RNA–Protein interactions for RNA: ENST00000513453.5

SIL1-214, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 5

Gene SIL1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-214ENST00000513453 L3MBTL2Q969R5 705 aa22.79■■□□□ 1.24
SIL1-214ENST00000513453 COL14A1Q05707 1796 aaKnown RBP22.78■■□□□ 1.24
SIL1-214ENST00000513453 VPS72Q15906 364 aa22.78■■□□□ 1.24
SIL1-214ENST00000513453 TRPM1Q7Z4N2 1603 aa22.78■■□□□ 1.24
SIL1-214ENST00000513453 PHRF1Q9P1Y6 1649 aaKnown RBP22.77■■□□□ 1.24
SIL1-214ENST00000513453 PAK3O75914 559 aaPredicted RBP22.76■■□□□ 1.23
SIL1-214ENST00000513453 POLR3AO14802 1390 aaPredicted RBP22.75■■□□□ 1.23
SIL1-214ENST00000513453 ACEP12821 1306 aa22.73■■□□□ 1.23
SIL1-214ENST00000513453 CENPJQ9HC77 1338 aaPredicted RBP22.73■■□□□ 1.23
SIL1-214ENST00000513453 BTG4Q9NY30 223 aa22.72■■□□□ 1.23
SIL1-214ENST00000513453 CCDC61Q9Y6R9 512 aa22.72■■□□□ 1.23
SIL1-214ENST00000513453 PLEKHG3A1L390 1219 aa22.71■■□□□ 1.23
SIL1-214ENST00000513453 NEUROD1Q13562 356 aa22.71■■□□□ 1.23
SIL1-214ENST00000513453 NBPF8Q3BBV2 869 aa22.71■■□□□ 1.23
SIL1-214ENST00000513453 SEPT12Q8IYM1 358 aa22.71■■□□□ 1.23
SIL1-214ENST00000513453 CCDC9Q9Y3X0 531 aaKnown RBP22.71■■□□□ 1.23
SIL1-214ENST00000513453 ONECUT3O60422 494 aaPredicted RBP22.7■■□□□ 1.22
SIL1-214ENST00000513453 NUTM2GQ5VZR2 741 aa22.69■■□□□ 1.22
SIL1-214ENST00000513453 CABP2Q9NPB3 220 aa22.69■■□□□ 1.22
SIL1-214ENST00000513453 PPIP5K1Q6PFW1 1433 aa22.67■■□□□ 1.22
SIL1-214ENST00000513453 SRPK2P78362 688 aaKnown RBP22.67■■□□□ 1.22
SIL1-214ENST00000513453 KIAA0232Q92628 1395 aa22.66■■□□□ 1.22
SIL1-214ENST00000513453 NRKQ7Z2Y5 1582 aa22.66■■□□□ 1.22
SIL1-214ENST00000513453 PRDM11Q9NQV5 511 aa22.65■■□□□ 1.22
SIL1-214ENST00000513453 CHRNA2Q15822 529 aa22.64■■□□□ 1.21
SIL1-214ENST00000513453 FAM98CQ17RN3 349 aaKnown RBP22.64■■□□□ 1.21
SIL1-214ENST00000513453 CCDC125Q86Z20 511 aa22.63■■□□□ 1.21
SIL1-214ENST00000513453 SPATA31A5Q5VU36 1347 aa22.62■■□□□ 1.21
SIL1-214ENST00000513453 SPATA31A7Q8IWB4 1347 aa22.62■■□□□ 1.21
SIL1-214ENST00000513453 THSD7AQ9UPZ6 1657 aa22.62■■□□□ 1.21
SIL1-214ENST00000513453 ZC3H6P61129 1189 aaKnown RBP22.62■■□□□ 1.21
SIL1-214ENST00000513453 BLMP54132 1417 aaPredicted RBP22.62■■□□□ 1.21
SIL1-214ENST00000513453 ROCK2O75116 1388 aaKnown RBP22.62■■□□□ 1.21
SIL1-214ENST00000513453 KRT27Q7Z3Y8 459 aa22.61■■□□□ 1.21
SIL1-214ENST00000513453 ABTB2Q8N961 1025 aa22.6■■□□□ 1.21
SIL1-214ENST00000513453 USP19O94966 1318 aa22.59■■□□□ 1.21
SIL1-214ENST00000513453 LMO7Q8WWI1 1683 aa22.59■■□□□ 1.21
SIL1-214ENST00000513453 A0A0G2JS52 829 aa22.59■■□□□ 1.21
SIL1-214ENST00000513453 MYT1Q01538 1121 aa22.59■■□□□ 1.21
SIL1-214ENST00000513453 CABP1Q9NZU7 370 aa22.59■■□□□ 1.21
SIL1-214ENST00000513453 CAMTA1Q9Y6Y1 1673 aa22.58■■□□□ 1.2
SIL1-214ENST00000513453 USP6P35125 1406 aa22.57■■□□□ 1.2
SIL1-214ENST00000513453 DEFB132Q7Z7B7 95 aa22.57■■□□□ 1.2
SIL1-214ENST00000513453 AKAP12Q02952 1782 aa22.57■■□□□ 1.2
SIL1-214ENST00000513453 PIK3C2AO00443 1686 aa22.56■■□□□ 1.2
SIL1-214ENST00000513453 STRN4Q9NRL3 753 aa22.56■■□□□ 1.2
SIL1-214ENST00000513453 SPATA31A1Q5TZJ5 1347 aa22.56■■□□□ 1.2
SIL1-214ENST00000513453 EVC2Q86UK5 1308 aa22.56■■□□□ 1.2
SIL1-214ENST00000513453 SSH2Q76I76 1423 aa22.55■■□□□ 1.2
SIL1-214ENST00000513453 CPDO75976 1380 aa22.54■■□□□ 1.2
SIL1-214ENST00000513453 FAM182BQ5T319 152 aa22.54■■□□□ 1.2
SIL1-214ENST00000513453 NLRP13Q86W25 1043 aa22.53■■□□□ 1.2
SIL1-214ENST00000513453 BRD4O60885 1362 aaPredicted RBP22.52■■□□□ 1.2
SIL1-214ENST00000513453 SLIT3O75094 1523 aa22.52■■□□□ 1.19
SIL1-214ENST00000513453 GCP02774 474 aa22.51■■□□□ 1.19
SIL1-214ENST00000513453 ZRANB1Q9UGI0 708 aa22.51■■□□□ 1.19
SIL1-214ENST00000513453 RGPD1P0DJD0 1748 aa22.51■■□□□ 1.19
SIL1-214ENST00000513453 TNS1Q9HBL0 1735 aaKnown RBP22.5■■□□□ 1.19
SIL1-214ENST00000513453 COL18A1P39060 1754 aa22.49■■□□□ 1.19
SIL1-214ENST00000513453 NLRP6P59044 892 aa22.48■■□□□ 1.19
SIL1-214ENST00000513453 SF3B2Q13435 895 aaKnown RBP22.48■■□□□ 1.19
SIL1-214ENST00000513453 LARP1Q6PKG0 1096 aaKnown RBP22.48■■□□□ 1.19
SIL1-214ENST00000513453 USP35Q9P2H5 1018 aa22.48■■□□□ 1.19
SIL1-214ENST00000513453 SRCAPQ6ZRS2 3230 aa22.48■■□□□ 1.19
SIL1-214ENST00000513453 EVA1CP58658 441 aa22.47■■□□□ 1.19
SIL1-214ENST00000513453 MON2Q7Z3U7 1717 aa22.47■■□□□ 1.19
SIL1-214ENST00000513453 COL5A2P05997 1499 aaPredicted RBP22.47■■□□□ 1.19
SIL1-214ENST00000513453 RGPD5Q99666 1765 aa22.46■■□□□ 1.19
SIL1-214ENST00000513453 TONSLQ96HA7 1378 aa22.46■■□□□ 1.19
SIL1-214ENST00000513453 CARD11Q9BXL7 1154 aa22.45■■□□□ 1.18
SIL1-214ENST00000513453 SBNO2Q9Y2G9 1366 aa22.45■■□□□ 1.18
SIL1-214ENST00000513453 CPSF1Q10570 1443 aaKnown RBP22.45■■□□□ 1.18
SIL1-214ENST00000513453 TTC21BQ7Z4L5 1316 aa22.44■■□□□ 1.18
SIL1-214ENST00000513453 ZBTB7CA1YPR0 619 aa22.43■■□□□ 1.18
SIL1-214ENST00000513453 BARGINQ6ZT62 677 aa22.43■■□□□ 1.18
SIL1-214ENST00000513453 PARP4Q9UKK3 1724 aaKnown RBP22.42■■□□□ 1.18
SIL1-214ENST00000513453 AATKQ6ZMQ8 1374 aa22.41■■□□□ 1.18
SIL1-214ENST00000513453 TRIM26Q12899 539 aaPredicted RBP22.41■■□□□ 1.18
SIL1-214ENST00000513453 ZNF692Q9BU19 519 aaPredicted RBP22.41■■□□□ 1.18
SIL1-214ENST00000513453 CD163L1Q9NR16 1453 aa22.41■■□□□ 1.18
SIL1-214ENST00000513453 BAG6P46379 1132 aa22.4■■□□□ 1.18
SIL1-214ENST00000513453 TCP11L2Q8N4U5 519 aa22.4■■□□□ 1.18
SIL1-214ENST00000513453 KTN1Q86UP2 1357 aaKnown RBP22.39■■□□□ 1.18
SIL1-214ENST00000513453 WNK3Q9BYP7 1800 aa22.39■■□□□ 1.17
SIL1-214ENST00000513453 EN1Q05925 392 aaPredicted RBP22.39■■□□□ 1.17
SIL1-214ENST00000513453 NFAT5O94916 1531 aa22.38■■□□□ 1.17
SIL1-214ENST00000513453 AXIN2Q9Y2T1 843 aa22.38■■□□□ 1.17
SIL1-214ENST00000513453 CRB1P82279 1406 aa22.38■■□□□ 1.17
SIL1-214ENST00000513453 TTC21AQ8NDW8 1320 aa22.37■■□□□ 1.17
SIL1-214ENST00000513453 USP54Q70EL1 1684 aa22.37■■□□□ 1.17
SIL1-214ENST00000513453 DISP2A7MBM2 1401 aa22.37■■□□□ 1.17
SIL1-214ENST00000513453 SOX12O15370 315 aa22.36■■□□□ 1.17
SIL1-214ENST00000513453 TRIM37O94972 964 aa22.36■■□□□ 1.17
SIL1-214ENST00000513453 FAM196AQ6ZSG2 479 aa22.36■■□□□ 1.17
SIL1-214ENST00000513453 LRRC37A3O60309 1634 aa22.35■■□□□ 1.17
SIL1-214ENST00000513453 ARHGEF25Q86VW2 580 aa22.35■■□□□ 1.17
SIL1-214ENST00000513453 THRAP3Q9Y2W1 955 aaKnown RBP22.35■■□□□ 1.17
SIL1-214ENST00000513453 PEAK1Q9H792 1746 aa22.34■■□□□ 1.17
SIL1-214ENST00000513453 PDE3BQ13370 1112 aa22.33■■□□□ 1.17
SIL1-214ENST00000513453 SLC12A5Q9H2X9 1139 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms