RNA–Protein interactions for RNA: ENST00000514168.1

SMAD1-212, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-212ENST00000514168 EIF4G2P78344 907 aaKnown RBP eCLIP16.71■□□□□ 0.27
SMAD1-212ENST00000514168 QRICH2Q9H0J4 1663 aa16.71■□□□□ 0.27
SMAD1-212ENST00000514168 LRP5O75197 1615 aa16.7■□□□□ 0.26
SMAD1-212ENST00000514168 FAM83GA6ND36 823 aa16.7■□□□□ 0.26
SMAD1-212ENST00000514168 PRAM1Q96QH2 718 aa16.7■□□□□ 0.26
SMAD1-212ENST00000514168 ARHGEF10O15013 1369 aa16.69■□□□□ 0.26
SMAD1-212ENST00000514168 POGKQ9P215 609 aa16.69■□□□□ 0.26
SMAD1-212ENST00000514168 PSME1Q06323 249 aa16.68■□□□□ 0.26
SMAD1-212ENST00000514168 PRR36Q9H6K5 1346 aa16.68■□□□□ 0.26
SMAD1-212ENST00000514168 CENPJQ9HC77 1338 aaPredicted RBP16.68■□□□□ 0.26
SMAD1-212ENST00000514168 COL14A1Q05707 1796 aaKnown RBP16.67■□□□□ 0.26
SMAD1-212ENST00000514168 SAFB2Q14151 953 aaKnown RBP eCLIP16.67■□□□□ 0.26
SMAD1-212ENST00000514168 ST20-MTHFSA0A0A6YYL1 179 aa16.66■□□□□ 0.26
SMAD1-212ENST00000514168 HSPA5P11021 654 aaKnown RBP16.66■□□□□ 0.26
SMAD1-212ENST00000514168 PMFBP1Q8TBY8 1022 aa16.66■□□□□ 0.26
SMAD1-212ENST00000514168 THSD7AQ9UPZ6 1657 aa16.65■□□□□ 0.26
SMAD1-212ENST00000514168 KRT27Q7Z3Y8 459 aa16.65■□□□□ 0.26
SMAD1-212ENST00000514168 TULP4Q9NRJ4 1543 aa16.65■□□□□ 0.26
SMAD1-212ENST00000514168 TNS1Q9HBL0 1735 aaKnown RBP16.63■□□□□ 0.25
SMAD1-212ENST00000514168 SLC24A1O60721 1099 aa16.63■□□□□ 0.25
SMAD1-212ENST00000514168 PLEKHG5O94827 1062 aa16.63■□□□□ 0.25
SMAD1-212ENST00000514168 SBNO2Q9Y2G9 1366 aa16.63■□□□□ 0.25
SMAD1-212ENST00000514168 RGPD1P0DJD0 1748 aa16.62■□□□□ 0.25
SMAD1-212ENST00000514168 HAP1P54257 671 aaPredicted RBP16.62■□□□□ 0.25
SMAD1-212ENST00000514168 MINK1Q8N4C8 1332 aaPredicted RBP16.62■□□□□ 0.25
SMAD1-212ENST00000514168 LMOD2Q6P5Q4 547 aa16.61■□□□□ 0.25
SMAD1-212ENST00000514168 HIRIP3Q9BW71 556 aaPredicted RBP16.61■□□□□ 0.25
SMAD1-212ENST00000514168 FAM98CQ17RN3 349 aaKnown RBP16.6■□□□□ 0.25
SMAD1-212ENST00000514168 TESK2Q96S53 571 aa16.6■□□□□ 0.25
SMAD1-212ENST00000514168 BTG4Q9NY30 223 aa16.6■□□□□ 0.25
SMAD1-212ENST00000514168 CCDC9Q9Y3X0 531 aaKnown RBP16.6■□□□□ 0.25
SMAD1-212ENST00000514168 PHRF1Q9P1Y6 1649 aaKnown RBP16.59■□□□□ 0.25
SMAD1-212ENST00000514168 SPATA31A5Q5VU36 1347 aa16.59■□□□□ 0.25
SMAD1-212ENST00000514168 SPATA31A7Q8IWB4 1347 aa16.59■□□□□ 0.25
SMAD1-212ENST00000514168 ITSN1Q15811 1721 aa16.59■□□□□ 0.25
SMAD1-212ENST00000514168 WASLO00401 505 aaPredicted RBP16.58■□□□□ 0.24
SMAD1-212ENST00000514168 ATP7BP35670 1465 aa16.58■□□□□ 0.24
SMAD1-212ENST00000514168 DISP2A7MBM2 1401 aa16.57■□□□□ 0.24
SMAD1-212ENST00000514168 EVC2Q86UK5 1308 aa16.57■□□□□ 0.24
SMAD1-212ENST00000514168 TMF1P82094 1093 aa16.57■□□□□ 0.24
SMAD1-212ENST00000514168 SF3B2Q13435 895 aaKnown RBP16.57■□□□□ 0.24
SMAD1-212ENST00000514168 TOPAZ1Q8N9V7 1692 aa16.56■□□□□ 0.24
SMAD1-212ENST00000514168 FAM182BQ5T319 152 aa16.56■□□□□ 0.24
SMAD1-212ENST00000514168 PSDA5PKW4 1024 aaPredicted RBP16.55■□□□□ 0.24
SMAD1-212ENST00000514168 BAG6P46379 1132 aa16.54■□□□□ 0.24
SMAD1-212ENST00000514168 EN1Q05925 392 aaPredicted RBP16.54■□□□□ 0.24
SMAD1-212ENST00000514168 CDCA8Q53HL2 280 aa16.53■□□□□ 0.24
SMAD1-212ENST00000514168 CDK19Q9BWU1 502 aa16.53■□□□□ 0.24
SMAD1-212ENST00000514168 SPATA31A1Q5TZJ5 1347 aa16.52■□□□□ 0.24
SMAD1-212ENST00000514168 SRPK2P78362 688 aaKnown RBP16.52■□□□□ 0.24
SMAD1-212ENST00000514168 KIAA0232Q92628 1395 aa16.51■□□□□ 0.23
SMAD1-212ENST00000514168 LMO7Q8WWI1 1683 aa16.51■□□□□ 0.23
SMAD1-212ENST00000514168 PUS7Q96PZ0 661 aaKnown RBP16.51■□□□□ 0.23
SMAD1-212ENST00000514168 NRKQ7Z2Y5 1582 aa16.51■□□□□ 0.23
SMAD1-212ENST00000514168 RREB1Q92766 1687 aa16.5■□□□□ 0.23
SMAD1-212ENST00000514168 A0A0G2JS52 829 aa16.5■□□□□ 0.23
SMAD1-212ENST00000514168 MYT1Q01538 1121 aa16.5■□□□□ 0.23
SMAD1-212ENST00000514168 POLR3AO14802 1390 aaPredicted RBP16.5■□□□□ 0.23
SMAD1-212ENST00000514168 C11orf95C9JLR9 678 aaPredicted RBP16.49■□□□□ 0.23
SMAD1-212ENST00000514168 NGDNQ8NEJ9 315 aaKnown RBP16.49■□□□□ 0.23
SMAD1-212ENST00000514168 NUDT16Q96DE0 195 aaKnown RBP16.49■□□□□ 0.23
SMAD1-212ENST00000514168 CABP2Q9NPB3 220 aa16.49■□□□□ 0.23
SMAD1-212ENST00000514168 PRDM11Q9NQV5 511 aa16.49■□□□□ 0.23
SMAD1-212ENST00000514168 ZNF316A6NFI3 1004 aaPredicted RBP16.48■□□□□ 0.23
SMAD1-212ENST00000514168 CHRNA2Q15822 529 aa16.48■□□□□ 0.23
SMAD1-212ENST00000514168 EZH2Q15910 746 aaKnown RBP16.48■□□□□ 0.23
SMAD1-212ENST00000514168 CAMKK2Q96RR4 588 aa16.48■□□□□ 0.23
SMAD1-212ENST00000514168 CAMTA1Q9Y6Y1 1673 aa16.48■□□□□ 0.23
SMAD1-212ENST00000514168 NUP188Q5SRE5 1749 aa16.48■□□□□ 0.23
SMAD1-212ENST00000514168 PAK3O75914 559 aaPredicted RBP16.47■□□□□ 0.23
SMAD1-212ENST00000514168 POLR3GLQ9BT43 218 aa16.46■□□□□ 0.23
SMAD1-212ENST00000514168 CCDC7Q96M83 1385 aa16.46■□□□□ 0.23
SMAD1-212ENST00000514168 KIF7Q2M1P5 1343 aa16.45■□□□□ 0.22
SMAD1-212ENST00000514168 SSH2Q76I76 1423 aa16.45■□□□□ 0.22
SMAD1-212ENST00000514168 R3HDM1Q15032 1099 aaKnown RBP16.45■□□□□ 0.22
SMAD1-212ENST00000514168 CCDC61Q9Y6R9 512 aa16.45■□□□□ 0.22
SMAD1-212ENST00000514168 MYOM1P52179 1685 aa16.45■□□□□ 0.22
SMAD1-212ENST00000514168 PLEKHG3A1L390 1219 aa16.44■□□□□ 0.22
SMAD1-212ENST00000514168 TRIM37O94972 964 aa16.44■□□□□ 0.22
SMAD1-212ENST00000514168 ZC3H6P61129 1189 aaKnown RBP16.44■□□□□ 0.22
SMAD1-212ENST00000514168 BARGINQ6ZT62 677 aa16.44■□□□□ 0.22
SMAD1-212ENST00000514168 USP19O94966 1318 aa16.44■□□□□ 0.22
SMAD1-212ENST00000514168 ACEP12821 1306 aa16.44■□□□□ 0.22
SMAD1-212ENST00000514168 WASHC2AQ641Q2 1341 aa16.44■□□□□ 0.22
SMAD1-212ENST00000514168 CPDO75976 1380 aa16.43■□□□□ 0.22
SMAD1-212ENST00000514168 PARP4Q9UKK3 1724 aaKnown RBP16.43■□□□□ 0.22
SMAD1-212ENST00000514168 NUTM2GQ5VZR2 741 aa16.43■□□□□ 0.22
SMAD1-212ENST00000514168 FAM196AQ6ZSG2 479 aa16.43■□□□□ 0.22
SMAD1-212ENST00000514168 PEAK1Q9H792 1746 aa16.42■□□□□ 0.22
SMAD1-212ENST00000514168 NINLQ9Y2I6 1382 aa16.42■□□□□ 0.22
SMAD1-212ENST00000514168 STRN4Q9NRL3 753 aa16.42■□□□□ 0.22
SMAD1-212ENST00000514168 PPIP5K1Q6PFW1 1433 aa16.42■□□□□ 0.22
SMAD1-212ENST00000514168 SBF2Q86WG5 1849 aa16.42■□□□□ 0.22
SMAD1-212ENST00000514168 PARD3Q8TEW0 1356 aa16.41■□□□□ 0.22
SMAD1-212ENST00000514168 TMC1Q8TDI8 760 aa16.41■□□□□ 0.22
SMAD1-212ENST00000514168 LARP1Q6PKG0 1096 aaKnown RBP16.4■□□□□ 0.22
SMAD1-212ENST00000514168 CABP1Q9NZU7 370 aa16.4■□□□□ 0.22
SMAD1-212ENST00000514168 AKAP12Q02952 1782 aa16.4■□□□□ 0.22
SMAD1-212ENST00000514168 COL18A1P39060 1754 aa16.39■□□□□ 0.21
SMAD1-212ENST00000514168 SLC12A5Q9H2X9 1139 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms