RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 ARHGEF10O15013 1369 aa13.78□□□□□ -0.2
CSNK1A1-206ENST00000515748 CDC42BPGQ6DT37 1551 aa13.78□□□□□ -0.2
CSNK1A1-206ENST00000515748 NRKQ7Z2Y5 1582 aa13.77□□□□□ -0.21
CSNK1A1-206ENST00000515748 ANO8Q9HCE9 1232 aaPredicted RBP13.77□□□□□ -0.21
CSNK1A1-206ENST00000515748 THSD7AQ9UPZ6 1657 aa13.76□□□□□ -0.21
CSNK1A1-206ENST00000515748 HSPA6P17066 643 aa13.76□□□□□ -0.21
CSNK1A1-206ENST00000515748 ANKRD30BQ9BXX2 1392 aa13.75□□□□□ -0.21
CSNK1A1-206ENST00000515748 PLSCR1O15162 318 aa13.75□□□□□ -0.21
CSNK1A1-206ENST00000515748 STK26Q9P289 416 aa13.75□□□□□ -0.21
CSNK1A1-206ENST00000515748 NEXMIFQ5QGS0 1516 aa13.74□□□□□ -0.21
CSNK1A1-206ENST00000515748 SPATA31E1Q6ZUB1 1445 aa13.74□□□□□ -0.21
CSNK1A1-206ENST00000515748 NRAPQ86VF7 1730 aa13.74□□□□□ -0.21
CSNK1A1-206ENST00000515748 CAPN15O75808 1086 aa13.73□□□□□ -0.21
CSNK1A1-206ENST00000515748 SGIP1Q9BQI5 828 aa13.73□□□□□ -0.21
CSNK1A1-206ENST00000515748 BCL11BQ9C0K0 894 aaPredicted RBP13.73□□□□□ -0.21
CSNK1A1-206ENST00000515748 USP35Q9P2H5 1018 aa13.73□□□□□ -0.21
CSNK1A1-206ENST00000515748 ARXQ96QS3 562 aa13.72□□□□□ -0.21
CSNK1A1-206ENST00000515748 STRN4Q9NRL3 753 aa13.72□□□□□ -0.21
CSNK1A1-206ENST00000515748 RPGRIP1LQ68CZ1 1315 aa13.71□□□□□ -0.21
CSNK1A1-206ENST00000515748 BARGINQ6ZT62 677 aa13.71□□□□□ -0.21
CSNK1A1-206ENST00000515748 PROM2Q8N271 834 aa13.71□□□□□ -0.21
CSNK1A1-206ENST00000515748 MTFR1LQ9H019 292 aa13.71□□□□□ -0.21
CSNK1A1-206ENST00000515748 PRDM11Q9NQV5 511 aa13.71□□□□□ -0.21
CSNK1A1-206ENST00000515748 MYOM1P52179 1685 aa13.71□□□□□ -0.21
CSNK1A1-206ENST00000515748 COL14A1Q05707 1796 aaKnown RBP13.69□□□□□ -0.22
CSNK1A1-206ENST00000515748 C11orf95C9JLR9 678 aaPredicted RBP13.69□□□□□ -0.22
CSNK1A1-206ENST00000515748 KIF1AQ12756 1690 aa13.69□□□□□ -0.22
CSNK1A1-206ENST00000515748 CASZ1Q86V15 1759 aa13.68□□□□□ -0.22
CSNK1A1-206ENST00000515748 PMFBP1Q8TBY8 1022 aa13.68□□□□□ -0.22
CSNK1A1-206ENST00000515748 KIF1BO60333 1816 aa13.68□□□□□ -0.22
CSNK1A1-206ENST00000515748 DLC1Q96QB1 1528 aa13.68□□□□□ -0.22
CSNK1A1-206ENST00000515748 PLEKHH1Q9ULM0 1364 aa13.68□□□□□ -0.22
CSNK1A1-206ENST00000515748 SLC34A2O95436 690 aa13.67□□□□□ -0.22
CSNK1A1-206ENST00000515748 EVA1CP58658 441 aa13.67□□□□□ -0.22
CSNK1A1-206ENST00000515748 CHRNA2Q15822 529 aa13.67□□□□□ -0.22
CSNK1A1-206ENST00000515748 COL13A1Q5TAT6 717 aaPredicted RBP13.67□□□□□ -0.22
CSNK1A1-206ENST00000515748 PELP1Q8IZL8 1130 aaKnown RBP13.67□□□□□ -0.22
CSNK1A1-206ENST00000515748 STK32BQ9NY57 414 aa13.67□□□□□ -0.22
CSNK1A1-206ENST00000515748 DHX57Q6P158 1386 aaKnown RBP13.67□□□□□ -0.22
CSNK1A1-206ENST00000515748 ABCA3Q99758 1704 aa13.67□□□□□ -0.22
CSNK1A1-206ENST00000515748 PRELPP51888 382 aa13.66□□□□□ -0.22
CSNK1A1-206ENST00000515748 SLC15A2Q16348 729 aa13.66□□□□□ -0.22
CSNK1A1-206ENST00000515748 MAP3K5Q99683 1374 aa13.66□□□□□ -0.22
CSNK1A1-206ENST00000515748 TCP11L2Q8N4U5 519 aa13.65□□□□□ -0.22
CSNK1A1-206ENST00000515748 NRXN1Q9ULB1 1477 aa13.65□□□□□ -0.22
CSNK1A1-206ENST00000515748 TECPR2O15040 1411 aa13.64□□□□□ -0.23
CSNK1A1-206ENST00000515748 ABCC11Q96J66 1382 aa13.64□□□□□ -0.23
CSNK1A1-206ENST00000515748 TMEM132EQ6IEE7 984 aa13.64□□□□□ -0.23
CSNK1A1-206ENST00000515748 PTF1AQ7RTS3 328 aa13.64□□□□□ -0.23
CSNK1A1-206ENST00000515748 GPBP1L1Q9HC44 474 aaPredicted RBP13.64□□□□□ -0.23
CSNK1A1-206ENST00000515748 SHANK3Q9BYB0 1731 aa13.64□□□□□ -0.23
CSNK1A1-206ENST00000515748 DNAJC5GQ8N7S2 189 aa13.63□□□□□ -0.23
CSNK1A1-206ENST00000515748 GOLGB1Q14789 3259 aaKnown RBP13.63□□□□□ -0.23
CSNK1A1-206ENST00000515748 FMN2Q9NZ56 1722 aa13.62□□□□□ -0.23
CSNK1A1-206ENST00000515748 KIAA0232Q92628 1395 aa13.61□□□□□ -0.23
CSNK1A1-206ENST00000515748 PPLO60437 1756 aa13.61□□□□□ -0.23
CSNK1A1-206ENST00000515748 ZC3H6P61129 1189 aaKnown RBP13.61□□□□□ -0.23
CSNK1A1-206ENST00000515748 TXNRD1Q16881 649 aa13.61□□□□□ -0.23
CSNK1A1-206ENST00000515748 LARP1Q6PKG0 1096 aaKnown RBP13.61□□□□□ -0.23
CSNK1A1-206ENST00000515748 SIRT1Q96EB6 747 aa13.61□□□□□ -0.23
CSNK1A1-206ENST00000515748 IFT172Q9UG01 1749 aa13.61□□□□□ -0.23
CSNK1A1-206ENST00000515748 GRIN3BO60391 1043 aa13.6□□□□□ -0.23
CSNK1A1-206ENST00000515748 PIK3C2GO75747 1445 aa13.6□□□□□ -0.23
CSNK1A1-206ENST00000515748 TNS4Q8IZW8 715 aa13.6□□□□□ -0.23
CSNK1A1-206ENST00000515748 STAC3Q96MF2 364 aa13.6□□□□□ -0.23
CSNK1A1-206ENST00000515748 PCGF6Q9BYE7 350 aa13.6□□□□□ -0.23
CSNK1A1-206ENST00000515748 THRAP3Q9Y2W1 955 aaKnown RBP13.6□□□□□ -0.23
CSNK1A1-206ENST00000515748 GPRASP1Q5JY77 1395 aa13.59□□□□□ -0.23
CSNK1A1-206ENST00000515748 ATP10DQ9P241 1426 aa13.59□□□□□ -0.23
CSNK1A1-206ENST00000515748 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
CSNK1A1-206ENST00000515748 APLP1P51693 650 aa13.59□□□□□ -0.23
CSNK1A1-206ENST00000515748 KLHL34Q8N239 644 aa13.59□□□□□ -0.23
CSNK1A1-206ENST00000515748 ADGRF5Q8IZF2 1346 aa13.59□□□□□ -0.23
CSNK1A1-206ENST00000515748 RGPD8O14715 1765 aaPredicted RBP13.58□□□□□ -0.23
CSNK1A1-206ENST00000515748 RGL3Q3MIN7 710 aa13.57□□□□□ -0.24
CSNK1A1-206ENST00000515748 SSH2Q76I76 1423 aa13.56□□□□□ -0.24
CSNK1A1-206ENST00000515748 YBX3P16989 372 aaKnown RBP eCLIP13.56□□□□□ -0.243e-8■□□□□ 9.5
CSNK1A1-206ENST00000515748 ZNF526Q8TF50 670 aaPredicted RBP13.56□□□□□ -0.24
CSNK1A1-206ENST00000515748 PCDH10Q9P2E7 1040 aa13.56□□□□□ -0.24
CSNK1A1-206ENST00000515748 OVOS2A0A0G2JMS6 1433 aa13.56□□□□□ -0.24
CSNK1A1-206ENST00000515748 OVOS2A0A0J9YW53 1432 aa13.56□□□□□ -0.24
CSNK1A1-206ENST00000515748 OVOS2Q6IE36 1432 aa13.56□□□□□ -0.24
CSNK1A1-206ENST00000515748 NLGN2Q8NFZ4 835 aa13.55□□□□□ -0.24
CSNK1A1-206ENST00000515748 SAFB2Q14151 953 aaKnown RBP eCLIP13.54□□□□□ -0.24
CSNK1A1-206ENST00000515748 CLSPNQ9HAW4 1339 aa13.54□□□□□ -0.24
CSNK1A1-206ENST00000515748 RGPD3A6NKT7 1758 aaPredicted RBP13.53□□□□□ -0.24
CSNK1A1-206ENST00000515748 RGPD4Q7Z3J3 1758 aa13.53□□□□□ -0.24
CSNK1A1-206ENST00000515748 POLD1P28340 1107 aa13.52□□□□□ -0.25
CSNK1A1-206ENST00000515748 DDB1Q16531 1140 aa13.52□□□□□ -0.25
CSNK1A1-206ENST00000515748 NGDNQ8NEJ9 315 aaKnown RBP13.52□□□□□ -0.25
CSNK1A1-206ENST00000515748 TRPM3Q9HCF6 1732 aaPredicted RBP13.51□□□□□ -0.25
CSNK1A1-206ENST00000515748 ALS2Q96Q42 1657 aa13.51□□□□□ -0.25
CSNK1A1-206ENST00000515748 YTHDC2Q9H6S0 1430 aaKnown RBP13.51□□□□□ -0.25
CSNK1A1-206ENST00000515748 NUTM2GQ5VZR2 741 aa13.51□□□□□ -0.25
CSNK1A1-206ENST00000515748 MARCH10Q8NA82 808 aaPredicted RBP13.51□□□□□ -0.25
CSNK1A1-206ENST00000515748 PRAM1Q96QH2 718 aa13.51□□□□□ -0.25
CSNK1A1-206ENST00000515748 C14orf93Q9H972 538 aaKnown RBP13.51□□□□□ -0.25
CSNK1A1-206ENST00000515748 ANKARQ7Z5J8 1434 aa13.5□□□□□ -0.25
CSNK1A1-206ENST00000515748 KIF3CO14782 793 aa13.5□□□□□ -0.25
CSNK1A1-206ENST00000515748 DCAF11Q8TEB1 546 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms