RNA–Protein interactions for RNA: ENST00000514588.1

CCND3-221, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-221ENST00000514588 NRAPQ86VF7 1730 aa34.95■■■■□ 3.19
CCND3-221ENST00000514588 BTG4Q9NY30 223 aa34.95■■■■□ 3.19
CCND3-221ENST00000514588 NBPF1Q3BBV0 1214 aa34.94■■■■□ 3.18
CCND3-221ENST00000514588 BLMP54132 1417 aaPredicted RBP34.94■■■■□ 3.18
CCND3-221ENST00000514588 COL14A1Q05707 1796 aaKnown RBP34.93■■■■□ 3.18
CCND3-221ENST00000514588 CRYBG1Q9Y4K1 1723 aa34.93■■■■□ 3.18
CCND3-221ENST00000514588 ZRANB1Q9UGI0 708 aa34.91■■■■□ 3.18
CCND3-221ENST00000514588 KRT27Q7Z3Y8 459 aa34.88■■■■□ 3.17
CCND3-221ENST00000514588 POLR3AO14802 1390 aaPredicted RBP34.87■■■■□ 3.17
CCND3-221ENST00000514588 TOPAZ1Q8N9V7 1692 aa34.87■■■■□ 3.17
CCND3-221ENST00000514588 CCDC61Q9Y6R9 512 aa34.87■■■■□ 3.17
CCND3-221ENST00000514588 FAM98CQ17RN3 349 aaKnown RBP34.86■■■■□ 3.17
CCND3-221ENST00000514588 ACEP12821 1306 aa34.85■■■■□ 3.17
CCND3-221ENST00000514588 PRDM11Q9NQV5 511 aa34.85■■■■□ 3.17
CCND3-221ENST00000514588 A0A0G2JS52 829 aa34.83■■■■□ 3.17
CCND3-221ENST00000514588 PLEKHG3A1L390 1219 aa34.83■■■■□ 3.17
CCND3-221ENST00000514588 MYT1Q01538 1121 aa34.83■■■■□ 3.17
CCND3-221ENST00000514588 NBPF8Q3BBV2 869 aa34.83■■■■□ 3.17
CCND3-221ENST00000514588 SPATA31A5Q5VU36 1347 aa34.81■■■■□ 3.16
CCND3-221ENST00000514588 SPATA31A7Q8IWB4 1347 aa34.81■■■■□ 3.16
CCND3-221ENST00000514588 DEFB132Q7Z7B7 95 aa34.81■■■■□ 3.16
CCND3-221ENST00000514588 KIAA0232Q92628 1395 aa34.81■■■■□ 3.16
CCND3-221ENST00000514588 NUTM2GQ5VZR2 741 aa34.8■■■■□ 3.16
CCND3-221ENST00000514588 SF3B2Q13435 895 aaKnown RBP34.79■■■■□ 3.16
CCND3-221ENST00000514588 CENPJQ9HC77 1338 aaPredicted RBP34.79■■■■□ 3.16
CCND3-221ENST00000514588 PHRF1Q9P1Y6 1649 aaKnown RBP34.78■■■■□ 3.16
CCND3-221ENST00000514588 SRCAPQ6ZRS2 3230 aa34.76■■■■□ 3.16
CCND3-221ENST00000514588 CHRNA2Q15822 529 aa34.76■■■■□ 3.16
CCND3-221ENST00000514588 L3MBTL2Q969R5 705 aa34.76■■■■□ 3.16
CCND3-221ENST00000514588 SRPK2P78362 688 aaKnown RBP34.75■■■■□ 3.15
CCND3-221ENST00000514588 ZC3H6P61129 1189 aaKnown RBP34.74■■■■□ 3.15
CCND3-221ENST00000514588 CABP2Q9NPB3 220 aa34.72■■■■□ 3.15
CCND3-221ENST00000514588 PPIP5K1Q6PFW1 1433 aa34.72■■■■□ 3.15
CCND3-221ENST00000514588 ABTB2Q8N961 1025 aa34.71■■■■□ 3.15
CCND3-221ENST00000514588 THSD7AQ9UPZ6 1657 aa34.7■■■■□ 3.15
CCND3-221ENST00000514588 SIN3AQ96ST3 1273 aa34.69■■■■□ 3.14
CCND3-221ENST00000514588 SPATA31A1Q5TZJ5 1347 aa34.69■■■■□ 3.14
CCND3-221ENST00000514588 QRICH2Q9H0J4 1663 aa34.68■■■■□ 3.14
CCND3-221ENST00000514588 STRN4Q9NRL3 753 aa34.68■■■■□ 3.14
CCND3-221ENST00000514588 NRKQ7Z2Y5 1582 aa34.67■■■■□ 3.14
CCND3-221ENST00000514588 USP19O94966 1318 aa34.67■■■■□ 3.14
CCND3-221ENST00000514588 FAM182BQ5T319 152 aa34.66■■■■□ 3.14
CCND3-221ENST00000514588 BAG6P46379 1132 aa34.63■■■■□ 3.13
CCND3-221ENST00000514588 CPDO75976 1380 aa34.62■■■■□ 3.13
CCND3-221ENST00000514588 NLRP13Q86W25 1043 aa34.61■■■■□ 3.13
CCND3-221ENST00000514588 CABP1Q9NZU7 370 aa34.61■■■■□ 3.13
CCND3-221ENST00000514588 TRPM1Q7Z4N2 1603 aa34.61■■■■□ 3.13
CCND3-221ENST00000514588 SSH2Q76I76 1423 aa34.61■■■■□ 3.13
CCND3-221ENST00000514588 BRD4O60885 1362 aaPredicted RBP34.6■■■■□ 3.13
CCND3-221ENST00000514588 CAMTA1Q9Y6Y1 1673 aa34.6■■■■□ 3.13
CCND3-221ENST00000514588 EVA1CP58658 441 aa34.59■■■■□ 3.13
CCND3-221ENST00000514588 NEUROD1Q13562 356 aa34.59■■■■□ 3.13
CCND3-221ENST00000514588 GCP02774 474 aa34.58■■■■□ 3.13
CCND3-221ENST00000514588 LMO7Q8WWI1 1683 aa34.57■■■■□ 3.13
CCND3-221ENST00000514588 USP6P35125 1406 aa34.57■■■■□ 3.13
CCND3-221ENST00000514588 USP35Q9P2H5 1018 aa34.57■■■■□ 3.12
CCND3-221ENST00000514588 RGPD1P0DJD0 1748 aa34.56■■■■□ 3.12
CCND3-221ENST00000514588 EVC2Q86UK5 1308 aa34.55■■■■□ 3.12
CCND3-221ENST00000514588 LARP1Q6PKG0 1096 aaKnown RBP34.55■■■■□ 3.12
CCND3-221ENST00000514588 ROCK2O75116 1388 aaKnown RBP34.54■■■■□ 3.12
CCND3-221ENST00000514588 BARGINQ6ZT62 677 aa34.54■■■■□ 3.12
CCND3-221ENST00000514588 EN1Q05925 392 aaPredicted RBP34.53■■■■□ 3.12
CCND3-221ENST00000514588 DISP2A7MBM2 1401 aa34.5■■■■□ 3.11
CCND3-221ENST00000514588 NLRP6P59044 892 aa34.5■■■■□ 3.11
CCND3-221ENST00000514588 FAM196AQ6ZSG2 479 aa34.49■■■■□ 3.11
CCND3-221ENST00000514588 TNS1Q9HBL0 1735 aaKnown RBP34.48■■■■□ 3.11
CCND3-221ENST00000514588 TCP11L2Q8N4U5 519 aa34.48■■■■□ 3.11
CCND3-221ENST00000514588 COL5A2P05997 1499 aaPredicted RBP34.46■■■■□ 3.11
CCND3-221ENST00000514588 SLIT3O75094 1523 aa34.46■■■■□ 3.11
CCND3-221ENST00000514588 PSDA5PKW4 1024 aaPredicted RBP34.46■■■■□ 3.11
CCND3-221ENST00000514588 TRIM37O94972 964 aa34.45■■■■□ 3.11
CCND3-221ENST00000514588 PDE3BQ13370 1112 aa34.44■■■■□ 3.1
CCND3-221ENST00000514588 ZBTB7CA1YPR0 619 aa34.43■■■■□ 3.1
CCND3-221ENST00000514588 THRAP3Q9Y2W1 955 aaKnown RBP34.43■■■■□ 3.1
CCND3-221ENST00000514588 PIK3C2AO00443 1686 aa34.43■■■■□ 3.1
CCND3-221ENST00000514588 AATKQ6ZMQ8 1374 aa34.42■■■■□ 3.1
CCND3-221ENST00000514588 EZH2Q15910 746 aaKnown RBP34.4■■■■□ 3.1
CCND3-221ENST00000514588 ZNF692Q9BU19 519 aaPredicted RBP34.4■■■■□ 3.1
CCND3-221ENST00000514588 CRB1P82279 1406 aa34.38■■■■□ 3.09
CCND3-221ENST00000514588 TTC21BQ7Z4L5 1316 aa34.38■■■■□ 3.09
CCND3-221ENST00000514588 CAMKK2Q96RR4 588 aa34.38■■■■□ 3.09
CCND3-221ENST00000514588 LRP5O75197 1615 aa34.37■■■■□ 3.09
CCND3-221ENST00000514588 APBA3O96018 575 aa34.35■■■■□ 3.09
CCND3-221ENST00000514588 AKAP12Q02952 1782 aa34.35■■■■□ 3.09
CCND3-221ENST00000514588 CPSF1Q10570 1443 aaKnown RBP34.35■■■■□ 3.09
CCND3-221ENST00000514588 PARP4Q9UKK3 1724 aaKnown RBP34.33■■■■□ 3.09
CCND3-221ENST00000514588 R3HDM1Q15032 1099 aaKnown RBP34.33■■■■□ 3.09
CCND3-221ENST00000514588 COL18A1P39060 1754 aa34.33■■■■□ 3.09
CCND3-221ENST00000514588 SBNO2Q9Y2G9 1366 aa34.32■■■■□ 3.08
CCND3-221ENST00000514588 TTC21AQ8NDW8 1320 aa34.31■■■■□ 3.08
CCND3-221ENST00000514588 AXIN2Q9Y2T1 843 aa34.31■■■■□ 3.08
CCND3-221ENST00000514588 PARD3Q8TEW0 1356 aa34.31■■■■□ 3.08
CCND3-221ENST00000514588 ARHGEF25Q86VW2 580 aa34.3■■■■□ 3.08
CCND3-221ENST00000514588 CARD11Q9BXL7 1154 aa34.3■■■■□ 3.08
CCND3-221ENST00000514588 KTN1Q86UP2 1357 aaKnown RBP34.29■■■■□ 3.08
CCND3-221ENST00000514588 KCNH5Q8NCM2 988 aa34.29■■■■□ 3.08
CCND3-221ENST00000514588 TOM1L2Q6ZVM7 507 aa34.28■■■■□ 3.08
CCND3-221ENST00000514588 WDR17Q8IZU2 1322 aa34.27■■■■□ 3.08
CCND3-221ENST00000514588 SOX12O15370 315 aa34.26■■■■□ 3.08
CCND3-221ENST00000514588 NFAT5O94916 1531 aa34.23■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms