RNA–Protein interactions for RNA: ENST00000515627.2

LINC01843-201, Transcript of long intergenic non-protein coding RNA 1843, humanhuman

TSL 1 (best) BASIC

Gene LINC01843, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01843-201ENST00000515627 ITSN1Q15811 1721 aa14.82□□□□□ -0.04
LINC01843-201ENST00000515627 NGDNQ8NEJ9 315 aaKnown RBP14.81□□□□□ -0.04
LINC01843-201ENST00000515627 CDK19Q9BWU1 502 aa14.81□□□□□ -0.04
LINC01843-201ENST00000515627 ONECUT3O60422 494 aaPredicted RBP14.8□□□□□ -0.04
LINC01843-201ENST00000515627 SEPT12Q8IYM1 358 aa14.8□□□□□ -0.04
LINC01843-201ENST00000515627 COL14A1Q05707 1796 aaKnown RBP14.8□□□□□ -0.04
LINC01843-201ENST00000515627 POLR3AO14802 1390 aaPredicted RBP14.78□□□□□ -0.04
LINC01843-201ENST00000515627 BTG4Q9NY30 223 aa14.78□□□□□ -0.04
LINC01843-201ENST00000515627 PAK3O75914 559 aaPredicted RBP14.77□□□□□ -0.05
LINC01843-201ENST00000515627 CCDC125Q86Z20 511 aa14.77□□□□□ -0.05
LINC01843-201ENST00000515627 CCDC9Q9Y3X0 531 aaKnown RBP14.77□□□□□ -0.05
LINC01843-201ENST00000515627 PHRF1Q9P1Y6 1649 aaKnown RBP14.77□□□□□ -0.05
LINC01843-201ENST00000515627 ACEP12821 1306 aa14.76□□□□□ -0.05
LINC01843-201ENST00000515627 BLMP54132 1417 aaPredicted RBP14.75□□□□□ -0.05
LINC01843-201ENST00000515627 PLEKHG3A1L390 1219 aa14.75□□□□□ -0.05
LINC01843-201ENST00000515627 L3MBTL2Q969R5 705 aa14.75□□□□□ -0.05
LINC01843-201ENST00000515627 CCDC61Q9Y6R9 512 aa14.75□□□□□ -0.05
LINC01843-201ENST00000515627 NBPF8Q3BBV2 869 aa14.74□□□□□ -0.05
LINC01843-201ENST00000515627 SIN3AQ96ST3 1273 aa14.74□□□□□ -0.05
LINC01843-201ENST00000515627 QRICH2Q9H0J4 1663 aa14.74□□□□□ -0.05
LINC01843-201ENST00000515627 KIAA0232Q92628 1395 aa14.73□□□□□ -0.05
LINC01843-201ENST00000515627 SPATA31A5Q5VU36 1347 aa14.73□□□□□ -0.05
LINC01843-201ENST00000515627 SPATA31A7Q8IWB4 1347 aa14.73□□□□□ -0.05
LINC01843-201ENST00000515627 CENPJQ9HC77 1338 aaPredicted RBP14.73□□□□□ -0.05
LINC01843-201ENST00000515627 FAM98CQ17RN3 349 aaKnown RBP14.73□□□□□ -0.05
LINC01843-201ENST00000515627 NUTM2GQ5VZR2 741 aa14.73□□□□□ -0.05
LINC01843-201ENST00000515627 KRT27Q7Z3Y8 459 aa14.73□□□□□ -0.05
LINC01843-201ENST00000515627 PRDM11Q9NQV5 511 aa14.73□□□□□ -0.05
LINC01843-201ENST00000515627 NRKQ7Z2Y5 1582 aa14.73□□□□□ -0.05
LINC01843-201ENST00000515627 THSD7AQ9UPZ6 1657 aa14.72□□□□□ -0.05
LINC01843-201ENST00000515627 DEFB132Q7Z7B7 95 aa14.72□□□□□ -0.05
LINC01843-201ENST00000515627 TRPM1Q7Z4N2 1603 aa14.72□□□□□ -0.05
LINC01843-201ENST00000515627 CHRNA2Q15822 529 aa14.71□□□□□ -0.05
LINC01843-201ENST00000515627 CABP2Q9NPB3 220 aa14.71□□□□□ -0.05
LINC01843-201ENST00000515627 PPIP5K1Q6PFW1 1433 aa14.71□□□□□ -0.05
LINC01843-201ENST00000515627 USP19O94966 1318 aa14.69□□□□□ -0.06
LINC01843-201ENST00000515627 A0A0G2JS52 829 aa14.69□□□□□ -0.06
LINC01843-201ENST00000515627 ZC3H6P61129 1189 aaKnown RBP14.69□□□□□ -0.06
LINC01843-201ENST00000515627 SRPK2P78362 688 aaKnown RBP14.69□□□□□ -0.06
LINC01843-201ENST00000515627 MYT1Q01538 1121 aa14.69□□□□□ -0.06
LINC01843-201ENST00000515627 ZRANB1Q9UGI0 708 aa14.69□□□□□ -0.06
LINC01843-201ENST00000515627 SPATA31A1Q5TZJ5 1347 aa14.68□□□□□ -0.06
LINC01843-201ENST00000515627 LMO7Q8WWI1 1683 aa14.68□□□□□ -0.06
LINC01843-201ENST00000515627 ABTB2Q8N961 1025 aa14.68□□□□□ -0.06
LINC01843-201ENST00000515627 CAMTA1Q9Y6Y1 1673 aa14.68□□□□□ -0.06
LINC01843-201ENST00000515627 NEUROD1Q13562 356 aa14.67□□□□□ -0.06
LINC01843-201ENST00000515627 FAM182BQ5T319 152 aa14.67□□□□□ -0.06
LINC01843-201ENST00000515627 SRCAPQ6ZRS2 3230 aa14.66□□□□□ -0.06
LINC01843-201ENST00000515627 CPDO75976 1380 aa14.66□□□□□ -0.06
LINC01843-201ENST00000515627 STRN4Q9NRL3 753 aa14.66□□□□□ -0.06
LINC01843-201ENST00000515627 CABP1Q9NZU7 370 aa14.66□□□□□ -0.06
LINC01843-201ENST00000515627 USP6P35125 1406 aa14.66□□□□□ -0.06
LINC01843-201ENST00000515627 SSH2Q76I76 1423 aa14.66□□□□□ -0.06
LINC01843-201ENST00000515627 ROCK2O75116 1388 aaKnown RBP14.64□□□□□ -0.07
LINC01843-201ENST00000515627 SF3B2Q13435 895 aaKnown RBP14.64□□□□□ -0.07
LINC01843-201ENST00000515627 BRD4O60885 1362 aaPredicted RBP14.63□□□□□ -0.07
LINC01843-201ENST00000515627 PIK3C2AO00443 1686 aa14.63□□□□□ -0.07
LINC01843-201ENST00000515627 GCP02774 474 aa14.63□□□□□ -0.07
LINC01843-201ENST00000515627 RGPD1P0DJD0 1748 aa14.63□□□□□ -0.07
LINC01843-201ENST00000515627 TNS1Q9HBL0 1735 aaKnown RBP14.63□□□□□ -0.07
LINC01843-201ENST00000515627 SLIT3O75094 1523 aa14.62□□□□□ -0.07
LINC01843-201ENST00000515627 LARP1Q6PKG0 1096 aaKnown RBP14.62□□□□□ -0.07
LINC01843-201ENST00000515627 NLRP13Q86W25 1043 aa14.62□□□□□ -0.07
LINC01843-201ENST00000515627 EVC2Q86UK5 1308 aa14.62□□□□□ -0.07
LINC01843-201ENST00000515627 BARGINQ6ZT62 677 aa14.61□□□□□ -0.07
LINC01843-201ENST00000515627 USP35Q9P2H5 1018 aa14.61□□□□□ -0.07
LINC01843-201ENST00000515627 COL5A2P05997 1499 aaPredicted RBP14.61□□□□□ -0.07
LINC01843-201ENST00000515627 DISP2A7MBM2 1401 aa14.6□□□□□ -0.07
LINC01843-201ENST00000515627 BAG6P46379 1132 aa14.6□□□□□ -0.07
LINC01843-201ENST00000515627 EVA1CP58658 441 aa14.6□□□□□ -0.07
LINC01843-201ENST00000515627 AKAP12Q02952 1782 aa14.6□□□□□ -0.07
LINC01843-201ENST00000515627 NLRP6P59044 892 aa14.59□□□□□ -0.07
LINC01843-201ENST00000515627 EN1Q05925 392 aaPredicted RBP14.59□□□□□ -0.07
LINC01843-201ENST00000515627 COL18A1P39060 1754 aa14.59□□□□□ -0.07
LINC01843-201ENST00000515627 TCP11L2Q8N4U5 519 aa14.58□□□□□ -0.08
LINC01843-201ENST00000515627 CPSF1Q10570 1443 aaKnown RBP14.58□□□□□ -0.08
LINC01843-201ENST00000515627 TTC21BQ7Z4L5 1316 aa14.57□□□□□ -0.08
LINC01843-201ENST00000515627 AATKQ6ZMQ8 1374 aa14.57□□□□□ -0.08
LINC01843-201ENST00000515627 PARP4Q9UKK3 1724 aaKnown RBP14.56□□□□□ -0.08
LINC01843-201ENST00000515627 PSDA5PKW4 1024 aaPredicted RBP14.56□□□□□ -0.08
LINC01843-201ENST00000515627 TRIM37O94972 964 aa14.56□□□□□ -0.08
LINC01843-201ENST00000515627 FAM196AQ6ZSG2 479 aa14.56□□□□□ -0.08
LINC01843-201ENST00000515627 SBNO2Q9Y2G9 1366 aa14.56□□□□□ -0.08
LINC01843-201ENST00000515627 CRB1P82279 1406 aa14.56□□□□□ -0.08
LINC01843-201ENST00000515627 AXIN2Q9Y2T1 843 aa14.55□□□□□ -0.08
LINC01843-201ENST00000515627 LRP5O75197 1615 aa14.55□□□□□ -0.08
LINC01843-201ENST00000515627 MON2Q7Z3U7 1717 aa14.55□□□□□ -0.08
LINC01843-201ENST00000515627 ZBTB7CA1YPR0 619 aa14.54□□□□□ -0.08
LINC01843-201ENST00000515627 EZH2Q15910 746 aaKnown RBP14.54□□□□□ -0.08
LINC01843-201ENST00000515627 CAMKK2Q96RR4 588 aa14.54□□□□□ -0.08
LINC01843-201ENST00000515627 ZNF692Q9BU19 519 aaPredicted RBP14.54□□□□□ -0.08
LINC01843-201ENST00000515627 THRAP3Q9Y2W1 955 aaKnown RBP14.54□□□□□ -0.08
LINC01843-201ENST00000515627 CD163L1Q9NR16 1453 aa14.54□□□□□ -0.08
LINC01843-201ENST00000515627 NFAT5O94916 1531 aa14.53□□□□□ -0.08
LINC01843-201ENST00000515627 PDE3BQ13370 1112 aa14.53□□□□□ -0.08
LINC01843-201ENST00000515627 CARD11Q9BXL7 1154 aa14.53□□□□□ -0.08
LINC01843-201ENST00000515627 PEAK1Q9H792 1746 aa14.52□□□□□ -0.08
LINC01843-201ENST00000515627 LRRC37A3O60309 1634 aa14.52□□□□□ -0.08
LINC01843-201ENST00000515627 KTN1Q86UP2 1357 aaKnown RBP14.52□□□□□ -0.08
LINC01843-201ENST00000515627 TTC21AQ8NDW8 1320 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms