
TRIM41-209ENST00000515834 GNAI2P04899 355 aa13.11□□□□□ -0.31
TRIM41-209ENST00000515834 CHMP5Q9NZZ3 219 aa13.11□□□□□ -0.31
TRIM41-209ENST00000515834 GRM1Q13255 1194 aa13.1□□□□□ -0.31
TRIM41-209ENST00000515834 TRIM22Q8IYM9 498 aa13.1□□□□□ -0.31
TRIM41-209ENST00000515834 TWISTNBQ3B726 338 aaPredicted RBP13.1□□□□□ -0.31
TRIM41-209ENST00000515834 WDR70Q9NW82 654 aa13.1□□□□□ -0.31
TRIM41-209ENST00000515834 IGHMBP2P38935 993 aaKnown RBP13.1□□□□□ -0.31
TRIM41-209ENST00000515834 HSP90B2PQ58FF3 399 aa13.1□□□□□ -0.31
TRIM41-209ENST00000515834 BTBD11A6QL63 1104 aa13.1□□□□□ -0.31
TRIM41-209ENST00000515834 HSP90AA2PQ14568 343 aaPredicted RBP13.09□□□□□ -0.31
TRIM41-209ENST00000515834 SEPT7Q16181 437 aaKnown RBP13.09□□□□□ -0.31
TRIM41-209ENST00000515834 MAP7D2Q96T17 732 aa13.09□□□□□ -0.31
TRIM41-209ENST00000515834 RNF214Q8ND24 703 aa13.09□□□□□ -0.31
TRIM41-209ENST00000515834 DEF6Q9H4E7 631 aa13.09□□□□□ -0.31
TRIM41-209ENST00000515834 ABCF2Q9UG63 623 aa13.09□□□□□ -0.31
TRIM41-209ENST00000515834 CRACR2BQ8N4Y2 399 aaPredicted RBP13.09□□□□□ -0.31
TRIM41-209ENST00000515834 ARGLU1Q9NWB6 273 aaPredicted RBP13.09□□□□□ -0.31
TRIM41-209ENST00000515834 ANKIB1Q9P2G1 1089 aa13.08□□□□□ -0.31
TRIM41-209ENST00000515834 SSR1P43307 286 aaKnown RBP13.08□□□□□ -0.32
TRIM41-209ENST00000515834 ZNF396Q96N95 335 aaPredicted RBP13.08□□□□□ -0.32
TRIM41-209ENST00000515834 TRIM5Q9C035 493 aa13.08□□□□□ -0.32
TRIM41-209ENST00000515834 CABP1Q9NZU7 370 aa13.08□□□□□ -0.32
TRIM41-209ENST00000515834 GAPVD1Q14C86 1478 aa13.07□□□□□ -0.32
TRIM41-209ENST00000515834 NEK4P51957 841 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms