RNA–Protein interactions for RNA: ENST00000515478.1

CENPE-207, Transcript of centromere protein E, humanhuman

TSL 5

Gene CENPE, Length 291 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-207ENST00000515478 TRIM46Q7Z4K8 759 aa12.98□□□□□ -0.33
CENPE-207ENST00000515478 PARP9Q8IXQ6 854 aa12.98□□□□□ -0.33
CENPE-207ENST00000515478 ZBTB3Q9H5J0 574 aa12.98□□□□□ -0.33
CENPE-207ENST00000515478 NNTQ13423 1086 aa12.97□□□□□ -0.33
CENPE-207ENST00000515478 CSPP1Q1MSJ5 1256 aa12.96□□□□□ -0.33
CENPE-207ENST00000515478 LYPD8Q6UX82 237 aa12.96□□□□□ -0.33
CENPE-207ENST00000515478 PCDHB15Q9Y5E8 787 aa12.96□□□□□ -0.33
CENPE-207ENST00000515478 TRIM66O15016 1216 aa12.95□□□□□ -0.34
CENPE-207ENST00000515478 FAM174AQ8TBP5 190 aa12.95□□□□□ -0.34
CENPE-207ENST00000515478 TSC1Q92574 1164 aa12.95□□□□□ -0.34
CENPE-207ENST00000515478 AK7Q96M32 723 aa12.95□□□□□ -0.34
CENPE-207ENST00000515478 NXF1Q9UBU9 619 aaKnown RBP12.95□□□□□ -0.34
CENPE-207ENST00000515478 RIC3Q7Z5B4 369 aa12.94□□□□□ -0.34
CENPE-207ENST00000515478 CFAP99D6REC4 459 aa12.93□□□□□ -0.34
CENPE-207ENST00000515478 SPTLC1O15269 473 aa12.93□□□□□ -0.34
CENPE-207ENST00000515478 HRCP23327 699 aa12.93□□□□□ -0.34
CENPE-207ENST00000515478 AGERQ15109 404 aa12.93□□□□□ -0.34
CENPE-207ENST00000515478 SCARF1Q14162 830 aa12.92□□□□□ -0.34
CENPE-207ENST00000515478 ARID5BQ14865 1188 aa12.92□□□□□ -0.34
CENPE-207ENST00000515478 ADH1CP00326 375 aa12.91□□□□□ -0.34
CENPE-207ENST00000515478 WDR4P57081 412 aaKnown RBP12.91□□□□□ -0.34
CENPE-207ENST00000515478 MPNDQ8N594 471 aa12.91□□□□□ -0.34
CENPE-207ENST00000515478 ZFP42Q96MM3 310 aa12.91□□□□□ -0.34
CENPE-207ENST00000515478 MAP10Q9P2G4 905 aa12.91□□□□□ -0.34
CENPE-207ENST00000515478 NUTM2BA6NNL0 878 aaPredicted RBP12.9□□□□□ -0.34
CENPE-207ENST00000515478 NUTM2EB1AL46 878 aaPredicted RBP12.9□□□□□ -0.34
CENPE-207ENST00000515478 NUTM2DQ5VT03 806 aaPredicted RBP12.9□□□□□ -0.34
CENPE-207ENST00000515478 PRPF38BQ5VTL8 546 aaKnown RBP12.9□□□□□ -0.34
CENPE-207ENST00000515478 NUTM2AQ8IVF1 878 aaPredicted RBP12.9□□□□□ -0.34
CENPE-207ENST00000515478 CABLES1Q8TDN4 633 aa12.9□□□□□ -0.34
CENPE-207ENST00000515478 LCE2CQ5TA81 110 aa12.89□□□□□ -0.35
CENPE-207ENST00000515478 IRF7Q92985 503 aa12.89□□□□□ -0.35
CENPE-207ENST00000515478 MRPL14Q6P1L8 145 aaKnown RBP12.88□□□□□ -0.35
CENPE-207ENST00000515478 FOXJ1Q92949 421 aa12.88□□□□□ -0.35
CENPE-207ENST00000515478 VEGFBP49765 207 aa12.87□□□□□ -0.35
CENPE-207ENST00000515478 NPAS3Q8IXF0 933 aa12.87□□□□□ -0.35
CENPE-207ENST00000515478 TIMP2P16035 220 aa12.86□□□□□ -0.35
CENPE-207ENST00000515478 PURBQ96QR8 312 aaKnown RBP12.86□□□□□ -0.35
CENPE-207ENST00000515478 F12P00748 615 aaPredicted RBP12.85□□□□□ -0.35
CENPE-207ENST00000515478 FAM181BA6NEQ2 426 aa12.84□□□□□ -0.35
CENPE-207ENST00000515478 BPHLQ86WA6 291 aaPredicted RBP12.84□□□□□ -0.35
CENPE-207ENST00000515478 GMPRP36959 345 aa12.82□□□□□ -0.36
CENPE-207ENST00000515478 PDE4DQ08499 809 aa12.82□□□□□ -0.36
CENPE-207ENST00000515478 ARMC2Q8NEN0 867 aa12.82□□□□□ -0.36
CENPE-207ENST00000515478 CDK15Q96Q40 435 aa12.82□□□□□ -0.36
CENPE-207ENST00000515478 PER1O15534 1290 aaPredicted RBP12.81□□□□□ -0.36
CENPE-207ENST00000515478 ZIC2O95409 532 aaPredicted RBP12.81□□□□□ -0.36
CENPE-207ENST00000515478 MYSM1Q5VVJ2 828 aa12.81□□□□□ -0.36
CENPE-207ENST00000515478 HELBQ8NG08 1087 aaPredicted RBP12.81□□□□□ -0.36
CENPE-207ENST00000515478 LIMD1Q9UGP4 676 aa12.81□□□□□ -0.36
CENPE-207ENST00000515478 H3BM21 787 aa12.8□□□□□ -0.36
CENPE-207ENST00000515478 NR5A1Q13285 461 aa12.8□□□□□ -0.36
CENPE-207ENST00000515478 QPCTQ16769 361 aa12.79□□□□□ -0.36
CENPE-207ENST00000515478 UPP2O95045 317 aa12.78□□□□□ -0.36
CENPE-207ENST00000515478 C6orf118Q5T5N4 469 aa12.78□□□□□ -0.36
CENPE-207ENST00000515478 NBPF14Q5TI25 921 aa12.78□□□□□ -0.36
CENPE-207ENST00000515478 ZFAND3Q9H8U3 227 aa12.78□□□□□ -0.36
CENPE-207ENST00000515478 ITPKCQ96DU7 683 aa12.77□□□□□ -0.37
CENPE-207ENST00000515478 SOBPA7XYQ1 873 aa12.76□□□□□ -0.37
CENPE-207ENST00000515478 MAN1A2O60476 641 aa12.76□□□□□ -0.37
CENPE-207ENST00000515478 C4orf48Q5BLP8 95 aa12.76□□□□□ -0.37
CENPE-207ENST00000515478 ZSCAN1Q8NBB4 408 aa12.76□□□□□ -0.37
CENPE-207ENST00000515478 KLF16Q9BXK1 252 aaPredicted RBP12.76□□□□□ -0.37
CENPE-207ENST00000515478 LILRB3O75022 631 aa12.75□□□□□ -0.37
CENPE-207ENST00000515478 TUSC1Q2TAM9 212 aa12.75□□□□□ -0.37
CENPE-207ENST00000515478 MAGEB6P1A0A0J9YX57 407 aa12.74□□□□□ -0.37
CENPE-207ENST00000515478 NR3C2P08235 984 aa12.74□□□□□ -0.37
CENPE-207ENST00000515478 BMP2P12643 396 aa12.74□□□□□ -0.37
CENPE-207ENST00000515478 CLK2P49760 499 aaKnown RBP12.74□□□□□ -0.37
CENPE-207ENST00000515478 SLC24A3Q9HC58 644 aa12.74□□□□□ -0.37
CENPE-207ENST00000515478 ERBB4Q15303 1308 aa12.73□□□□□ -0.37
CENPE-207ENST00000515478 FSHRP23945 695 aa12.73□□□□□ -0.37
CENPE-207ENST00000515478 VASH1Q7L8A9 365 aaPredicted RBP12.73□□□□□ -0.37
CENPE-207ENST00000515478 RSPH6AQ9H0K4 717 aa12.72□□□□□ -0.37
CENPE-207ENST00000515478 GRM5P41594 1212 aa12.71□□□□□ -0.37
CENPE-207ENST00000515478 RTL5Q5HYW3 569 aaPredicted RBP12.71□□□□□ -0.37
CENPE-207ENST00000515478 CARD14Q9BXL6 1004 aa12.71□□□□□ -0.37
CENPE-207ENST00000515478 LINC00528Q8N1L1 170 aa12.7□□□□□ -0.38
CENPE-207ENST00000515478 POLR3EQ9NVU0 708 aa12.7□□□□□ -0.38
CENPE-207ENST00000515478 ATP1B4Q9UN42 357 aaPredicted RBP12.68□□□□□ -0.38
CENPE-207ENST00000515478 SH3RF1Q7Z6J0 888 aa12.67□□□□□ -0.38
CENPE-207ENST00000515478 MEIOBQ8N635 442 aa12.67□□□□□ -0.38
CENPE-207ENST00000515478 C1QTNF2Q9BXJ5 285 aa12.67□□□□□ -0.38
CENPE-207ENST00000515478 MAP4K5Q9Y4K4 846 aa12.67□□□□□ -0.38
CENPE-207ENST00000515478 GPKOWQ92917 476 aaPredicted RBP eCLIP12.66□□□□□ -0.38
CENPE-207ENST00000515478 EMILIN1Q9Y6C2 1016 aa12.66□□□□□ -0.38
CENPE-207ENST00000515478 SH3BP5LQ7L8J4 393 aa12.65□□□□□ -0.38
CENPE-207ENST00000515478 CCDC116Q8IYX3 515 aa12.65□□□□□ -0.38
CENPE-207ENST00000515478 TRMT44Q8IYL2 757 aaKnown RBP12.64□□□□□ -0.39
CENPE-207ENST00000515478 TSEN34Q9BSV6 310 aaKnown RBP12.63□□□□□ -0.39
CENPE-207ENST00000515478 CTDSPL2Q05D32 466 aa12.61□□□□□ -0.39
CENPE-207ENST00000515478 ARHGAP9Q9BRR9 750 aa12.61□□□□□ -0.39
CENPE-207ENST00000515478 VSIG8P0DPA2 414 aa12.6□□□□□ -0.39
CENPE-207ENST00000515478 ERFEQ4G0M1 354 aa12.6□□□□□ -0.39
CENPE-207ENST00000515478 PGPEP1Q9NXJ5 209 aa12.6□□□□□ -0.39
CENPE-207ENST00000515478 PPFIA3O75145 1194 aa12.59□□□□□ -0.39
CENPE-207ENST00000515478 LORP23490 312 aaPredicted RBP12.59□□□□□ -0.39
CENPE-207ENST00000515478 SLC10A4Q96EP9 437 aa12.59□□□□□ -0.39
CENPE-207ENST00000515478 SOS2Q07890 1332 aaPredicted RBP12.59□□□□□ -0.39
CENPE-207ENST00000515478 DNMT3LQ9UJW3 386 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms