RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 MTMR14Q8NCE2 650 aa11.92□□□□□ -0.5
SFXN1-211ENST00000515736 KIF14Q15058 1648 aa11.92□□□□□ -0.5
SFXN1-211ENST00000515736 PLCH2O75038 1416 aa11.92□□□□□ -0.5
SFXN1-211ENST00000515736 PTPN23Q9H3S7 1636 aa11.91□□□□□ -0.5
SFXN1-211ENST00000515736 SPTLC1O15269 473 aa11.91□□□□□ -0.5
SFXN1-211ENST00000515736 CD46P15529 392 aa11.91□□□□□ -0.5
SFXN1-211ENST00000515736 MIA2Q96PC5 1412 aa11.91□□□□□ -0.5
SFXN1-211ENST00000515736 TCOF1Q13428 1488 aaKnown RBP11.9□□□□□ -0.5
SFXN1-211ENST00000515736 HSPA2P54652 639 aa11.9□□□□□ -0.5
SFXN1-211ENST00000515736 CDK11AQ9UQ88 783 aaPredicted RBP11.9□□□□□ -0.5
SFXN1-211ENST00000515736 GCC2Q8IWJ2 1684 aa11.9□□□□□ -0.5
SFXN1-211ENST00000515736 RCCD1A6NED2 376 aa11.89□□□□□ -0.51
SFXN1-211ENST00000515736 SOCS7O14512 581 aa11.89□□□□□ -0.51
SFXN1-211ENST00000515736 EFCAB2Q5VUJ9 269 aa11.89□□□□□ -0.51
SFXN1-211ENST00000515736 GDPD2Q9HCC8 539 aa11.89□□□□□ -0.51
SFXN1-211ENST00000515736 FAM198AQ9UFP1 575 aa11.89□□□□□ -0.51
SFXN1-211ENST00000515736 MYT1LQ9UL68 1186 aa11.89□□□□□ -0.51
SFXN1-211ENST00000515736 ITSN2Q9NZM3 1697 aa11.89□□□□□ -0.51
SFXN1-211ENST00000515736 ARHGAP5Q13017 1502 aa11.89□□□□□ -0.51
SFXN1-211ENST00000515736 RSBN1LQ6PCB5 846 aaPredicted RBP11.88□□□□□ -0.51
SFXN1-211ENST00000515736 EYA1Q99502 592 aa11.88□□□□□ -0.51
SFXN1-211ENST00000515736 RAB3GAP2Q9H2M9 1393 aa11.88□□□□□ -0.51
SFXN1-211ENST00000515736 ATP10AO60312 1499 aa11.88□□□□□ -0.51
SFXN1-211ENST00000515736 C9orf84Q5VXU9 1444 aa11.87□□□□□ -0.51
SFXN1-211ENST00000515736 KCTD17Q8N5Z5 321 aa11.87□□□□□ -0.51
SFXN1-211ENST00000515736 PREX1Q8TCU6 1659 aa11.87□□□□□ -0.51
SFXN1-211ENST00000515736 NUDT7P0C024 238 aa11.86□□□□□ -0.51
SFXN1-211ENST00000515736 HFM1A2PYH4 1435 aa11.86□□□□□ -0.51
SFXN1-211ENST00000515736 TROQ12816 1431 aaPredicted RBP11.86□□□□□ -0.51
SFXN1-211ENST00000515736 ZNF518AQ6AHZ1 1483 aa11.85□□□□□ -0.51
SFXN1-211ENST00000515736 NUTM1Q86Y26 1132 aa11.85□□□□□ -0.51
SFXN1-211ENST00000515736 SULF1Q8IWU6 871 aa11.85□□□□□ -0.51
SFXN1-211ENST00000515736 WWC1Q8IX03 1113 aa11.85□□□□□ -0.51
SFXN1-211ENST00000515736 CDC42BPBQ9Y5S2 1711 aa11.85□□□□□ -0.51
SFXN1-211ENST00000515736 ARHGEF12Q9NZN5 1544 aa11.85□□□□□ -0.51
SFXN1-211ENST00000515736 MOXD2PA6NHM9 499 aa11.84□□□□□ -0.51
SFXN1-211ENST00000515736 GJA5P36382 358 aa11.84□□□□□ -0.51
SFXN1-211ENST00000515736 RETREG2Q8NC44 543 aa11.84□□□□□ -0.51
SFXN1-211ENST00000515736 LILRB3O75022 631 aa11.83□□□□□ -0.52
SFXN1-211ENST00000515736 POTEIP0CG38 1075 aa11.83□□□□□ -0.52
SFXN1-211ENST00000515736 QPCTQ16769 361 aa11.83□□□□□ -0.52
SFXN1-211ENST00000515736 KHSRPQ92945 711 aaKnown RBP eCLIP11.83□□□□□ -0.522e-16■■■□□ 19.1
SFXN1-211ENST00000515736 PREX2Q70Z35 1606 aa11.82□□□□□ -0.52
SFXN1-211ENST00000515736 COL9A1P20849 921 aa11.82□□□□□ -0.52
SFXN1-211ENST00000515736 FAM50AQ14320 339 aaKnown RBP11.82□□□□□ -0.52
SFXN1-211ENST00000515736 CSPP1Q1MSJ5 1256 aa11.82□□□□□ -0.52
SFXN1-211ENST00000515736 ARSIQ5FYB1 569 aa11.82□□□□□ -0.52
SFXN1-211ENST00000515736 PRM3Q9NNZ6 103 aa11.82□□□□□ -0.52
SFXN1-211ENST00000515736 KDM5CP41229 1560 aa11.82□□□□□ -0.52
SFXN1-211ENST00000515736 DIP2CQ9Y2E4 1556 aa11.81□□□□□ -0.52
SFXN1-211ENST00000515736 DDX11L8A8MPP1 907 aa11.81□□□□□ -0.52
SFXN1-211ENST00000515736 ABL2P42684 1182 aa11.81□□□□□ -0.52
SFXN1-211ENST00000515736 CEBPAP49715 358 aaPredicted RBP11.81□□□□□ -0.52
SFXN1-211ENST00000515736 AFAP1Q8N556 730 aa11.81□□□□□ -0.52
SFXN1-211ENST00000515736 TSKSQ9UJT2 592 aa11.81□□□□□ -0.52
SFXN1-211ENST00000515736 ABCA6Q8N139 1617 aa11.81□□□□□ -0.52
SFXN1-211ENST00000515736 DNMT1P26358 1616 aaKnown RBP11.8□□□□□ -0.52
SFXN1-211ENST00000515736 PPP1R15AO75807 674 aaPredicted RBP11.8□□□□□ -0.52
SFXN1-211ENST00000515736 NDUFV2P19404 249 aa11.8□□□□□ -0.52
SFXN1-211ENST00000515736 DNAJB2P25686 324 aa11.8□□□□□ -0.52
SFXN1-211ENST00000515736 CALR3Q96L12 384 aaKnown RBP11.8□□□□□ -0.52
SFXN1-211ENST00000515736 TBC1D2BQ9UPU7 963 aa11.8□□□□□ -0.52
SFXN1-211ENST00000515736 CDC42BPAQ5VT25 1732 aa11.8□□□□□ -0.52
SFXN1-211ENST00000515736 POM121CA8CG34 1229 aa11.79□□□□□ -0.52
SFXN1-211ENST00000515736 AP1G2O75843 785 aa11.79□□□□□ -0.52
SFXN1-211ENST00000515736 DOK7Q18PE1 504 aa11.79□□□□□ -0.52
SFXN1-211ENST00000515736 RTL5Q5HYW3 569 aaPredicted RBP11.79□□□□□ -0.52
SFXN1-211ENST00000515736 NUDT18Q6ZVK8 323 aa11.79□□□□□ -0.52
SFXN1-211ENST00000515736 AEBP1Q8IUX7 1158 aa11.79□□□□□ -0.52
SFXN1-211ENST00000515736 ESF1Q9H501 851 aaKnown RBP11.79□□□□□ -0.52
SFXN1-211ENST00000515736 PCDHB15Q9Y5E8 787 aa11.79□□□□□ -0.52
SFXN1-211ENST00000515736 SETD1BQ9UPS6 1966 aaKnown RBP11.79□□□□□ -0.52
SFXN1-211ENST00000515736 C3P01024 1663 aa11.78□□□□□ -0.52
SFXN1-211ENST00000515736 ADGBQ8N7X0 1667 aa11.78□□□□□ -0.52
SFXN1-211ENST00000515736 ABCC1P33527 1531 aa11.78□□□□□ -0.52
SFXN1-211ENST00000515736 C3orf80F5H4A9 247 aa11.78□□□□□ -0.52
SFXN1-211ENST00000515736 ZNF710Q8N1W2 664 aa11.78□□□□□ -0.52
SFXN1-211ENST00000515736 GLMNQ92990 594 aa11.78□□□□□ -0.52
SFXN1-211ENST00000515736 TMEM134Q9H6X4 195 aa11.78□□□□□ -0.52
SFXN1-211ENST00000515736 ZSWIM6Q9HCJ5 1215 aa11.78□□□□□ -0.52
SFXN1-211ENST00000515736 REREQ9P2R6 1566 aa11.77□□□□□ -0.53
SFXN1-211ENST00000515736 HOXB3P14651 431 aaPredicted RBP11.77□□□□□ -0.53
SFXN1-211ENST00000515736 GPR153Q6NV75 609 aa11.77□□□□□ -0.53
SFXN1-211ENST00000515736 BCL2L12Q9HB09 334 aa11.77□□□□□ -0.53
SFXN1-211ENST00000515736 CROCC2H7BZ55 1655 aa11.77□□□□□ -0.53
SFXN1-211ENST00000515736 ROCK1Q13464 1354 aa11.77□□□□□ -0.53
SFXN1-211ENST00000515736 STRCQ7RTU9 1775 aa11.77□□□□□ -0.53
SFXN1-211ENST00000515736 UHRF1BP1Q6BDS2 1440 aa11.77□□□□□ -0.53
SFXN1-211ENST00000515736 USP17L8P0C7I0 530 aa11.76□□□□□ -0.53
SFXN1-211ENST00000515736 DIEXFQ68CQ4 756 aaKnown RBP11.76□□□□□ -0.53
SFXN1-211ENST00000515736 KIDINS220Q9ULH0 1771 aa11.76□□□□□ -0.53
SFXN1-211ENST00000515736 NAIPQ13075 1403 aa11.76□□□□□ -0.53
SFXN1-211ENST00000515736 MLH3Q9UHC1 1453 aa11.76□□□□□ -0.53
SFXN1-211ENST00000515736 NBPF26B4DH59 902 aa11.75□□□□□ -0.53
SFXN1-211ENST00000515736 PPP1R3GB7ZBB8 358 aa11.75□□□□□ -0.53
SFXN1-211ENST00000515736 IRF5Q13568 498 aa11.75□□□□□ -0.53
SFXN1-211ENST00000515736 PRPF38BQ5VTL8 546 aaKnown RBP11.75□□□□□ -0.53
SFXN1-211ENST00000515736 TATDN2Q93075 761 aa11.75□□□□□ -0.53
SFXN1-211ENST00000515736 LHX6Q9UPM6 363 aa11.75□□□□□ -0.53
SFXN1-211ENST00000515736 TRAPPC8Q9Y2L5 1435 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms