RNA–Protein interactions for RNA: ENST00000513557.5

GYPB-214, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 277 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-214ENST00000513557 UCN2Q96RP3 112 aa7.16□□□□□ -1.26
GYPB-214ENST00000513557 TFIP11Q9UBB9 837 aaKnown RBP7.16□□□□□ -1.26
GYPB-214ENST00000513557 ZC3H4Q9UPT8 1303 aaKnown RBP7.16□□□□□ -1.26
GYPB-214ENST00000513557 LMOD1P29536 600 aaPredicted RBP7.15□□□□□ -1.26
GYPB-214ENST00000513557 COPS2P61201 443 aa7.15□□□□□ -1.26
GYPB-214ENST00000513557 SPSB2Q99619 263 aa7.15□□□□□ -1.26
GYPB-214ENST00000513557 DXOO77932 396 aaKnown RBP7.14□□□□□ -1.27
GYPB-214ENST00000513557 CCNYL3P0C7X3 344 aa7.14□□□□□ -1.27
GYPB-214ENST00000513557 SRPK2P78362 688 aaKnown RBP7.14□□□□□ -1.27
GYPB-214ENST00000513557 THSD4Q6ZMP0 1018 aa7.14□□□□□ -1.27
GYPB-214ENST00000513557 AEBP1Q8IUX7 1158 aa7.14□□□□□ -1.27
GYPB-214ENST00000513557 CSB-PGBD3P0DP91 1061 aa7.13□□□□□ -1.27
GYPB-214ENST00000513557 NYAP1Q6ZVC0 841 aa7.13□□□□□ -1.27
GYPB-214ENST00000513557 FAM160A2Q8N612 972 aaPredicted RBP7.13□□□□□ -1.27
GYPB-214ENST00000513557 ARMC2Q8NEN0 867 aa7.13□□□□□ -1.27
GYPB-214ENST00000513557 NUDT12Q9BQG2 462 aa7.13□□□□□ -1.27
GYPB-214ENST00000513557 EVA1BQ9NVM1 165 aa7.13□□□□□ -1.27
GYPB-214ENST00000513557 MAFBQ9Y5Q3 323 aaPredicted RBP7.13□□□□□ -1.27
GYPB-214ENST00000513557 ATP9BO43861 1147 aa7.12□□□□□ -1.27
GYPB-214ENST00000513557 MMP16P51512 607 aa7.12□□□□□ -1.27
GYPB-214ENST00000513557 TBC1D9Q6ZT07 1266 aa7.12□□□□□ -1.27
GYPB-214ENST00000513557 KCTD12Q96CX2 325 aaKnown RBP7.12□□□□□ -1.27
GYPB-214ENST00000513557 USTQ9Y2C2 406 aa7.12□□□□□ -1.27
GYPB-214ENST00000513557 PTK2Q05397 1052 aa7.11□□□□□ -1.27
GYPB-214ENST00000513557 KCNH2Q12809 1159 aa7.11□□□□□ -1.27
GYPB-214ENST00000513557 NBPF14Q5TI25 921 aa7.11□□□□□ -1.27
GYPB-214ENST00000513557 GPKOWQ92917 476 aaPredicted RBP eCLIP7.11□□□□□ -1.27
GYPB-214ENST00000513557 PRDM9Q9NQV7 894 aa7.11□□□□□ -1.27
GYPB-214ENST00000513557 GPSM3Q9Y4H4 160 aa7.11□□□□□ -1.27
GYPB-214ENST00000513557 ZPR1O75312 459 aa7.1□□□□□ -1.27
GYPB-214ENST00000513557 ADH1BP00325 375 aa7.1□□□□□ -1.27
GYPB-214ENST00000513557 CDCA8Q53HL2 280 aa7.1□□□□□ -1.27
GYPB-214ENST00000513557 PDXDC2PQ6P474 469 aa7.1□□□□□ -1.27
GYPB-214ENST00000513557 ZNF592Q92610 1267 aa7.1□□□□□ -1.27
GYPB-214ENST00000513557 KRTAP3-3Q9BYR6 98 aa7.1□□□□□ -1.27
GYPB-214ENST00000513557 KRTAP3-2Q9BYR7 98 aa7.1□□□□□ -1.27
GYPB-214ENST00000513557 CCDC9Q9Y3X0 531 aaKnown RBP7.1□□□□□ -1.27
GYPB-214ENST00000513557 TLL1O43897 1013 aa7.09□□□□□ -1.27
GYPB-214ENST00000513557 ATG7O95352 703 aa7.09□□□□□ -1.27
GYPB-214ENST00000513557 NFATC2IPQ8NCF5 419 aa7.09□□□□□ -1.27
GYPB-214ENST00000513557 PIK3CDO00329 1044 aa7.08□□□□□ -1.28
GYPB-214ENST00000513557 MTRQ99707 1265 aa7.08□□□□□ -1.28
GYPB-214ENST00000513557 SKIP12755 728 aa7.07□□□□□ -1.28
GYPB-214ENST00000513557 MCCD1P59942 119 aaPredicted RBP7.07□□□□□ -1.28
GYPB-214ENST00000513557 CCDC24Q8N4L8 307 aa7.07□□□□□ -1.28
GYPB-214ENST00000513557 VRTNQ9H8Y1 702 aa7.07□□□□□ -1.28
GYPB-214ENST00000513557 PCDHB9Q9Y5E1 797 aa7.07□□□□□ -1.28
GYPB-214ENST00000513557 USP17L3A6NCW0 530 aa7.06□□□□□ -1.28
GYPB-214ENST00000513557 USP17L4A6NCW7 530 aa7.06□□□□□ -1.28
GYPB-214ENST00000513557 USP17L5A8MUK1 530 aa7.06□□□□□ -1.28
GYPB-214ENST00000513557 PATL2C9JE40 543 aaKnown RBP7.06□□□□□ -1.28
GYPB-214ENST00000513557 BRD1O95696 1058 aa7.06□□□□□ -1.28
GYPB-214ENST00000513557 USP17L2Q6R6M4 530 aa7.06□□□□□ -1.28
GYPB-214ENST00000513557 USP17L1Q7RTZ2 530 aa7.06□□□□□ -1.28
GYPB-214ENST00000513557 ARHGAP9Q9BRR9 750 aa7.06□□□□□ -1.28
GYPB-214ENST00000513557 UNC93B1Q9H1C4 597 aa7.06□□□□□ -1.28
GYPB-214ENST00000513557 IL21Q9HBE4 155 aa7.06□□□□□ -1.28
GYPB-214ENST00000513557 PTPN5P54829 565 aa7.05□□□□□ -1.28
GYPB-214ENST00000513557 SLFNL1Q499Z3 407 aa7.05□□□□□ -1.28
GYPB-214ENST00000513557 KANK4Q5T7N3 995 aaPredicted RBP7.05□□□□□ -1.28
GYPB-214ENST00000513557 PLEKHM2Q8IWE5 1019 aa7.05□□□□□ -1.28
GYPB-214ENST00000513557 ADAM32Q8TC27 787 aa7.05□□□□□ -1.28
GYPB-214ENST00000513557 OCSTAMPQ9BR26 566 aa7.05□□□□□ -1.28
GYPB-214ENST00000513557 SLC6A16Q9GZN6 736 aa7.05□□□□□ -1.28
GYPB-214ENST00000513557 CEP126Q9P2H0 1117 aa7.05□□□□□ -1.28
GYPB-214ENST00000513557 POTEMA6NI47 508 aa7.04□□□□□ -1.28
GYPB-214ENST00000513557 TJAP1Q5JTD0 557 aa7.04□□□□□ -1.28
GYPB-214ENST00000513557 ZBTB33Q86T24 672 aa7.04□□□□□ -1.28
GYPB-214ENST00000513557 RNF135Q8IUD6 432 aa7.04□□□□□ -1.28
GYPB-214ENST00000513557 FAM174AQ8TBP5 190 aa7.04□□□□□ -1.28
GYPB-214ENST00000513557 ZNF516Q92618 1163 aa7.04□□□□□ -1.28
GYPB-214ENST00000513557 MYT1LQ9UL68 1186 aa7.04□□□□□ -1.28
GYPB-214ENST00000513557 CARNS1A5YM72 827 aa7.03□□□□□ -1.28
GYPB-214ENST00000513557 KCNA1Q09470 495 aa7.03□□□□□ -1.28
GYPB-214ENST00000513557 PTCRAQ6ISU1 281 aaPredicted RBP7.03□□□□□ -1.28
GYPB-214ENST00000513557 DEPDC4Q8N2C3 294 aa7.03□□□□□ -1.28
GYPB-214ENST00000513557 GZF1Q9H116 711 aaPredicted RBP7.03□□□□□ -1.28
GYPB-214ENST00000513557 TMEM88BA6NKF7 163 aa7.02□□□□□ -1.29
GYPB-214ENST00000513557 SH3BP5LQ7L8J4 393 aa7.02□□□□□ -1.29
GYPB-214ENST00000513557 PHTF2Q8N3S3 785 aa7.02□□□□□ -1.29
GYPB-214ENST00000513557 CARD14Q9BXL6 1004 aa7.02□□□□□ -1.29
GYPB-214ENST00000513557 NISCHQ9Y2I1 1504 aa7.01□□□□□ -1.29
GYPB-214ENST00000513557 MAGEB6P1A0A0J9YX57 407 aa7.01□□□□□ -1.29
GYPB-214ENST00000513557 NCOA4Q13772 614 aa7.01□□□□□ -1.29
GYPB-214ENST00000513557 ELOAQ14241 798 aaKnown RBP7.01□□□□□ -1.29
GYPB-214ENST00000513557 TMCO4Q5TGY1 634 aa7.01□□□□□ -1.29
GYPB-214ENST00000513557 DZIP3Q86Y13 1208 aaKnown RBP7.01□□□□□ -1.29
GYPB-214ENST00000513557 PLPP7Q8NBV4 271 aa7.01□□□□□ -1.29
GYPB-214ENST00000513557 MKRN1Q9UHC7 482 aaKnown RBP7.01□□□□□ -1.29
GYPB-214ENST00000513557 FAM196BA6NMK8 535 aa7□□□□□ -1.29
GYPB-214ENST00000513557 LZTS3O60299 673 aaPredicted RBP7□□□□□ -1.29
GYPB-214ENST00000513557 S1PR4O95977 384 aa7□□□□□ -1.29
GYPB-214ENST00000513557 AGERQ15109 404 aa7□□□□□ -1.29
GYPB-214ENST00000513557 MAP7D1Q3KQU3 841 aa7□□□□□ -1.29
GYPB-214ENST00000513557 BPHLQ86WA6 291 aaPredicted RBP7□□□□□ -1.29
GYPB-214ENST00000513557 BAP1Q92560 729 aa7□□□□□ -1.29
GYPB-214ENST00000513557 NOVA2Q9UNW9 492 aaKnown RBP7□□□□□ -1.29
GYPB-214ENST00000513557 FCF1Q9Y324 198 aaKnown RBP7□□□□□ -1.29
GYPB-214ENST00000513557 ATP5J2-PTCD1G3V325 749 aa6.99□□□□□ -1.29
GYPB-214ENST00000513557 RASA1P20936 1047 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms