RNA–Protein interactions for RNA: ENST00000515663.5

CAST-244, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-244ENST00000515663 USP6P35125 1406 aa11.9□□□□□ -0.51
CAST-244ENST00000515663 NPM3O75607 178 aaKnown RBP11.89□□□□□ -0.51
CAST-244ENST00000515663 PROSER2Q86WR7 435 aaPredicted RBP11.89□□□□□ -0.51
CAST-244ENST00000515663 C19orf44Q9H6X5 657 aa11.89□□□□□ -0.51
CAST-244ENST00000515663 ITSN1Q15811 1721 aa11.88□□□□□ -0.51
CAST-244ENST00000515663 ANKRD26Q9UPS8 1709 aa11.88□□□□□ -0.51
CAST-244ENST00000515663 NRKQ7Z2Y5 1582 aa11.88□□□□□ -0.51
CAST-244ENST00000515663 DCCP43146 1447 aa11.88□□□□□ -0.51
CAST-244ENST00000515663 TTC21BQ7Z4L5 1316 aa11.88□□□□□ -0.51
CAST-244ENST00000515663 KCNA4P22459 653 aa11.88□□□□□ -0.51
CAST-244ENST00000515663 GGNBP2Q9H3C7 697 aa11.88□□□□□ -0.51
CAST-244ENST00000515663 STRCP1A6NGW2 1772 aa11.87□□□□□ -0.51
CAST-244ENST00000515663 TTC21AQ8NDW8 1320 aa11.87□□□□□ -0.51
CAST-244ENST00000515663 TMEM94Q12767 1356 aa11.86□□□□□ -0.51
CAST-244ENST00000515663 AATKQ6ZMQ8 1374 aa11.86□□□□□ -0.51
CAST-244ENST00000515663 NUTM2FA1L443 756 aa11.86□□□□□ -0.51
CAST-244ENST00000515663 HNRNPUQ00839 825 aaKnown RBP eCLIP11.86□□□□□ -0.51
CAST-244ENST00000515663 USP31Q70CQ4 1352 aa11.85□□□□□ -0.51
CAST-244ENST00000515663 PNPLA6Q8IY17 1366 aa11.85□□□□□ -0.51
CAST-244ENST00000515663 MTHFSP49914 203 aa11.85□□□□□ -0.51
CAST-244ENST00000515663 RBM33Q96EV2 1170 aaKnown RBP11.85□□□□□ -0.51
CAST-244ENST00000515663 BLMP54132 1417 aaPredicted RBP11.85□□□□□ -0.51
CAST-244ENST00000515663 KIF20BQ96Q89 1820 aa11.85□□□□□ -0.51
CAST-244ENST00000515663 ZBED9Q6R2W3 1325 aa11.84□□□□□ -0.51
CAST-244ENST00000515663 NME9Q86XW9 330 aa11.84□□□□□ -0.51
CAST-244ENST00000515663 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.84□□□□□ -0.51
CAST-244ENST00000515663 PMFBP1Q8TBY8 1022 aa11.84□□□□□ -0.51
CAST-244ENST00000515663 PHF8Q9UPP1 1060 aa11.84□□□□□ -0.51
CAST-244ENST00000515663 OVOS2A0A0J9YW53 1432 aa11.84□□□□□ -0.51
CAST-244ENST00000515663 OVOS2Q6IE36 1432 aa11.84□□□□□ -0.51
CAST-244ENST00000515663 NGDNQ8NEJ9 315 aaKnown RBP11.83□□□□□ -0.52
CAST-244ENST00000515663 ADAMTS8Q9UP79 889 aa11.83□□□□□ -0.52
CAST-244ENST00000515663 SMG6Q86US8 1419 aaKnown RBP11.83□□□□□ -0.52
CAST-244ENST00000515663 RGPD8O14715 1765 aaPredicted RBP11.83□□□□□ -0.52
CAST-244ENST00000515663 LRRC7Q96NW7 1537 aa11.82□□□□□ -0.52
CAST-244ENST00000515663 COL3A1P02461 1466 aaPredicted RBP11.82□□□□□ -0.52
CAST-244ENST00000515663 C1orf167Q5SNV9 1468 aa11.82□□□□□ -0.52
CAST-244ENST00000515663 MST1RQ04912 1400 aa11.82□□□□□ -0.52
CAST-244ENST00000515663 COG3Q96JB2 828 aa11.82□□□□□ -0.52
CAST-244ENST00000515663 CFAP53Q96M91 514 aa11.82□□□□□ -0.52
CAST-244ENST00000515663 POLKQ9UBT6 870 aa11.82□□□□□ -0.52
CAST-244ENST00000515663 TNNT2P45379 298 aaPredicted RBP11.81□□□□□ -0.52
CAST-244ENST00000515663 C14orf37Q86TY3 774 aa11.81□□□□□ -0.52
CAST-244ENST00000515663 ZRANB1Q9UGI0 708 aa11.81□□□□□ -0.52
CAST-244ENST00000515663 WDR43Q15061 677 aaKnown RBP eCLIP11.8□□□□□ -0.52
CAST-244ENST00000515663 CADPS2Q86UW7 1296 aa11.8□□□□□ -0.52
CAST-244ENST00000515663 SHPRHQ149N8 1683 aa11.8□□□□□ -0.52
CAST-244ENST00000515663 USP54Q70EL1 1684 aa11.8□□□□□ -0.52
CAST-244ENST00000515663 ZNF335Q9H4Z2 1342 aaPredicted RBP11.79□□□□□ -0.52
CAST-244ENST00000515663 ESCO1Q5FWF5 840 aa11.79□□□□□ -0.52
CAST-244ENST00000515663 ORAI2Q96SN7 254 aa11.79□□□□□ -0.52
CAST-244ENST00000515663 MSH6P52701 1360 aa11.78□□□□□ -0.52
CAST-244ENST00000515663 ATF3P18847 181 aa11.78□□□□□ -0.52
CAST-244ENST00000515663 NGEFQ8N5V2 710 aa11.77□□□□□ -0.52
CAST-244ENST00000515663 KIF1AQ12756 1690 aa11.77□□□□□ -0.53
CAST-244ENST00000515663 XIRP1Q702N8 1843 aaKnown RBP11.77□□□□□ -0.53
CAST-244ENST00000515663 CDK12Q9NYV4 1490 aaPredicted RBP11.77□□□□□ -0.53
CAST-244ENST00000515663 PIK3C2AO00443 1686 aa11.76□□□□□ -0.53
CAST-244ENST00000515663 NUDCQ9Y266 331 aa11.76□□□□□ -0.53
CAST-244ENST00000515663 KIF24Q5T7B8 1368 aa11.75□□□□□ -0.53
CAST-244ENST00000515663 DIAPH1O60610 1272 aaKnown RBP11.75□□□□□ -0.53
CAST-244ENST00000515663 FBLN1P23142 703 aa11.75□□□□□ -0.53
CAST-244ENST00000515663 PSME1Q06323 249 aa11.75□□□□□ -0.53
CAST-244ENST00000515663 PDE3BQ13370 1112 aa11.75□□□□□ -0.53
CAST-244ENST00000515663 EMILIN1Q9Y6C2 1016 aa11.75□□□□□ -0.53
CAST-244ENST00000515663 ZNF521Q96K83 1311 aa11.74□□□□□ -0.53
CAST-244ENST00000515663 FOXO3O43524 673 aa11.74□□□□□ -0.53
CAST-244ENST00000515663 NLRP6P59044 892 aa11.74□□□□□ -0.53
CAST-244ENST00000515663 MARF1Q9Y4F3 1742 aaKnown RBP11.74□□□□□ -0.53
CAST-244ENST00000515663 IL13P35225 146 aa11.73□□□□□ -0.53
CAST-244ENST00000515663 KRT28Q7Z3Y7 464 aa11.73□□□□□ -0.53
CAST-244ENST00000515663 ABTB2Q8N961 1025 aa11.73□□□□□ -0.53
CAST-244ENST00000515663 RUNDC1Q96C34 613 aa11.73□□□□□ -0.53
CAST-244ENST00000515663 SBNO1A3KN83 1393 aa11.73□□□□□ -0.53
CAST-244ENST00000515663 TRPM3Q9HCF6 1732 aaPredicted RBP11.72□□□□□ -0.53
CAST-244ENST00000515663 RRS1Q15050 365 aaKnown RBP11.72□□□□□ -0.53
CAST-244ENST00000515663 PLEKHF1Q96S99 279 aa11.72□□□□□ -0.53
CAST-244ENST00000515663 LTBP4Q8N2S1 1624 aa11.72□□□□□ -0.53
CAST-244ENST00000515663 MAP2P11137 1827 aaKnown RBP11.72□□□□□ -0.53
CAST-244ENST00000515663 FCHSD2O94868 740 aa11.71□□□□□ -0.53
CAST-244ENST00000515663 USP19O94966 1318 aa11.71□□□□□ -0.53
CAST-244ENST00000515663 MAP3K19Q56UN5 1328 aa11.71□□□□□ -0.53
CAST-244ENST00000515663 NPHP3Q7Z494 1330 aa11.71□□□□□ -0.53
CAST-244ENST00000515663 IQSEC2Q5JU85 1478 aa11.71□□□□□ -0.54
CAST-244ENST00000515663 APAF1O14727 1248 aa11.7□□□□□ -0.54
CAST-244ENST00000515663 U2AF1L5P0DN76 240 aaPredicted RBP11.7□□□□□ -0.54
CAST-244ENST00000515663 U2AF1Q01081 240 aaKnown RBP eCLIP11.7□□□□□ -0.54
CAST-244ENST00000515663 BRINP3Q76B58 766 aa11.7□□□□□ -0.54
CAST-244ENST00000515663 SLAIN2Q9P270 581 aa11.7□□□□□ -0.54
CAST-244ENST00000515663 U3KPZ7 1027 aaPredicted RBP11.7□□□□□ -0.54
CAST-244ENST00000515663 SLIT3O75094 1523 aa11.7□□□□□ -0.54
CAST-244ENST00000515663 PAK3O75914 559 aaPredicted RBP11.7□□□□□ -0.54
CAST-244ENST00000515663 CCDC27Q2M243 656 aa11.7□□□□□ -0.54
CAST-244ENST00000515663 KCNH5Q8NCM2 988 aa11.7□□□□□ -0.54
CAST-244ENST00000515663 PNNQ9H307 717 aaKnown RBP11.7□□□□□ -0.54
CAST-244ENST00000515663 FLT4P35916 1363 aa11.69□□□□□ -0.54
CAST-244ENST00000515663 PXDNQ92626 1479 aa11.69□□□□□ -0.54
CAST-244ENST00000515663 NFAT5O94916 1531 aa11.69□□□□□ -0.54
CAST-244ENST00000515663 PEAK1Q9H792 1746 aa11.69□□□□□ -0.54
CAST-244ENST00000515663 CCDC146Q8IYE0 955 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms