RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 CTHP32929 405 aa5.22□□□□□ -1.57
SMN1-208ENST00000513228 TPRNQ4KMQ1 711 aa5.22□□□□□ -1.57
SMN1-208ENST00000513228 PRR7Q8TB68 274 aa5.22□□□□□ -1.57
SMN1-208ENST00000513228 NUDT12Q9BQG2 462 aa5.22□□□□□ -1.57
SMN1-208ENST00000513228 SENP2Q9HC62 589 aa5.22□□□□□ -1.57
SMN1-208ENST00000513228 ATP13A2Q9NQ11 1180 aa5.22□□□□□ -1.57
SMN1-208ENST00000513228 NXF1Q9UBU9 619 aaKnown RBP5.22□□□□□ -1.57
SMN1-208ENST00000513228 PCDHGC3Q9UN70 934 aa5.22□□□□□ -1.57
SMN1-208ENST00000513228 TTC24A2A3L6 582 aaPredicted RBP5.21□□□□□ -1.58
SMN1-208ENST00000513228 RPIAP49247 311 aa5.21□□□□□ -1.58
SMN1-208ENST00000513228 NEUROD2Q15784 382 aa5.21□□□□□ -1.58
SMN1-208ENST00000513228 RSBN1LQ6PCB5 846 aaPredicted RBP5.21□□□□□ -1.58
SMN1-208ENST00000513228 CYP4X1Q8N118 509 aa5.21□□□□□ -1.58
SMN1-208ENST00000513228 RSPH6AQ9H0K4 717 aa5.21□□□□□ -1.58
SMN1-208ENST00000513228 KDM4CQ9H3R0 1056 aa5.21□□□□□ -1.58
SMN1-208ENST00000513228 ZBTB3Q9H5J0 574 aa5.21□□□□□ -1.58
SMN1-208ENST00000513228 SPDYE5A6NIY4 337 aa5.2□□□□□ -1.58
SMN1-208ENST00000513228 DXOO77932 396 aaKnown RBP5.2□□□□□ -1.58
SMN1-208ENST00000513228 CABLES1Q8TDN4 633 aa5.2□□□□□ -1.58
SMN1-208ENST00000513228 PKD2L1Q9P0L9 805 aa5.2□□□□□ -1.58
SMN1-208ENST00000513228 PCDHB15Q9Y5E8 787 aa5.2□□□□□ -1.58
SMN1-208ENST00000513228 ADAM23O75077 832 aa5.19□□□□□ -1.58
SMN1-208ENST00000513228 CCNYL3P0C7X3 344 aa5.19□□□□□ -1.58
SMN1-208ENST00000513228 MMP16P51512 607 aa5.19□□□□□ -1.58
SMN1-208ENST00000513228 TRIM32Q13049 653 aa5.19□□□□□ -1.58
SMN1-208ENST00000513228 MYSM1Q5VVJ2 828 aa5.19□□□□□ -1.58
SMN1-208ENST00000513228 DDRGK1Q96HY6 314 aa5.19□□□□□ -1.58
SMN1-208ENST00000513228 SPTLC1O15269 473 aa5.18□□□□□ -1.58
SMN1-208ENST00000513228 HRCP23327 699 aa5.18□□□□□ -1.58
SMN1-208ENST00000513228 CLK2P49760 499 aaKnown RBP5.18□□□□□ -1.58
SMN1-208ENST00000513228 LINC01559Q495D7 138 aa5.18□□□□□ -1.58
SMN1-208ENST00000513228 NPAS3Q8IXF0 933 aa5.18□□□□□ -1.58
SMN1-208ENST00000513228 HELBQ8NG08 1087 aaPredicted RBP5.18□□□□□ -1.58
SMN1-208ENST00000513228 TOR4AQ9NXH8 423 aa5.18□□□□□ -1.58
SMN1-208ENST00000513228 AGERQ15109 404 aa5.17□□□□□ -1.58
SMN1-208ENST00000513228 PTPRNQ16849 979 aa5.17□□□□□ -1.58
SMN1-208ENST00000513228 EHBP1Q8NDI1 1231 aa5.17□□□□□ -1.58
SMN1-208ENST00000513228 KIFC2Q96AC6 838 aa5.17□□□□□ -1.58
SMN1-208ENST00000513228 KRTAP4-7Q9BYR0 210 aa5.17□□□□□ -1.58
SMN1-208ENST00000513228 FAM117AQ9C073 453 aa5.17□□□□□ -1.58
SMN1-208ENST00000513228 LIMD1Q9UGP4 676 aa5.17□□□□□ -1.58
SMN1-208ENST00000513228 QPCTQ16769 361 aa5.16□□□□□ -1.58
SMN1-208ENST00000513228 Q8N3U1 123 aa5.16□□□□□ -1.58
SMN1-208ENST00000513228 IL27Q8NEV9 243 aa5.16□□□□□ -1.58
SMN1-208ENST00000513228 ERBB4Q15303 1308 aa5.16□□□□□ -1.58
SMN1-208ENST00000513228 CFAP99D6REC4 459 aa5.15□□□□□ -1.59
SMN1-208ENST00000513228 RNF225M0QZC1 329 aaPredicted RBP5.15□□□□□ -1.59
SMN1-208ENST00000513228 GJA5P36382 358 aa5.15□□□□□ -1.59
SMN1-208ENST00000513228 KCNH2Q12809 1159 aa5.15□□□□□ -1.59
SMN1-208ENST00000513228 RC3H1Q5TC82 1133 aaKnown RBP5.15□□□□□ -1.59
SMN1-208ENST00000513228 PRPF38BQ5VTL8 546 aaKnown RBP5.15□□□□□ -1.59
SMN1-208ENST00000513228 UNC93B1Q9H1C4 597 aa5.15□□□□□ -1.59
SMN1-208ENST00000513228 DNMT3AQ9Y6K1 912 aaPredicted RBP5.15□□□□□ -1.59
SMN1-208ENST00000513228 H3BM21 787 aa5.14□□□□□ -1.59
SMN1-208ENST00000513228 ALDH1A1P00352 501 aa5.14□□□□□ -1.59
SMN1-208ENST00000513228 PTCRAQ6ISU1 281 aaPredicted RBP5.14□□□□□ -1.59
SMN1-208ENST00000513228 SNIP1Q8TAD8 396 aaKnown RBP5.14□□□□□ -1.59
SMN1-208ENST00000513228 BAP1Q92560 729 aa5.14□□□□□ -1.59
SMN1-208ENST00000513228 MRGPRX2Q96LB1 330 aa5.14□□□□□ -1.59
SMN1-208ENST00000513228 WASF2Q9Y6W5 498 aa5.14□□□□□ -1.59
SMN1-208ENST00000513228 WNT7AO00755 349 aa5.13□□□□□ -1.59
SMN1-208ENST00000513228 AP1G2O75843 785 aa5.13□□□□□ -1.59
SMN1-208ENST00000513228 VEGFBP49765 207 aa5.13□□□□□ -1.59
SMN1-208ENST00000513228 WNT7BP56706 349 aa5.13□□□□□ -1.59
SMN1-208ENST00000513228 ARID5BQ14865 1188 aa5.13□□□□□ -1.59
SMN1-208ENST00000513228 SKIV2LQ15477 1246 aaKnown RBP5.13□□□□□ -1.59
SMN1-208ENST00000513228 RTL5Q5HYW3 569 aaPredicted RBP5.13□□□□□ -1.59
SMN1-208ENST00000513228 DESI1Q6ICB0 168 aa5.13□□□□□ -1.59
SMN1-208ENST00000513228 LYPD8Q6UX82 237 aa5.13□□□□□ -1.59
SMN1-208ENST00000513228 PROCA1Q8NCQ7 364 aaPredicted RBP5.13□□□□□ -1.59
SMN1-208ENST00000513228 PCMTD1Q96MG8 357 aaPredicted RBP5.13□□□□□ -1.59
SMN1-208ENST00000513228 EVA1BQ9NVM1 165 aa5.13□□□□□ -1.59
SMN1-208ENST00000513228 MAP10Q9P2G4 905 aa5.13□□□□□ -1.59
SMN1-208ENST00000513228 FOXK2Q01167 660 aa5.12□□□□□ -1.59
SMN1-208ENST00000513228 LILRB3O75022 631 aa5.11□□□□□ -1.59
SMN1-208ENST00000513228 SKOR1P84550 965 aa5.11□□□□□ -1.59
SMN1-208ENST00000513228 SH3D19Q5HYK7 790 aa5.11□□□□□ -1.59
SMN1-208ENST00000513228 MAGEB6P1A0A0J9YX57 407 aa5.1□□□□□ -1.59
SMN1-208ENST00000513228 J3QL48 77 aa5.1□□□□□ -1.59
SMN1-208ENST00000513228 PER1O15534 1290 aaPredicted RBP5.1□□□□□ -1.59
SMN1-208ENST00000513228 SH3BP2P78314 561 aa5.1□□□□□ -1.59
SMN1-208ENST00000513228 ZNF511Q8NB15 262 aa5.1□□□□□ -1.59
SMN1-208ENST00000513228 ARMC2Q8NEN0 867 aa5.1□□□□□ -1.59
SMN1-208ENST00000513228 PLEKHG3A1L390 1219 aa5.09□□□□□ -1.59
SMN1-208ENST00000513228 CTDSPL2Q05D32 466 aa5.09□□□□□ -1.59
SMN1-208ENST00000513228 CARD14Q9BXL6 1004 aa5.09□□□□□ -1.59
SMN1-208ENST00000513228 PRKCSHP14314 528 aaPredicted RBP5.08□□□□□ -1.6
SMN1-208ENST00000513228 BRPF1P55201 1214 aaPredicted RBP5.08□□□□□ -1.6
SMN1-208ENST00000513228 TUSC1Q2TAM9 212 aa5.08□□□□□ -1.6
SMN1-208ENST00000513228 NBPF14Q5TI25 921 aa5.08□□□□□ -1.6
SMN1-208ENST00000513228 BPHLQ86WA6 291 aaPredicted RBP5.08□□□□□ -1.6
SMN1-208ENST00000513228 PNMA1Q8ND90 353 aa5.08□□□□□ -1.6
SMN1-208ENST00000513228 FAM174AQ8TBP5 190 aa5.08□□□□□ -1.6
SMN1-208ENST00000513228 FOXJ1Q92949 421 aa5.08□□□□□ -1.6
SMN1-208ENST00000513228 SMPD1P17405 629 aa5.07□□□□□ -1.6
SMN1-208ENST00000513228 VARSP26640 1264 aaKnown RBP5.07□□□□□ -1.6
SMN1-208ENST00000513228 LRRN4Q8WUT4 740 aa5.07□□□□□ -1.6
SMN1-208ENST00000513228 HPS1Q92902 700 aa5.07□□□□□ -1.6
SMN1-208ENST00000513228 TLL2Q9Y6L7 1015 aa5.07□□□□□ -1.6
SMN1-208ENST00000513228 F12P00748 615 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms