RNA–Protein interactions for RNA: ENST00000513507.5

APBB3-220, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 3

Gene APBB3, Length 723 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-220ENST00000513507 ONECUT3O60422 494 aaPredicted RBP22.4■■□□□ 1.18
APBB3-220ENST00000513507 NBPF8Q3BBV2 869 aa22.4■■□□□ 1.18
APBB3-220ENST00000513507 RALGAPBQ86X10 1494 aa22.4■■□□□ 1.18
APBB3-220ENST00000513507 BRD4O60885 1362 aaPredicted RBP22.39■■□□□ 1.18
APBB3-220ENST00000513507 ACEP12821 1306 aa22.39■■□□□ 1.18
APBB3-220ENST00000513507 FAM83GA6ND36 823 aa22.39■■□□□ 1.17
APBB3-220ENST00000513507 NEUROD1Q13562 356 aa22.39■■□□□ 1.17
APBB3-220ENST00000513507 VPS72Q15906 364 aa22.39■■□□□ 1.17
APBB3-220ENST00000513507 PHRF1Q9P1Y6 1649 aaKnown RBP22.37■■□□□ 1.17
APBB3-220ENST00000513507 LMOD2Q6P5Q4 547 aa22.36■■□□□ 1.17
APBB3-220ENST00000513507 BRWD3Q6RI45 1802 aa22.35■■□□□ 1.17
APBB3-220ENST00000513507 ROCK2O75116 1388 aaKnown RBP22.35■■□□□ 1.17
APBB3-220ENST00000513507 SBNO2Q9Y2G9 1366 aa22.35■■□□□ 1.17
APBB3-220ENST00000513507 HAP1P54257 671 aaPredicted RBP22.34■■□□□ 1.17
APBB3-220ENST00000513507 ATAD2Q6PL18 1390 aa22.34■■□□□ 1.17
APBB3-220ENST00000513507 PPIP5K1Q6PFW1 1433 aa22.33■■□□□ 1.17
APBB3-220ENST00000513507 CABP2Q9NPB3 220 aa22.32■■□□□ 1.16
APBB3-220ENST00000513507 SSH2Q76I76 1423 aa22.31■■□□□ 1.16
APBB3-220ENST00000513507 SRPK2P78362 688 aaKnown RBP22.31■■□□□ 1.16
APBB3-220ENST00000513507 EP400Q96L91 3159 aa22.31■■□□□ 1.16
APBB3-220ENST00000513507 USP19O94966 1318 aa22.31■■□□□ 1.16
APBB3-220ENST00000513507 EVC2Q86UK5 1308 aa22.31■■□□□ 1.16
APBB3-220ENST00000513507 PAK3O75914 559 aaPredicted RBP22.3■■□□□ 1.16
APBB3-220ENST00000513507 AKAP12Q02952 1782 aa22.29■■□□□ 1.16
APBB3-220ENST00000513507 USP6P35125 1406 aa22.28■■□□□ 1.16
APBB3-220ENST00000513507 NRKQ7Z2Y5 1582 aa22.27■■□□□ 1.16
APBB3-220ENST00000513507 CCDC125Q86Z20 511 aa22.27■■□□□ 1.16
APBB3-220ENST00000513507 BTG4Q9NY30 223 aa22.27■■□□□ 1.16
APBB3-220ENST00000513507 CABP1Q9NZU7 370 aa22.27■■□□□ 1.16
APBB3-220ENST00000513507 CPDO75976 1380 aa22.26■■□□□ 1.15
APBB3-220ENST00000513507 LMO7Q8WWI1 1683 aa22.25■■□□□ 1.15
APBB3-220ENST00000513507 KIAA0232Q92628 1395 aa22.25■■□□□ 1.15
APBB3-220ENST00000513507 TONSLQ96HA7 1378 aa22.25■■□□□ 1.15
APBB3-220ENST00000513507 CPSF1Q10570 1443 aaKnown RBP22.24■■□□□ 1.15
APBB3-220ENST00000513507 SPATA31A5Q5VU36 1347 aa22.24■■□□□ 1.15
APBB3-220ENST00000513507 SPATA31A7Q8IWB4 1347 aa22.24■■□□□ 1.15
APBB3-220ENST00000513507 NLRP13Q86W25 1043 aa22.23■■□□□ 1.15
APBB3-220ENST00000513507 SEPT12Q8IYM1 358 aa22.23■■□□□ 1.15
APBB3-220ENST00000513507 ABTB2Q8N961 1025 aa22.23■■□□□ 1.15
APBB3-220ENST00000513507 ZNF692Q9BU19 519 aaPredicted RBP22.23■■□□□ 1.15
APBB3-220ENST00000513507 SLIT3O75094 1523 aa22.22■■□□□ 1.15
APBB3-220ENST00000513507 PUS7Q96PZ0 661 aaKnown RBP22.22■■□□□ 1.15
APBB3-220ENST00000513507 PRDM11Q9NQV5 511 aa22.22■■□□□ 1.15
APBB3-220ENST00000513507 THSD7AQ9UPZ6 1657 aa22.22■■□□□ 1.15
APBB3-220ENST00000513507 PIK3C2AO00443 1686 aa22.21■■□□□ 1.15
APBB3-220ENST00000513507 PLEKHG5O94827 1062 aa22.21■■□□□ 1.15
APBB3-220ENST00000513507 CARD11Q9BXL7 1154 aa22.21■■□□□ 1.15
APBB3-220ENST00000513507 GCP02774 474 aa22.19■■□□□ 1.14
APBB3-220ENST00000513507 CAMTA1Q9Y6Y1 1673 aa22.19■■□□□ 1.14
APBB3-220ENST00000513507 MON2Q7Z3U7 1717 aa22.19■■□□□ 1.14
APBB3-220ENST00000513507 NUTM2GQ5VZR2 741 aa22.18■■□□□ 1.14
APBB3-220ENST00000513507 COL18A1P39060 1754 aa22.17■■□□□ 1.14
APBB3-220ENST00000513507 USP54Q70EL1 1684 aa22.17■■□□□ 1.14
APBB3-220ENST00000513507 SPATA31A1Q5TZJ5 1347 aa22.17■■□□□ 1.14
APBB3-220ENST00000513507 ZC3H6P61129 1189 aaKnown RBP22.16■■□□□ 1.14
APBB3-220ENST00000513507 BLMP54132 1417 aaPredicted RBP22.15■■□□□ 1.14
APBB3-220ENST00000513507 CHRNA2Q15822 529 aa22.15■■□□□ 1.14
APBB3-220ENST00000513507 KRT27Q7Z3Y8 459 aa22.15■■□□□ 1.14
APBB3-220ENST00000513507 CCDC9Q9Y3X0 531 aaKnown RBP22.15■■□□□ 1.14
APBB3-220ENST00000513507 CD163L1Q9NR16 1453 aa22.15■■□□□ 1.14
APBB3-220ENST00000513507 TTC21BQ7Z4L5 1316 aa22.14■■□□□ 1.14
APBB3-220ENST00000513507 TTC21AQ8NDW8 1320 aa22.14■■□□□ 1.14
APBB3-220ENST00000513507 CLSPNQ9HAW4 1339 aa22.13■■□□□ 1.13
APBB3-220ENST00000513507 FAM98CQ17RN3 349 aaKnown RBP22.13■■□□□ 1.13
APBB3-220ENST00000513507 TESK2Q96S53 571 aa22.13■■□□□ 1.13
APBB3-220ENST00000513507 TIMELESSQ9UNS1 1208 aa22.13■■□□□ 1.13
APBB3-220ENST00000513507 AATKQ6ZMQ8 1374 aa22.12■■□□□ 1.13
APBB3-220ENST00000513507 NLRP6P59044 892 aa22.12■■□□□ 1.13
APBB3-220ENST00000513507 BARGINQ6ZT62 677 aa22.12■■□□□ 1.13
APBB3-220ENST00000513507 SLC24A1O60721 1099 aa22.11■■□□□ 1.13
APBB3-220ENST00000513507 USP31Q70CQ4 1352 aa22.1■■□□□ 1.13
APBB3-220ENST00000513507 COL5A2P05997 1499 aaPredicted RBP22.09■■□□□ 1.13
APBB3-220ENST00000513507 KTN1Q86UP2 1357 aaKnown RBP22.08■■□□□ 1.12
APBB3-220ENST00000513507 THRAP3Q9Y2W1 955 aaKnown RBP22.07■■□□□ 1.12
APBB3-220ENST00000513507 NFAT5O94916 1531 aa22.06■■□□□ 1.12
APBB3-220ENST00000513507 ABCC6O95255 1503 aa22.06■■□□□ 1.12
APBB3-220ENST00000513507 PARP4Q9UKK3 1724 aaKnown RBP22.06■■□□□ 1.12
APBB3-220ENST00000513507 ARHGEF25Q86VW2 580 aa22.06■■□□□ 1.12
APBB3-220ENST00000513507 KCNH5Q8NCM2 988 aa22.06■■□□□ 1.12
APBB3-220ENST00000513507 RGPD5Q99666 1765 aa22.05■■□□□ 1.12
APBB3-220ENST00000513507 ST20-MTHFSA0A0A6YYL1 179 aa22.05■■□□□ 1.12
APBB3-220ENST00000513507 LARP1Q6PKG0 1096 aaKnown RBP22.05■■□□□ 1.12
APBB3-220ENST00000513507 RGPD1P0DJD0 1748 aa22.05■■□□□ 1.12
APBB3-220ENST00000513507 NINLQ9Y2I6 1382 aa22.04■■□□□ 1.12
APBB3-220ENST00000513507 EVA1CP58658 441 aa22.04■■□□□ 1.12
APBB3-220ENST00000513507 STRN4Q9NRL3 753 aa22.04■■□□□ 1.12
APBB3-220ENST00000513507 TCP11L2Q8N4U5 519 aa22.03■■□□□ 1.12
APBB3-220ENST00000513507 SLC12A5Q9H2X9 1139 aa22.03■■□□□ 1.12
APBB3-220ENST00000513507 CRB1P82279 1406 aa22.03■■□□□ 1.12
APBB3-220ENST00000513507 DISP2A7MBM2 1401 aa22.02■■□□□ 1.12
APBB3-220ENST00000513507 EDC4Q6P2E9 1401 aaKnown RBP22.02■■□□□ 1.12
APBB3-220ENST00000513507 TNS1Q9HBL0 1735 aaKnown RBP22.02■■□□□ 1.12
APBB3-220ENST00000513507 AXIN2Q9Y2T1 843 aa22.01■■□□□ 1.11
APBB3-220ENST00000513507 WNK3Q9BYP7 1800 aa22■■□□□ 1.11
APBB3-220ENST00000513507 A0A1W2PP64 1363 aa21.99■■□□□ 1.11
APBB3-220ENST00000513507 TERF2IPQ9NYB0 399 aa21.99■■□□□ 1.11
APBB3-220ENST00000513507 HDGFL2Q7Z4V5 671 aaPredicted RBP21.98■■□□□ 1.11
APBB3-220ENST00000513507 A0A0G2JS52 829 aa21.97■■□□□ 1.11
APBB3-220ENST00000513507 MYT1Q01538 1121 aa21.97■■□□□ 1.11
APBB3-220ENST00000513507 FAM196AQ6ZSG2 479 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms