RNA–Protein interactions for RNA: ENST00000513794.1

TRIM23-207, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-207ENST00000513794 ZNF219Q9P2Y4 722 aaPredicted RBP16.5■□□□□ 0.23
TRIM23-207ENST00000513794 RGPD8O14715 1765 aaPredicted RBP16.5■□□□□ 0.23
TRIM23-207ENST00000513794 ARHGEF28Q8N1W1 1705 aaKnown RBP16.5■□□□□ 0.23
TRIM23-207ENST00000513794 PXDNQ92626 1479 aa16.49■□□□□ 0.23
TRIM23-207ENST00000513794 TRPM1Q7Z4N2 1603 aa16.49■□□□□ 0.23
TRIM23-207ENST00000513794 LRP6O75581 1613 aa16.48■□□□□ 0.23
TRIM23-207ENST00000513794 AFF2P51816 1311 aa16.48■□□□□ 0.23
TRIM23-207ENST00000513794 ST20-MTHFSA0A0A6YYL1 179 aa16.48■□□□□ 0.23
TRIM23-207ENST00000513794 TULP4Q9NRJ4 1543 aa16.48■□□□□ 0.23
TRIM23-207ENST00000513794 NUTM2GQ5VZR2 741 aa16.47■□□□□ 0.23
TRIM23-207ENST00000513794 ADGRB2O60241 1585 aa16.47■□□□□ 0.23
TRIM23-207ENST00000513794 QTRT2Q9H974 415 aaKnown RBP16.46■□□□□ 0.23
TRIM23-207ENST00000513794 SBNO1A3KN83 1393 aa16.46■□□□□ 0.23
TRIM23-207ENST00000513794 SHPRHQ149N8 1683 aa16.45■□□□□ 0.22
TRIM23-207ENST00000513794 RALGAPBQ86X10 1494 aa16.44■□□□□ 0.22
TRIM23-207ENST00000513794 TMC1Q8TDI8 760 aa16.44■□□□□ 0.22
TRIM23-207ENST00000513794 USP21Q9UK80 565 aa16.44■□□□□ 0.22
TRIM23-207ENST00000513794 USP32Q8NFA0 1604 aa16.44■□□□□ 0.22
TRIM23-207ENST00000513794 KIF1AQ12756 1690 aa16.43■□□□□ 0.22
TRIM23-207ENST00000513794 RXRBP28702 533 aa16.43■□□□□ 0.22
TRIM23-207ENST00000513794 ABTB2Q8N961 1025 aa16.43■□□□□ 0.22
TRIM23-207ENST00000513794 PPIP5K1Q6PFW1 1433 aa16.43■□□□□ 0.22
TRIM23-207ENST00000513794 ATP7BP35670 1465 aa16.42■□□□□ 0.22
TRIM23-207ENST00000513794 ARHGEF10O15013 1369 aa16.42■□□□□ 0.22
TRIM23-207ENST00000513794 TNS3Q68CZ2 1445 aa16.42■□□□□ 0.22
TRIM23-207ENST00000513794 ZNF692Q9BU19 519 aaPredicted RBP16.41■□□□□ 0.22
TRIM23-207ENST00000513794 FNBP4Q8N3X1 1017 aaPredicted RBP16.4■□□□□ 0.22
TRIM23-207ENST00000513794 QRICH2Q9H0J4 1663 aa16.4■□□□□ 0.22
TRIM23-207ENST00000513794 POLR3AO14802 1390 aaPredicted RBP16.39■□□□□ 0.21
TRIM23-207ENST00000513794 FAM83GA6ND36 823 aa16.39■□□□□ 0.21
TRIM23-207ENST00000513794 TESK2Q96S53 571 aa16.39■□□□□ 0.21
TRIM23-207ENST00000513794 SLC12A5Q9H2X9 1139 aa16.39■□□□□ 0.21
TRIM23-207ENST00000513794 C1QBPQ07021 282 aaKnown RBP16.38■□□□□ 0.21
TRIM23-207ENST00000513794 NLRP13Q86W25 1043 aa16.38■□□□□ 0.21
TRIM23-207ENST00000513794 NLRP6P59044 892 aa16.37■□□□□ 0.21
TRIM23-207ENST00000513794 ZC3H6P61129 1189 aaKnown RBP16.37■□□□□ 0.21
TRIM23-207ENST00000513794 TMF1P82094 1093 aa16.37■□□□□ 0.21
TRIM23-207ENST00000513794 TRPC5Q9UL62 973 aaPredicted RBP16.37■□□□□ 0.21
TRIM23-207ENST00000513794 ATAD2Q6PL18 1390 aa16.37■□□□□ 0.21
TRIM23-207ENST00000513794 USP47Q96K76 1375 aa16.37■□□□□ 0.21
TRIM23-207ENST00000513794 RBM6P78332 1123 aaKnown RBP16.36■□□□□ 0.21
TRIM23-207ENST00000513794 HDGFL2Q7Z4V5 671 aaPredicted RBP16.35■□□□□ 0.21
TRIM23-207ENST00000513794 UNC5CLQ8IV45 518 aa16.35■□□□□ 0.21
TRIM23-207ENST00000513794 CCDC9Q9Y3X0 531 aaKnown RBP16.35■□□□□ 0.21
TRIM23-207ENST00000513794 SBNO2Q9Y2G9 1366 aa16.35■□□□□ 0.21
TRIM23-207ENST00000513794 ZBTB7CA1YPR0 619 aa16.34■□□□□ 0.21
TRIM23-207ENST00000513794 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.34■□□□□ 0.21
TRIM23-207ENST00000513794 UPF1Q92900 1129 aaKnown RBP eCLIP16.34■□□□□ 0.21
TRIM23-207ENST00000513794 PUS7Q96PZ0 661 aaKnown RBP16.34■□□□□ 0.21
TRIM23-207ENST00000513794 CHRNA2Q15822 529 aa16.33■□□□□ 0.2
TRIM23-207ENST00000513794 POLR3GLQ9BT43 218 aa16.33■□□□□ 0.2
TRIM23-207ENST00000513794 PRDM11Q9NQV5 511 aa16.33■□□□□ 0.2
TRIM23-207ENST00000513794 TERF2IPQ9NYB0 399 aa16.33■□□□□ 0.2
TRIM23-207ENST00000513794 TTC21BQ7Z4L5 1316 aa16.33■□□□□ 0.2
TRIM23-207ENST00000513794 COL22A1Q8NFW1 1626 aaPredicted RBP16.33■□□□□ 0.2
TRIM23-207ENST00000513794 EIF4G2P78344 907 aaKnown RBP eCLIP16.32■□□□□ 0.2
TRIM23-207ENST00000513794 KTN1Q86UP2 1357 aaKnown RBP16.32■□□□□ 0.2
TRIM23-207ENST00000513794 BTG4Q9NY30 223 aa16.32■□□□□ 0.2
TRIM23-207ENST00000513794 ITSN1Q15811 1721 aa16.31■□□□□ 0.2
TRIM23-207ENST00000513794 GCP02774 474 aa16.31■□□□□ 0.2
TRIM23-207ENST00000513794 CDCA8Q53HL2 280 aa16.31■□□□□ 0.2
TRIM23-207ENST00000513794 GJD4Q96KN9 370 aaPredicted RBP16.31■□□□□ 0.2
TRIM23-207ENST00000513794 USP6P35125 1406 aa16.3■□□□□ 0.2
TRIM23-207ENST00000513794 SOX12O15370 315 aa16.3■□□□□ 0.2
TRIM23-207ENST00000513794 HSPA5P11021 654 aaKnown RBP16.3■□□□□ 0.2
TRIM23-207ENST00000513794 EVA1CP58658 441 aa16.3■□□□□ 0.2
TRIM23-207ENST00000513794 SPINK5Q9NQ38 1064 aaPredicted RBP16.3■□□□□ 0.2
TRIM23-207ENST00000513794 BRD4O60885 1362 aaPredicted RBP16.29■□□□□ 0.2
TRIM23-207ENST00000513794 ZRANB1Q9UGI0 708 aa16.29■□□□□ 0.2
TRIM23-207ENST00000513794 BCL9LQ86UU0 1499 aa16.29■□□□□ 0.2
TRIM23-207ENST00000513794 STRN4Q9NRL3 753 aa16.28■□□□□ 0.2
TRIM23-207ENST00000513794 TRPM3Q9HCF6 1732 aaPredicted RBP16.28■□□□□ 0.2
TRIM23-207ENST00000513794 KIAA0232Q92628 1395 aa16.27■□□□□ 0.2
TRIM23-207ENST00000513794 TTC21AQ8NDW8 1320 aa16.27■□□□□ 0.2
TRIM23-207ENST00000513794 NME9Q86XW9 330 aa16.27■□□□□ 0.2
TRIM23-207ENST00000513794 VPS72Q15906 364 aa16.26■□□□□ 0.19
TRIM23-207ENST00000513794 TOPAZ1Q8N9V7 1692 aa16.26■□□□□ 0.19
TRIM23-207ENST00000513794 CPSF1Q10570 1443 aaKnown RBP16.26■□□□□ 0.19
TRIM23-207ENST00000513794 ATRNO75882 1429 aa16.25■□□□□ 0.19
TRIM23-207ENST00000513794 SSH2Q76I76 1423 aa16.25■□□□□ 0.19
TRIM23-207ENST00000513794 SLIT2O94813 1529 aa16.24■□□□□ 0.19
TRIM23-207ENST00000513794 ALS2Q96Q42 1657 aa16.24■□□□□ 0.19
TRIM23-207ENST00000513794 USP19O94966 1318 aa16.24■□□□□ 0.19
TRIM23-207ENST00000513794 A0A0G2JS52 829 aa16.24■□□□□ 0.19
TRIM23-207ENST00000513794 MYT1Q01538 1121 aa16.24■□□□□ 0.19
TRIM23-207ENST00000513794 KCNH5Q8NCM2 988 aa16.24■□□□□ 0.19
TRIM23-207ENST00000513794 CAPN15O75808 1086 aa16.23■□□□□ 0.19
TRIM23-207ENST00000513794 SPDYE4A6NLX3 237 aa16.22■□□□□ 0.19
TRIM23-207ENST00000513794 USP35Q9P2H5 1018 aa16.22■□□□□ 0.19
TRIM23-207ENST00000513794 A0A1W2PP64 1363 aa16.21■□□□□ 0.19
TRIM23-207ENST00000513794 FAM98CQ17RN3 349 aaKnown RBP16.2■□□□□ 0.18
TRIM23-207ENST00000513794 SEPT12Q8IYM1 358 aa16.2■□□□□ 0.18
TRIM23-207ENST00000513794 FBXO3Q9UK99 471 aa16.2■□□□□ 0.18
TRIM23-207ENST00000513794 CD163L1Q9NR16 1453 aa16.2■□□□□ 0.18
TRIM23-207ENST00000513794 NINLQ9Y2I6 1382 aa16.19■□□□□ 0.18
TRIM23-207ENST00000513794 MKRN4PQ13434 485 aaPredicted RBP16.18■□□□□ 0.18
TRIM23-207ENST00000513794 LARP1Q6PKG0 1096 aaKnown RBP16.18■□□□□ 0.18
TRIM23-207ENST00000513794 ARHGEF25Q86VW2 580 aa16.18■□□□□ 0.18
TRIM23-207ENST00000513794 COG3Q96JB2 828 aa16.18■□□□□ 0.18
TRIM23-207ENST00000513794 MARF1Q9Y4F3 1742 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms