RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 FAM187AA6NFU0 413 aa7.64□□□□□ -1.19
CAST-242ENST00000515063 RC3H1Q5TC82 1133 aaKnown RBP7.64□□□□□ -1.19
CAST-242ENST00000515063 TRAF7Q6Q0C0 670 aa7.64□□□□□ -1.19
CAST-242ENST00000515063 PROCA1Q8NCQ7 364 aaPredicted RBP7.64□□□□□ -1.19
CAST-242ENST00000515063 PER1O15534 1290 aaPredicted RBP7.63□□□□□ -1.19
CAST-242ENST00000515063 NBPF14Q5TI25 921 aa7.63□□□□□ -1.19
CAST-242ENST00000515063 ZNF511Q8NB15 262 aa7.63□□□□□ -1.19
CAST-242ENST00000515063 SNIP1Q8TAD8 396 aaKnown RBP7.63□□□□□ -1.19
CAST-242ENST00000515063 MRGPRX2Q96LB1 330 aa7.63□□□□□ -1.19
CAST-242ENST00000515063 TOR4AQ9NXH8 423 aa7.63□□□□□ -1.19
CAST-242ENST00000515063 MAP10Q9P2G4 905 aa7.63□□□□□ -1.19
CAST-242ENST00000515063 SH3BP2P78314 561 aa7.62□□□□□ -1.19
CAST-242ENST00000515063 SKOR1P84550 965 aa7.62□□□□□ -1.19
CAST-242ENST00000515063 PNMA1Q8ND90 353 aa7.62□□□□□ -1.19
CAST-242ENST00000515063 BAP1Q92560 729 aa7.62□□□□□ -1.19
CAST-242ENST00000515063 LINC01559Q495D7 138 aa7.61□□□□□ -1.19
CAST-242ENST00000515063 GPKOWQ92917 476 aaPredicted RBP eCLIP7.61□□□□□ -1.19
CAST-242ENST00000515063 AP1G2O75843 785 aa7.6□□□□□ -1.19
CAST-242ENST00000515063 VARSP26640 1264 aaKnown RBP7.6□□□□□ -1.19
CAST-242ENST00000515063 RFC5P40937 340 aa7.6□□□□□ -1.19
CAST-242ENST00000515063 CTDSPL2Q05D32 466 aa7.6□□□□□ -1.19
CAST-242ENST00000515063 TMEM259Q4ZIN3 620 aa7.6□□□□□ -1.19
CAST-242ENST00000515063 PRKCSHP14314 528 aaPredicted RBP7.59□□□□□ -1.19
CAST-242ENST00000515063 AGERQ15109 404 aa7.59□□□□□ -1.19
CAST-242ENST00000515063 BPHLQ86WA6 291 aaPredicted RBP7.59□□□□□ -1.19
CAST-242ENST00000515063 CTC1Q2NKJ3 1217 aa7.58□□□□□ -1.2
CAST-242ENST00000515063 FAM174AQ8TBP5 190 aa7.58□□□□□ -1.2
CAST-242ENST00000515063 ZC3H4Q9UPT8 1303 aaKnown RBP7.57□□□□□ -1.2
CAST-242ENST00000515063 AVPP01185 164 aa7.57□□□□□ -1.2
CAST-242ENST00000515063 USP17L8P0C7I0 530 aa7.57□□□□□ -1.2
CAST-242ENST00000515063 MPNDQ8N594 471 aa7.57□□□□□ -1.2
CAST-242ENST00000515063 WASF2Q9Y6W5 498 aa7.57□□□□□ -1.2
CAST-242ENST00000515063 ALDH1A1P00352 501 aa7.56□□□□□ -1.2
CAST-242ENST00000515063 MYT1Q01538 1121 aa7.56□□□□□ -1.2
CAST-242ENST00000515063 CRIPAKQ8N1N5 446 aa7.56□□□□□ -1.2
CAST-242ENST00000515063 LRRN4Q8WUT4 740 aa7.56□□□□□ -1.2
CAST-242ENST00000515063 APBB1O00213 710 aa7.55□□□□□ -1.2
CAST-242ENST00000515063 SIAH2O43255 324 aa7.55□□□□□ -1.2
CAST-242ENST00000515063 SMPD1P17405 629 aa7.55□□□□□ -1.2
CAST-242ENST00000515063 FKBPLQ9UIM3 349 aa7.54□□□□□ -1.2
CAST-242ENST00000515063 J3QL48 77 aa7.53□□□□□ -1.2
CAST-242ENST00000515063 AXIN1O15169 862 aa7.53□□□□□ -1.2
CAST-242ENST00000515063 SMCPP49901 116 aaPredicted RBP7.53□□□□□ -1.2
CAST-242ENST00000515063 NR6A1Q15406 480 aa7.53□□□□□ -1.2
CAST-242ENST00000515063 PDXDC2PQ6P474 469 aa7.53□□□□□ -1.2
CAST-242ENST00000515063 FOXJ1Q92949 421 aa7.53□□□□□ -1.2
CAST-242ENST00000515063 GPSM3Q9Y4H4 160 aa7.53□□□□□ -1.2
CAST-242ENST00000515063 FBXO31Q5XUX0 539 aaPredicted RBP7.52□□□□□ -1.21
CAST-242ENST00000515063 BANK1Q8NDB2 785 aa7.52□□□□□ -1.21
CAST-242ENST00000515063 TLL2Q9Y6L7 1015 aa7.52□□□□□ -1.21
CAST-242ENST00000515063 MAGEB6P1A0A0J9YX57 407 aa7.51□□□□□ -1.21
CAST-242ENST00000515063 SOCS7O14512 581 aa7.51□□□□□ -1.21
CAST-242ENST00000515063 LCE2BO14633 110 aa7.51□□□□□ -1.21
CAST-242ENST00000515063 PTK2Q05397 1052 aa7.51□□□□□ -1.21
CAST-242ENST00000515063 SH3BP5LQ7L8J4 393 aa7.51□□□□□ -1.21
CAST-242ENST00000515063 SH3RF1Q7Z6J0 888 aa7.51□□□□□ -1.21
CAST-242ENST00000515063 ARHGAP9Q9BRR9 750 aa7.51□□□□□ -1.21
CAST-242ENST00000515063 AAASQ9NRG9 546 aa7.51□□□□□ -1.21
CAST-242ENST00000515063 ADH1CP00326 375 aa7.5□□□□□ -1.21
CAST-242ENST00000515063 CDK15Q96Q40 435 aa7.5□□□□□ -1.21
CAST-242ENST00000515063 C1QTNF2Q9BXJ5 285 aa7.5□□□□□ -1.21
CAST-242ENST00000515063 CDV3Q9UKY7 258 aaKnown RBP7.5□□□□□ -1.21
CAST-242ENST00000515063 NR5A1Q13285 461 aa7.49□□□□□ -1.21
CAST-242ENST00000515063 ARID5BQ14865 1188 aa7.49□□□□□ -1.21
CAST-242ENST00000515063 ZBTB33Q86T24 672 aa7.49□□□□□ -1.21
CAST-242ENST00000515063 TRMT44Q8IYL2 757 aaKnown RBP7.49□□□□□ -1.21
CAST-242ENST00000515063 HPS1Q92902 700 aa7.49□□□□□ -1.21
CAST-242ENST00000515063 CARD14Q9BXL6 1004 aa7.49□□□□□ -1.21
CAST-242ENST00000515063 MAP4K5Q9Y4K4 846 aa7.49□□□□□ -1.21
CAST-242ENST00000515063 ST8SIA5O15466 376 aa7.48□□□□□ -1.21
CAST-242ENST00000515063 NNTQ13423 1086 aa7.48□□□□□ -1.21
CAST-242ENST00000515063 C4orf48Q5BLP8 95 aa7.48□□□□□ -1.21
CAST-242ENST00000515063 SLC10A4Q96EP9 437 aa7.48□□□□□ -1.21
CAST-242ENST00000515063 HMX1Q9NP08 348 aaPredicted RBP7.48□□□□□ -1.21
CAST-242ENST00000515063 ZNF787Q6DD87 383 aa7.47□□□□□ -1.21
CAST-242ENST00000515063 PRM3Q9NNZ6 103 aa7.47□□□□□ -1.21
CAST-242ENST00000515063 ERFEQ4G0M1 354 aa7.46□□□□□ -1.22
CAST-242ENST00000515063 VASH1Q7L8A9 365 aaPredicted RBP7.46□□□□□ -1.22
CAST-242ENST00000515063 CAPN5O15484 640 aaPredicted RBP7.45□□□□□ -1.22
CAST-242ENST00000515063 ZNF592Q92610 1267 aa7.45□□□□□ -1.22
CAST-242ENST00000515063 SENP2Q9HC62 589 aa7.45□□□□□ -1.22
CAST-242ENST00000515063 NDUFB9Q9Y6M9 179 aa7.45□□□□□ -1.22
CAST-242ENST00000515063 NBPF20Q3BBV1 942 aa7.44□□□□□ -1.22
CAST-242ENST00000515063 EPS8L1Q8TE68 723 aa7.44□□□□□ -1.22
CAST-242ENST00000515063 TRIM52Q96A61 297 aa7.44□□□□□ -1.22
CAST-242ENST00000515063 TRIM34Q9BYJ4 488 aa7.44□□□□□ -1.22
CAST-242ENST00000515063 FSHRP23945 695 aa7.43□□□□□ -1.22
CAST-242ENST00000515063 WDR4P57081 412 aaKnown RBP7.43□□□□□ -1.22
CAST-242ENST00000515063 ADAM32Q8TC27 787 aa7.43□□□□□ -1.22
CAST-242ENST00000515063 KIFC2Q96AC6 838 aa7.43□□□□□ -1.22
CAST-242ENST00000515063 GJD4Q96KN9 370 aaPredicted RBP7.43□□□□□ -1.22
CAST-242ENST00000515063 ATP13A2Q9NQ11 1180 aa7.43□□□□□ -1.22
CAST-242ENST00000515063 ZNF330Q9Y3S2 320 aaPredicted RBP7.43□□□□□ -1.22
CAST-242ENST00000515063 DHX9Q08211 1270 aaKnown RBP7.42□□□□□ -1.22
CAST-242ENST00000515063 EMILIN1Q9Y6C2 1016 aa7.42□□□□□ -1.22
CAST-242ENST00000515063 ZBBXA8MT70 800 aa7.41□□□□□ -1.22
CAST-242ENST00000515063 GRM5P41594 1212 aa7.41□□□□□ -1.22
CAST-242ENST00000515063 DZIP3Q86Y13 1208 aaKnown RBP7.41□□□□□ -1.22
CAST-242ENST00000515063 CCDC116Q8IYX3 515 aa7.41□□□□□ -1.22
CAST-242ENST00000515063 MTMR14Q8NCE2 650 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms