RNA–Protein interactions for RNA: ENST00000513785.5

SSBP2-217, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-217ENST00000513785 LILRB3O75022 631 aa11.24□□□□□ -0.61
SSBP2-217ENST00000513785 ATP13A2Q9NQ11 1180 aa11.24□□□□□ -0.61
SSBP2-217ENST00000513785 NUTM2BA6NNL0 878 aaPredicted RBP11.23□□□□□ -0.61
SSBP2-217ENST00000513785 NUTM2EB1AL46 878 aaPredicted RBP11.23□□□□□ -0.61
SSBP2-217ENST00000513785 F12P00748 615 aaPredicted RBP11.23□□□□□ -0.61
SSBP2-217ENST00000513785 RTL5Q5HYW3 569 aaPredicted RBP11.23□□□□□ -0.61
SSBP2-217ENST00000513785 NUTM2DQ5VT03 806 aaPredicted RBP11.23□□□□□ -0.61
SSBP2-217ENST00000513785 NUTM2AQ8IVF1 878 aaPredicted RBP11.23□□□□□ -0.61
SSBP2-217ENST00000513785 POLR3EQ9NVU0 708 aa11.23□□□□□ -0.61
SSBP2-217ENST00000513785 TUSC1Q2TAM9 212 aa11.22□□□□□ -0.61
SSBP2-217ENST00000513785 TSC1Q92574 1164 aa11.22□□□□□ -0.61
SSBP2-217ENST00000513785 BCANQ96GW7 911 aa11.22□□□□□ -0.61
SSBP2-217ENST00000513785 GPBP1L1Q9HC44 474 aaPredicted RBP11.21□□□□□ -0.61
SSBP2-217ENST00000513785 TLL2Q9Y6L7 1015 aa11.21□□□□□ -0.61
SSBP2-217ENST00000513785 SNRPBP14678 240 aaKnown RBP11.19□□□□□ -0.62
SSBP2-217ENST00000513785 CLK2P49760 499 aaKnown RBP11.19□□□□□ -0.62
SSBP2-217ENST00000513785 FOXJ1Q92949 421 aa11.19□□□□□ -0.62
SSBP2-217ENST00000513785 WASF2Q9Y6W5 498 aa11.19□□□□□ -0.62
SSBP2-217ENST00000513785 VARSP26640 1264 aaKnown RBP11.18□□□□□ -0.62
SSBP2-217ENST00000513785 SLC24A1O60721 1099 aa11.17□□□□□ -0.62
SSBP2-217ENST00000513785 RSPH6AQ9H0K4 717 aa11.17□□□□□ -0.62
SSBP2-217ENST00000513785 KDM4CQ9H3R0 1056 aa11.16□□□□□ -0.62
SSBP2-217ENST00000513785 LCE2AQ5TA79 106 aaPredicted RBP11.15□□□□□ -0.62
SSBP2-217ENST00000513785 FBXO31Q5XUX0 539 aaPredicted RBP11.15□□□□□ -0.62
SSBP2-217ENST00000513785 TRIM47Q96LD4 638 aa11.15□□□□□ -0.62
SSBP2-217ENST00000513785 FAM117AQ9C073 453 aa11.15□□□□□ -0.62
SSBP2-217ENST00000513785 CAPN5O15484 640 aaPredicted RBP11.14□□□□□ -0.63
SSBP2-217ENST00000513785 C4orf48Q5BLP8 95 aa11.14□□□□□ -0.63
SSBP2-217ENST00000513785 TREML4Q6UXN2 200 aa11.14□□□□□ -0.63
SSBP2-217ENST00000513785 BMP1P13497 986 aa11.13□□□□□ -0.63
SSBP2-217ENST00000513785 MPNDQ8N594 471 aa11.13□□□□□ -0.63
SSBP2-217ENST00000513785 PLEKHG3A1L390 1219 aa11.12□□□□□ -0.63
SSBP2-217ENST00000513785 TRIM46Q7Z4K8 759 aa11.12□□□□□ -0.63
SSBP2-217ENST00000513785 PROCA1Q8NCQ7 364 aaPredicted RBP11.12□□□□□ -0.63
SSBP2-217ENST00000513785 SENP2Q9HC62 589 aa11.12□□□□□ -0.63
SSBP2-217ENST00000513785 CTDSPL2Q05D32 466 aa11.11□□□□□ -0.63
SSBP2-217ENST00000513785 NNTQ13423 1086 aa11.11□□□□□ -0.63
SSBP2-217ENST00000513785 HELBQ8NG08 1087 aaPredicted RBP11.11□□□□□ -0.63
SSBP2-217ENST00000513785 FAM174AQ8TBP5 190 aa11.11□□□□□ -0.63
SSBP2-217ENST00000513785 AGERQ15109 404 aa11.1□□□□□ -0.63
SSBP2-217ENST00000513785 ARID5BQ14865 1188 aa11.09□□□□□ -0.63
SSBP2-217ENST00000513785 SKIV2LQ15477 1246 aaKnown RBP11.09□□□□□ -0.63
SSBP2-217ENST00000513785 CDK15Q96Q40 435 aa11.09□□□□□ -0.63
SSBP2-217ENST00000513785 ADH1CP00326 375 aa11.07□□□□□ -0.64
SSBP2-217ENST00000513785 NFX1Q12986 1120 aaKnown RBP11.07□□□□□ -0.64
SSBP2-217ENST00000513785 SH3D19Q5HYK7 790 aa11.07□□□□□ -0.64
SSBP2-217ENST00000513785 BPHLQ86WA6 291 aaPredicted RBP11.07□□□□□ -0.64
SSBP2-217ENST00000513785 KLF16Q9BXK1 252 aaPredicted RBP11.07□□□□□ -0.64
SSBP2-217ENST00000513785 WFS1O76024 890 aa11.06□□□□□ -0.64
SSBP2-217ENST00000513785 GRM5P41594 1212 aa11.06□□□□□ -0.64
SSBP2-217ENST00000513785 LRRN4Q8WUT4 740 aa11.06□□□□□ -0.64
SSBP2-217ENST00000513785 KIFC2Q96AC6 838 aa11.06□□□□□ -0.64
SSBP2-217ENST00000513785 DDRGK1Q96HY6 314 aa11.06□□□□□ -0.64
SSBP2-217ENST00000513785 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.06□□□□□ -0.64
SSBP2-217ENST00000513785 TIMP2P16035 220 aa11.05□□□□□ -0.64
SSBP2-217ENST00000513785 WDR4P57081 412 aaKnown RBP11.05□□□□□ -0.64
SSBP2-217ENST00000513785 SH3RF1Q7Z6J0 888 aa11.05□□□□□ -0.64
SSBP2-217ENST00000513785 ARMC2Q8NEN0 867 aa11.05□□□□□ -0.64
SSBP2-217ENST00000513785 NR3C2P08235 984 aa11.04□□□□□ -0.64
SSBP2-217ENST00000513785 SH3BP5LQ7L8J4 393 aa11.04□□□□□ -0.64
SSBP2-217ENST00000513785 LCE2CQ5TA81 110 aa11.03□□□□□ -0.64
SSBP2-217ENST00000513785 ZFP42Q96MM3 310 aa11.03□□□□□ -0.64
SSBP2-217ENST00000513785 ATP1B4Q9UN42 357 aaPredicted RBP11.03□□□□□ -0.64
SSBP2-217ENST00000513785 C1QTNF2Q9BXJ5 285 aa11.02□□□□□ -0.65
SSBP2-217ENST00000513785 MAGEB6P1A0A0J9YX57 407 aa11.01□□□□□ -0.65
SSBP2-217ENST00000513785 TERTO14746 1132 aaKnown RBP11.01□□□□□ -0.65
SSBP2-217ENST00000513785 NBPF14Q5TI25 921 aa11.01□□□□□ -0.65
SSBP2-217ENST00000513785 PPP2R2DQ66LE6 453 aa11.01□□□□□ -0.65
SSBP2-217ENST00000513785 ZFAND3Q9H8U3 227 aa11.01□□□□□ -0.65
SSBP2-217ENST00000513785 NR5A1Q13285 461 aa11□□□□□ -0.65
SSBP2-217ENST00000513785 MRPL14Q6P1L8 145 aaKnown RBP11□□□□□ -0.65
SSBP2-217ENST00000513785 ITPKCQ96DU7 683 aa11□□□□□ -0.65
SSBP2-217ENST00000513785 ZIC2O95409 532 aaPredicted RBP10.99□□□□□ -0.65
SSBP2-217ENST00000513785 NR6A1Q15406 480 aa10.99□□□□□ -0.65
SSBP2-217ENST00000513785 CARD14Q9BXL6 1004 aa10.99□□□□□ -0.65
SSBP2-217ENST00000513785 PURBQ96QR8 312 aaKnown RBP10.98□□□□□ -0.65
SSBP2-217ENST00000513785 AP1G2O75843 785 aa10.97□□□□□ -0.65
SSBP2-217ENST00000513785 ERFEQ4G0M1 354 aa10.96□□□□□ -0.65
SSBP2-217ENST00000513785 TRMT44Q8IYL2 757 aaKnown RBP10.96□□□□□ -0.65
SSBP2-217ENST00000513785 FKBPLQ9UIM3 349 aa10.96□□□□□ -0.65
SSBP2-217ENST00000513785 FSHRP23945 695 aa10.95□□□□□ -0.66
SSBP2-217ENST00000513785 VASH1Q7L8A9 365 aaPredicted RBP10.95□□□□□ -0.66
SSBP2-217ENST00000513785 EPS8L1Q8TE68 723 aa10.95□□□□□ -0.66
SSBP2-217ENST00000513785 GPKOWQ92917 476 aaPredicted RBP eCLIP10.95□□□□□ -0.66
SSBP2-217ENST00000513785 PDXDC2PQ6P474 469 aa10.94□□□□□ -0.66
SSBP2-217ENST00000513785 NXF1Q9UBU9 619 aaKnown RBP10.94□□□□□ -0.66
SSBP2-217ENST00000513785 MAP4K5Q9Y4K4 846 aa10.94□□□□□ -0.66
SSBP2-217ENST00000513785 SOBPA7XYQ1 873 aa10.93□□□□□ -0.66
SSBP2-217ENST00000513785 VEGFBP49765 207 aa10.93□□□□□ -0.66
SSBP2-217ENST00000513785 SCARF1Q14162 830 aa10.93□□□□□ -0.66
SSBP2-217ENST00000513785 OCSTAMPQ9BR26 566 aa10.93□□□□□ -0.66
SSBP2-217ENST00000513785 HMX1Q9NP08 348 aaPredicted RBP10.93□□□□□ -0.66
SSBP2-217ENST00000513785 ARHGAP9Q9BRR9 750 aa10.92□□□□□ -0.66
SSBP2-217ENST00000513785 RFC5P40937 340 aa10.91□□□□□ -0.66
SSBP2-217ENST00000513785 C6orf118Q5T5N4 469 aa10.91□□□□□ -0.66
SSBP2-217ENST00000513785 IL27Q8NEV9 243 aa10.91□□□□□ -0.66
SSBP2-217ENST00000513785 WIPF1O43516 503 aa10.9□□□□□ -0.66
SSBP2-217ENST00000513785 NEUROD2Q15784 382 aa10.9□□□□□ -0.66
SSBP2-217ENST00000513785 USP17L8P0C7I0 530 aa10.89□□□□□ -0.67
SSBP2-217ENST00000513785 CCDC116Q8IYX3 515 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms