RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 R3HCC1Q9Y3T6 440 aaKnown RBP17.13■□□□□ 0.33
TSPAN17-208ENST00000514705 NUTM2FA1L443 756 aa17.13■□□□□ 0.33
TSPAN17-208ENST00000514705 CDC45O75419 566 aa17.13■□□□□ 0.33
TSPAN17-208ENST00000514705 SSFA2P28290 1259 aa17.13■□□□□ 0.33
TSPAN17-208ENST00000514705 THEMISQ8N1K5 641 aaPredicted RBP17.13■□□□□ 0.33
TSPAN17-208ENST00000514705 RNF214Q8ND24 703 aa17.12■□□□□ 0.33
TSPAN17-208ENST00000514705 CLCN1P35523 988 aa17.12■□□□□ 0.33
TSPAN17-208ENST00000514705 IDI1Q13907 227 aa17.12■□□□□ 0.33
TSPAN17-208ENST00000514705 NEO1Q92859 1461 aa17.12■□□□□ 0.33
TSPAN17-208ENST00000514705 RPGRIP1LQ68CZ1 1315 aa17.12■□□□□ 0.33
TSPAN17-208ENST00000514705 RBM42Q9BTD8 480 aaKnown RBP17.12■□□□□ 0.33
TSPAN17-208ENST00000514705 TTC37Q6PGP7 1564 aa17.12■□□□□ 0.33
TSPAN17-208ENST00000514705 CEBPAP49715 358 aaPredicted RBP17.12■□□□□ 0.33
TSPAN17-208ENST00000514705 PRPF40AO75400 957 aaKnown RBP17.11■□□□□ 0.33
TSPAN17-208ENST00000514705 KIAA1211Q6ZU35 1233 aa17.11■□□□□ 0.33
TSPAN17-208ENST00000514705 MYO5CQ9NQX4 1742 aa17.11■□□□□ 0.33
TSPAN17-208ENST00000514705 TRIM6-TRIM34B2RNG4 842 aa17.11■□□□□ 0.33
TSPAN17-208ENST00000514705 CT47B1P0C2W7 299 aaPredicted RBP17.11■□□□□ 0.33
TSPAN17-208ENST00000514705 CFAP44Q96MT7 982 aa17.11■□□□□ 0.33
TSPAN17-208ENST00000514705 PKNOX2Q96KN3 472 aa17.1■□□□□ 0.33
TSPAN17-208ENST00000514705 PLA2R1Q13018 1463 aa17.1■□□□□ 0.33
TSPAN17-208ENST00000514705 POLR3AO14802 1390 aaPredicted RBP17.09■□□□□ 0.33
TSPAN17-208ENST00000514705 CIZ1Q9ULV3 898 aaPredicted RBP17.09■□□□□ 0.33
TSPAN17-208ENST00000514705 HAP1P54257 671 aaPredicted RBP17.09■□□□□ 0.33
TSPAN17-208ENST00000514705 NUCB2P80303 420 aa17.09■□□□□ 0.33
TSPAN17-208ENST00000514705 ANTXR1Q9H6X2 564 aa17.09■□□□□ 0.33
TSPAN17-208ENST00000514705 POLR1AO95602 1720 aaPredicted RBP17.09■□□□□ 0.33
TSPAN17-208ENST00000514705 MCCP23508 829 aa17.09■□□□□ 0.33
TSPAN17-208ENST00000514705 ISY1Q9ULR0 285 aaKnown RBP17.08■□□□□ 0.33
TSPAN17-208ENST00000514705 KDM5DQ9BY66 1539 aa17.08■□□□□ 0.33
TSPAN17-208ENST00000514705 GCC1Q96CN9 775 aa17.08■□□□□ 0.32
TSPAN17-208ENST00000514705 SHROOM2Q13796 1616 aa17.08■□□□□ 0.32
TSPAN17-208ENST00000514705 ATP7AQ04656 1500 aa17.08■□□□□ 0.32
TSPAN17-208ENST00000514705 CCDC173Q0VFZ6 552 aa17.08■□□□□ 0.32
TSPAN17-208ENST00000514705 FBLN1P23142 703 aa17.07■□□□□ 0.32
TSPAN17-208ENST00000514705 HDAC1Q13547 482 aaPredicted RBP17.07■□□□□ 0.32
TSPAN17-208ENST00000514705 MPNDQ8N594 471 aa17.07■□□□□ 0.32
TSPAN17-208ENST00000514705 API5Q9BZZ5 524 aaKnown RBP17.07■□□□□ 0.32
TSPAN17-208ENST00000514705 RRP9O43818 475 aaKnown RBP17.07■□□□□ 0.32
TSPAN17-208ENST00000514705 RILPL2Q969X0 211 aa17.06■□□□□ 0.32
TSPAN17-208ENST00000514705 GNAI1P63096 354 aa17.06■□□□□ 0.32
TSPAN17-208ENST00000514705 EIF2AK4Q9P2K8 1649 aaKnown RBP17.06■□□□□ 0.32
TSPAN17-208ENST00000514705 TWISTNBQ3B726 338 aaPredicted RBP17.06■□□□□ 0.32
TSPAN17-208ENST00000514705 INTS3Q68E01 1043 aaKnown RBP17.06■□□□□ 0.32
TSPAN17-208ENST00000514705 TBC1D9Q6ZT07 1266 aa17.06■□□□□ 0.32
TSPAN17-208ENST00000514705 SAMD9LQ8IVG5 1584 aa17.06■□□□□ 0.32
TSPAN17-208ENST00000514705 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.05■□□□□ 0.32
TSPAN17-208ENST00000514705 ARHGEF5Q12774 1597 aa17.05■□□□□ 0.32
TSPAN17-208ENST00000514705 NGDNQ8NEJ9 315 aaKnown RBP17.05■□□□□ 0.32
TSPAN17-208ENST00000514705 PRAM1Q96QH2 718 aa17.05■□□□□ 0.32
TSPAN17-208ENST00000514705 ADCY10Q96PN6 1610 aa17.04■□□□□ 0.32
TSPAN17-208ENST00000514705 NPC1L1Q9UHC9 1359 aa17.04■□□□□ 0.32
TSPAN17-208ENST00000514705 KIAA2012Q0VF49 1180 aa17.04■□□□□ 0.32
TSPAN17-208ENST00000514705 RABEP1Q15276 862 aa17.04■□□□□ 0.32
TSPAN17-208ENST00000514705 CABP1Q9NZU7 370 aa17.04■□□□□ 0.32
TSPAN17-208ENST00000514705 NOS1P29475 1434 aa17.04■□□□□ 0.32
TSPAN17-208ENST00000514705 REC8O95072 547 aa17.03■□□□□ 0.32
TSPAN17-208ENST00000514705 NUCB1Q02818 461 aa17.03■□□□□ 0.32
TSPAN17-208ENST00000514705 HMMRO75330 724 aa17.03■□□□□ 0.32
TSPAN17-208ENST00000514705 LMOD3Q0VAK6 560 aa17.03■□□□□ 0.32
TSPAN17-208ENST00000514705 TPM2P07951 284 aa17.03■□□□□ 0.32
TSPAN17-208ENST00000514705 SMC5Q8IY18 1101 aa17.03■□□□□ 0.32
TSPAN17-208ENST00000514705 PREX2Q70Z35 1606 aa17.02■□□□□ 0.32
TSPAN17-208ENST00000514705 ZSCAN30Q86W11 494 aa17.02■□□□□ 0.32
TSPAN17-208ENST00000514705 CCDC27Q2M243 656 aa17.02■□□□□ 0.32
TSPAN17-208ENST00000514705 BMP2KLQ5H9B9 411 aa17.02■□□□□ 0.32
TSPAN17-208ENST00000514705 SYAP1Q96A49 352 aaPredicted RBP17.02■□□□□ 0.31
TSPAN17-208ENST00000514705 SLC26A8Q96RN1 970 aa17.02■□□□□ 0.31
TSPAN17-208ENST00000514705 DNAJC5Q9H3Z4 198 aa17.02■□□□□ 0.31
TSPAN17-208ENST00000514705 NEK4P51957 841 aa17.01■□□□□ 0.31
TSPAN17-208ENST00000514705 RTF1Q92541 710 aaKnown RBP17.01■□□□□ 0.31
TSPAN17-208ENST00000514705 ATP10AO60312 1499 aa17.01■□□□□ 0.31
TSPAN17-208ENST00000514705 ANO2Q9NQ90 1003 aa17.01■□□□□ 0.31
TSPAN17-208ENST00000514705 ZBTB40Q9NUA8 1239 aa17.01■□□□□ 0.31
TSPAN17-208ENST00000514705 GAS2L2Q8NHY3 880 aa17.01■□□□□ 0.31
TSPAN17-208ENST00000514705 BAG4O95429 457 aaKnown RBP17■□□□□ 0.31
TSPAN17-208ENST00000514705 ANKLE2Q86XL3 938 aa17■□□□□ 0.31
TSPAN17-208ENST00000514705 NECTIN2Q92692 538 aa17■□□□□ 0.31
TSPAN17-208ENST00000514705 ZMYND15Q9H091 742 aa17■□□□□ 0.31
TSPAN17-208ENST00000514705 PRDM15P57071 1507 aaPredicted RBP17■□□□□ 0.31
TSPAN17-208ENST00000514705 OS9Q13438 667 aaPredicted RBP16.99■□□□□ 0.31
TSPAN17-208ENST00000514705 DCTN1Q14203 1278 aa16.99■□□□□ 0.31
TSPAN17-208ENST00000514705 ABCC1P33527 1531 aa16.99■□□□□ 0.31
TSPAN17-208ENST00000514705 SMARCA5O60264 1052 aaPredicted RBP16.99■□□□□ 0.31
TSPAN17-208ENST00000514705 C14orf93Q9H972 538 aaKnown RBP16.99■□□□□ 0.31
TSPAN17-208ENST00000514705 XPCQ01831 940 aaPredicted RBP16.98■□□□□ 0.31
TSPAN17-208ENST00000514705 CFAP74Q9C0B2 1584 aa16.98■□□□□ 0.31
TSPAN17-208ENST00000514705 TRPM1Q7Z4N2 1603 aa16.98■□□□□ 0.31
TSPAN17-208ENST00000514705 RAB3GAP1Q15042 981 aa16.97■□□□□ 0.31
TSPAN17-208ENST00000514705 GAS2L3Q86XJ1 694 aa16.97■□□□□ 0.31
TSPAN17-208ENST00000514705 COG3Q96JB2 828 aa16.97■□□□□ 0.31
TSPAN17-208ENST00000514705 FSD2A1L4K1 749 aa16.97■□□□□ 0.31
TSPAN17-208ENST00000514705 KCNJ4P48050 445 aa16.97■□□□□ 0.31
TSPAN17-208ENST00000514705 SNX21Q969T3 373 aa16.97■□□□□ 0.31
TSPAN17-208ENST00000514705 YEATS2Q9ULM3 1422 aa16.97■□□□□ 0.31
TSPAN17-208ENST00000514705 RBM27Q9P2N5 1060 aaKnown RBP16.97■□□□□ 0.31
TSPAN17-208ENST00000514705 SYCE3A1L190 88 aa16.97■□□□□ 0.31
TSPAN17-208ENST00000514705 FCHSD2O94868 740 aa16.97■□□□□ 0.31
TSPAN17-208ENST00000514705 CDK19Q9BWU1 502 aa16.96■□□□□ 0.31
TSPAN17-208ENST00000514705 STK31Q9BXU1 1019 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms