RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 RIMBP3Q9UFD9 1639 aa9.35□□□□□ -0.91
CAST-243ENST00000515160 PALM3A6NDB9 673 aaPredicted RBP9.35□□□□□ -0.91
CAST-243ENST00000515160 FOXD4L5Q5VV16 416 aaPredicted RBP9.35□□□□□ -0.91
CAST-243ENST00000515160 FOXD4L4Q8WXT5 416 aaPredicted RBP9.35□□□□□ -0.91
CAST-243ENST00000515160 ALG2Q9H553 416 aa9.35□□□□□ -0.91
CAST-243ENST00000515160 MRC2Q9UBG0 1479 aa9.34□□□□□ -0.91
CAST-243ENST00000515160 GPR37L1O60883 481 aa9.34□□□□□ -0.91
CAST-243ENST00000515160 LMOD1P29536 600 aaPredicted RBP9.34□□□□□ -0.91
CAST-243ENST00000515160 SOX11P35716 441 aa9.34□□□□□ -0.91
CAST-243ENST00000515160 GUCA2AQ02747 115 aa9.33□□□□□ -0.92
CAST-243ENST00000515160 LRRN4Q8WUT4 740 aa9.33□□□□□ -0.92
CAST-243ENST00000515160 GFRA3O60609 400 aa9.32□□□□□ -0.92
CAST-243ENST00000515160 HLA-CQ95604 372 aa9.32□□□□□ -0.92
CAST-243ENST00000515160 TFIP11Q9UBB9 837 aaKnown RBP9.32□□□□□ -0.92
CAST-243ENST00000515160 C6orf229H3BNL8 230 aa9.31□□□□□ -0.92
CAST-243ENST00000515160 SLC10A3P09131 477 aa9.31□□□□□ -0.92
CAST-243ENST00000515160 RBM25P49756 843 aaKnown RBP9.31□□□□□ -0.92
CAST-243ENST00000515160 PROX2Q3B8N5 592 aa9.31□□□□□ -0.92
CAST-243ENST00000515160 GRIPAP1Q4V328 841 aa9.31□□□□□ -0.92
CAST-243ENST00000515160 RABGEF1Q9UJ41 708 aa9.31□□□□□ -0.92
CAST-243ENST00000515160 CFAP99D6REC4 459 aa9.3□□□□□ -0.92
CAST-243ENST00000515160 SEMA3FQ13275 785 aa9.3□□□□□ -0.92
CAST-243ENST00000515160 SWT1Q5T5J6 900 aaKnown RBP9.3□□□□□ -0.92
CAST-243ENST00000515160 VRTNQ9H8Y1 702 aa9.3□□□□□ -0.92
CAST-243ENST00000515160 ATG7O95352 703 aa9.29□□□□□ -0.92
CAST-243ENST00000515160 SLC4A3P48751 1232 aa9.29□□□□□ -0.92
CAST-243ENST00000515160 HDGFP51858 240 aaKnown RBP9.29□□□□□ -0.92
CAST-243ENST00000515160 LAPTM4BQ86VI4 370 aa9.29□□□□□ -0.92
CAST-243ENST00000515160 PNMA1Q8ND90 353 aa9.29□□□□□ -0.92
CAST-243ENST00000515160 PRR7Q8TB68 274 aa9.29□□□□□ -0.92
CAST-243ENST00000515160 UCN2Q96RP3 112 aa9.29□□□□□ -0.92
CAST-243ENST00000515160 KIAA1468Q9P260 1216 aa9.29□□□□□ -0.92
CAST-243ENST00000515160 CADPSQ9ULU8 1353 aa9.28□□□□□ -0.92
CAST-243ENST00000515160 CARNS1A5YM72 827 aa9.28□□□□□ -0.92
CAST-243ENST00000515160 SOWAHBA6NEL2 793 aa9.28□□□□□ -0.92
CAST-243ENST00000515160 SLF2Q8IX21 1173 aa9.28□□□□□ -0.92
CAST-243ENST00000515160 EPS8L1Q8TE68 723 aa9.28□□□□□ -0.92
CAST-243ENST00000515160 BCAMP50895 628 aa9.27□□□□□ -0.93
CAST-243ENST00000515160 ARHGEF11O15085 1522 aa9.26□□□□□ -0.93
CAST-243ENST00000515160 NR6A1Q15406 480 aa9.26□□□□□ -0.93
CAST-243ENST00000515160 CCDC27Q2M243 656 aa9.26□□□□□ -0.93
CAST-243ENST00000515160 CDCA8Q53HL2 280 aa9.26□□□□□ -0.93
CAST-243ENST00000515160 ZNF428Q96B54 188 aa9.26□□□□□ -0.93
CAST-243ENST00000515160 ZNF775Q96BV0 537 aaPredicted RBP9.26□□□□□ -0.93
CAST-243ENST00000515160 MAFBQ9Y5Q3 323 aaPredicted RBP9.26□□□□□ -0.93
CAST-243ENST00000515160 IVNS1ABPQ9Y6Y0 642 aa9.26□□□□□ -0.93
CAST-243ENST00000515160 EIF4G2P78344 907 aaKnown RBP eCLIP9.25□□□□□ -0.93
CAST-243ENST00000515160 FUT2Q10981 343 aa9.25□□□□□ -0.93
CAST-243ENST00000515160 TMEM88BA6NKF7 163 aa9.24□□□□□ -0.93
CAST-243ENST00000515160 NRG2O14511 850 aaPredicted RBP9.24□□□□□ -0.93
CAST-243ENST00000515160 ZNF787Q6DD87 383 aa9.24□□□□□ -0.93
CAST-243ENST00000515160 E9PSI1 815 aa9.23□□□□□ -0.93
CAST-243ENST00000515160 TBC1D9Q6ZT07 1266 aa9.23□□□□□ -0.93
CAST-243ENST00000515160 SND1Q7KZF4 910 aaKnown RBP eCLIP9.23□□□□□ -0.93
CAST-243ENST00000515160 MROH2BQ7Z745 1585 aa9.23□□□□□ -0.93
CAST-243ENST00000515160 ATP9BO43861 1147 aa9.22□□□□□ -0.93
CAST-243ENST00000515160 ATP6V1AP38606 617 aa9.22□□□□□ -0.93
CAST-243ENST00000515160 B4GALNT3Q6L9W6 998 aa9.22□□□□□ -0.93
CAST-243ENST00000515160 SYMPKQ92797 1274 aaKnown RBP9.22□□□□□ -0.93
CAST-243ENST00000515160 CFHP08603 1231 aa9.21□□□□□ -0.94
CAST-243ENST00000515160 ZFRQ96KR1 1074 aaKnown RBP9.21□□□□□ -0.94
CAST-243ENST00000515160 WBP1LQ9NX94 342 aa9.21□□□□□ -0.94
CAST-243ENST00000515160 AMOTL2Q9Y2J4 779 aa9.21□□□□□ -0.94
CAST-243ENST00000515160 PER1O15534 1290 aaPredicted RBP9.2□□□□□ -0.94
CAST-243ENST00000515160 SEPT9Q9UHD8 586 aaPredicted RBP9.2□□□□□ -0.94
CAST-243ENST00000515160 CEP164Q9UPV0 1460 aa9.2□□□□□ -0.94
CAST-243ENST00000515160 NR1H3Q13133 447 aa9.19□□□□□ -0.94
CAST-243ENST00000515160 RETREG3Q86VR2 466 aa9.19□□□□□ -0.94
CAST-243ENST00000515160 URB2Q14146 1524 aaKnown RBP9.19□□□□□ -0.94
CAST-243ENST00000515160 DESI1Q6ICB0 168 aa9.18□□□□□ -0.94
CAST-243ENST00000515160 TSR3Q9UJK0 312 aaKnown RBP9.18□□□□□ -0.94
CAST-243ENST00000515160 GNEQ9Y223 722 aaKnown RBP9.18□□□□□ -0.94
CAST-243ENST00000515160 ARAP1Q96P48 1450 aa9.17□□□□□ -0.94
CAST-243ENST00000515160 FANCD2Q9BXW9 1451 aa9.17□□□□□ -0.94
CAST-243ENST00000515160 ELOAQ14241 798 aaKnown RBP9.17□□□□□ -0.94
CAST-243ENST00000515160 FAM98CQ17RN3 349 aaKnown RBP9.17□□□□□ -0.94
CAST-243ENST00000515160 PRKD2Q9BZL6 878 aa9.17□□□□□ -0.94
CAST-243ENST00000515160 KMT5BQ4FZB7 885 aa9.16□□□□□ -0.94
CAST-243ENST00000515160 KANK4Q5T7N3 995 aaPredicted RBP9.16□□□□□ -0.94
CAST-243ENST00000515160 CYB5RLQ6IPT4 315 aa9.16□□□□□ -0.94
CAST-243ENST00000515160 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.16□□□□□ -0.94
CAST-243ENST00000515160 RNF40O75150 1001 aa9.15□□□□□ -0.94
CAST-243ENST00000515160 Q3C1V9 767 aa9.15□□□□□ -0.94
CAST-243ENST00000515160 SAMD7Q7Z3H4 446 aa9.15□□□□□ -0.94
CAST-243ENST00000515160 LRCH3Q96II8 777 aa9.15□□□□□ -0.94
CAST-243ENST00000515160 ZNF608Q9ULD9 1512 aaPredicted RBP9.15□□□□□ -0.95
CAST-243ENST00000515160 ZBBXA8MT70 800 aa9.14□□□□□ -0.95
CAST-243ENST00000515160 LYPD8Q6UX82 237 aa9.14□□□□□ -0.95
CAST-243ENST00000515160 NFATC2IPQ8NCF5 419 aa9.14□□□□□ -0.95
CAST-243ENST00000515160 CCER1Q8TC90 406 aaPredicted RBP9.14□□□□□ -0.95
CAST-243ENST00000515160 HPS5Q9UPZ3 1129 aa9.14□□□□□ -0.95
CAST-243ENST00000515160 V9GY48 417 aaPredicted RBP9.14□□□□□ -0.95
CAST-243ENST00000515160 FBXO45P0C2W1 286 aa9.13□□□□□ -0.95
CAST-243ENST00000515160 USP17L3A6NCW0 530 aa9.12□□□□□ -0.95
CAST-243ENST00000515160 USP17L4A6NCW7 530 aa9.12□□□□□ -0.95
CAST-243ENST00000515160 PIK3CDO00329 1044 aa9.12□□□□□ -0.95
CAST-243ENST00000515160 MORN1Q5T089 497 aa9.12□□□□□ -0.95
CAST-243ENST00000515160 USP17L2Q6R6M4 530 aa9.12□□□□□ -0.95
CAST-243ENST00000515160 USP17L1Q7RTZ2 530 aa9.12□□□□□ -0.95
CAST-243ENST00000515160 ZMIZ1Q9ULJ6 1067 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms