RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 PPIP5K1Q6PFW1 1433 aa10.58□□□□□ -0.72
HMGXB3-204ENST00000513318 KIF20BQ96Q89 1820 aa10.58□□□□□ -0.72
HMGXB3-204ENST00000513318 NUTM2FA1L443 756 aa10.58□□□□□ -0.72
HMGXB3-204ENST00000513318 NUDT16Q96DE0 195 aaKnown RBP10.58□□□□□ -0.72
HMGXB3-204ENST00000513318 CABP2Q9NPB3 220 aa10.58□□□□□ -0.72
HMGXB3-204ENST00000513318 COL16A1Q07092 1604 aaPredicted RBP10.58□□□□□ -0.72
HMGXB3-204ENST00000513318 ALS2Q96Q42 1657 aa10.57□□□□□ -0.72
HMGXB3-204ENST00000513318 CLEC11AQ9Y240 323 aa10.57□□□□□ -0.72
HMGXB3-204ENST00000513318 CCDC61Q9Y6R9 512 aa10.57□□□□□ -0.72
HMGXB3-204ENST00000513318 BRINP3Q76B58 766 aa10.56□□□□□ -0.72
HMGXB3-204ENST00000513318 ANKRD26Q9UPS8 1709 aa10.55□□□□□ -0.72
HMGXB3-204ENST00000513318 POLR3AO14802 1390 aaPredicted RBP10.55□□□□□ -0.72
HMGXB3-204ENST00000513318 SHPRHQ149N8 1683 aa10.55□□□□□ -0.72
HMGXB3-204ENST00000513318 USP54Q70EL1 1684 aa10.55□□□□□ -0.72
HMGXB3-204ENST00000513318 PIP4K2BP78356 416 aa10.55□□□□□ -0.72
HMGXB3-204ENST00000513318 ESCO1Q5FWF5 840 aa10.55□□□□□ -0.72
HMGXB3-204ENST00000513318 ORAI2Q96SN7 254 aa10.55□□□□□ -0.72
HMGXB3-204ENST00000513318 PHF8Q9UPP1 1060 aa10.55□□□□□ -0.72
HMGXB3-204ENST00000513318 PXDNQ92626 1479 aa10.55□□□□□ -0.72
HMGXB3-204ENST00000513318 ABCA3Q99758 1704 aa10.54□□□□□ -0.72
HMGXB3-204ENST00000513318 CRYBG1Q9Y4K1 1723 aa10.54□□□□□ -0.72
HMGXB3-204ENST00000513318 CD163L1Q9NR16 1453 aa10.54□□□□□ -0.72
HMGXB3-204ENST00000513318 KIF7Q2M1P5 1343 aa10.54□□□□□ -0.72
HMGXB3-204ENST00000513318 NPHP3Q7Z494 1330 aa10.54□□□□□ -0.72
HMGXB3-204ENST00000513318 CCDC7Q96M83 1385 aa10.53□□□□□ -0.72
HMGXB3-204ENST00000513318 MARF1Q9Y4F3 1742 aaKnown RBP10.53□□□□□ -0.72
HMGXB3-204ENST00000513318 CPSF1Q10570 1443 aaKnown RBP10.53□□□□□ -0.72
HMGXB3-204ENST00000513318 PLEKHG3A1L390 1219 aa10.53□□□□□ -0.72
HMGXB3-204ENST00000513318 FBXO41Q8TF61 875 aa10.53□□□□□ -0.72
HMGXB3-204ENST00000513318 FBXO3Q9UK99 471 aa10.53□□□□□ -0.72
HMGXB3-204ENST00000513318 COL22A1Q8NFW1 1626 aaPredicted RBP10.53□□□□□ -0.72
HMGXB3-204ENST00000513318 PIK3C2AO00443 1686 aa10.53□□□□□ -0.72
HMGXB3-204ENST00000513318 USP6P35125 1406 aa10.52□□□□□ -0.73
HMGXB3-204ENST00000513318 C11orf95C9JLR9 678 aaPredicted RBP10.52□□□□□ -0.73
HMGXB3-204ENST00000513318 PMFBP1Q8TBY8 1022 aa10.52□□□□□ -0.73
HMGXB3-204ENST00000513318 A0A1W2PP64 1363 aa10.52□□□□□ -0.73
HMGXB3-204ENST00000513318 BRD4O60885 1362 aaPredicted RBP10.52□□□□□ -0.73
HMGXB3-204ENST00000513318 ANKRD36BQ8N2N9 1353 aa10.52□□□□□ -0.73
HMGXB3-204ENST00000513318 PHRF1Q9P1Y6 1649 aaKnown RBP10.51□□□□□ -0.73
HMGXB3-204ENST00000513318 FOXO3O43524 673 aa10.51□□□□□ -0.73
HMGXB3-204ENST00000513318 CHRDL2Q6WN34 429 aa10.51□□□□□ -0.73
HMGXB3-204ENST00000513318 NGDNQ8NEJ9 315 aaKnown RBP10.51□□□□□ -0.73
HMGXB3-204ENST00000513318 TMC1Q8TDI8 760 aa10.51□□□□□ -0.73
HMGXB3-204ENST00000513318 POLR3GLQ9BT43 218 aa10.51□□□□□ -0.73
HMGXB3-204ENST00000513318 CABP1Q9NZU7 370 aa10.51□□□□□ -0.73
HMGXB3-204ENST00000513318 ACEP12821 1306 aa10.51□□□□□ -0.73
HMGXB3-204ENST00000513318 WASHC2AQ641Q2 1341 aa10.51□□□□□ -0.73
HMGXB3-204ENST00000513318 HDGFL2Q7Z4V5 671 aaPredicted RBP10.5□□□□□ -0.73
HMGXB3-204ENST00000513318 SLC12A5Q9H2X9 1139 aa10.5□□□□□ -0.73
HMGXB3-204ENST00000513318 TERF2IPQ9NYB0 399 aa10.5□□□□□ -0.73
HMGXB3-204ENST00000513318 MED1Q15648 1581 aaPredicted RBP10.5□□□□□ -0.73
HMGXB3-204ENST00000513318 SOS2Q07890 1332 aaPredicted RBP10.5□□□□□ -0.73
HMGXB3-204ENST00000513318 SBNO1A3KN83 1393 aa10.5□□□□□ -0.73
HMGXB3-204ENST00000513318 KTN1Q86UP2 1357 aaKnown RBP10.5□□□□□ -0.73
HMGXB3-204ENST00000513318 TNS3Q68CZ2 1445 aa10.5□□□□□ -0.73
HMGXB3-204ENST00000513318 EDC4Q6P2E9 1401 aaKnown RBP10.5□□□□□ -0.73
HMGXB3-204ENST00000513318 LTN1O94822 1766 aa10.48□□□□□ -0.73
HMGXB3-204ENST00000513318 PRR29P0C7W0 189 aa10.48□□□□□ -0.73
HMGXB3-204ENST00000513318 PSME1Q06323 249 aa10.48□□□□□ -0.73
HMGXB3-204ENST00000513318 KRT28Q7Z3Y7 464 aa10.48□□□□□ -0.73
HMGXB3-204ENST00000513318 DDX17Q92841 729 aaKnown RBP10.48□□□□□ -0.73
HMGXB3-204ENST00000513318 SSH2Q76I76 1423 aa10.48□□□□□ -0.73
HMGXB3-204ENST00000513318 MAP2P11137 1827 aaKnown RBP10.47□□□□□ -0.73
HMGXB3-204ENST00000513318 ARHGEF10O15013 1369 aa10.47□□□□□ -0.73
HMGXB3-204ENST00000513318 NSD3Q9BZ95 1437 aa10.47□□□□□ -0.73
HMGXB3-204ENST00000513318 ZNF316A6NFI3 1004 aaPredicted RBP10.46□□□□□ -0.73
HMGXB3-204ENST00000513318 XPCQ01831 940 aaPredicted RBP10.46□□□□□ -0.73
HMGXB3-204ENST00000513318 LRRC59Q96AG4 307 aaKnown RBP10.46□□□□□ -0.73
HMGXB3-204ENST00000513318 SPATA31A3Q5VYP0 1347 aa10.46□□□□□ -0.73
HMGXB3-204ENST00000513318 TTC21AQ8NDW8 1320 aa10.46□□□□□ -0.73
HMGXB3-204ENST00000513318 PNPLA6Q8IY17 1366 aa10.45□□□□□ -0.74
HMGXB3-204ENST00000513318 HSPA1LP34931 641 aa10.45□□□□□ -0.74
HMGXB3-204ENST00000513318 SLIT3O75094 1523 aa10.44□□□□□ -0.74
HMGXB3-204ENST00000513318 JCADQ9P266 1359 aa10.44□□□□□ -0.74
HMGXB3-204ENST00000513318 TTC21BQ7Z4L5 1316 aa10.44□□□□□ -0.74
HMGXB3-204ENST00000513318 RGPD5Q99666 1765 aa10.44□□□□□ -0.74
HMGXB3-204ENST00000513318 OVOS2A0A0J9YW53 1432 aa10.43□□□□□ -0.74
HMGXB3-204ENST00000513318 OVOS2Q6IE36 1432 aa10.43□□□□□ -0.74
HMGXB3-204ENST00000513318 PAK3O75914 559 aaPredicted RBP10.43□□□□□ -0.74
HMGXB3-204ENST00000513318 VASPP50552 380 aaPredicted RBP10.43□□□□□ -0.74
HMGXB3-204ENST00000513318 PANK3Q9H999 370 aa10.43□□□□□ -0.74
HMGXB3-204ENST00000513318 PLCH1Q4KWH8 1693 aa10.43□□□□□ -0.74
HMGXB3-204ENST00000513318 FXR2P51116 673 aaKnown RBP eCLIP10.42□□□□□ -0.74
HMGXB3-204ENST00000513318 NWD2Q9ULI1 1742 aa10.41□□□□□ -0.74
HMGXB3-204ENST00000513318 NSD2O96028 1365 aa10.41□□□□□ -0.74
HMGXB3-204ENST00000513318 USP31Q70CQ4 1352 aa10.41□□□□□ -0.74
HMGXB3-204ENST00000513318 CGNL1Q0VF96 1302 aa10.41□□□□□ -0.74
HMGXB3-204ENST00000513318 LMOD2Q6P5Q4 547 aa10.41□□□□□ -0.74
HMGXB3-204ENST00000513318 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.41□□□□□ -0.74
HMGXB3-204ENST00000513318 ABTB2Q8N961 1025 aa10.41□□□□□ -0.74
HMGXB3-204ENST00000513318 CARD14Q9BXL6 1004 aa10.41□□□□□ -0.74
HMGXB3-204ENST00000513318 USP19O94966 1318 aa10.4□□□□□ -0.74
HMGXB3-204ENST00000513318 SPATA31A6Q5VVP1 1343 aa10.4□□□□□ -0.74
HMGXB3-204ENST00000513318 COL14A1Q05707 1796 aaKnown RBP10.4□□□□□ -0.74
HMGXB3-204ENST00000513318 NFAT5O94916 1531 aa10.4□□□□□ -0.74
HMGXB3-204ENST00000513318 NLRP13Q86W25 1043 aa10.4□□□□□ -0.74
HMGXB3-204ENST00000513318 KNSTRNQ9Y448 316 aa10.4□□□□□ -0.74
HMGXB3-204ENST00000513318 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.4□□□□□ -0.74
HMGXB3-204ENST00000513318 NPC1L1Q9UHC9 1359 aa10.39□□□□□ -0.75
HMGXB3-204ENST00000513318 COL18A1P39060 1754 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms