RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 NRKQ7Z2Y5 1582 aa17.19■□□□□ 0.34
PDPN-210ENST00000513143 FOXO3O43524 673 aa17.19■□□□□ 0.34
PDPN-210ENST00000513143 SSH2Q76I76 1423 aa17.19■□□□□ 0.34
PDPN-210ENST00000513143 BRD4O60885 1362 aaPredicted RBP17.18■□□□□ 0.34
PDPN-210ENST00000513143 ROBO1Q9Y6N7 1651 aa17.18■□□□□ 0.34
PDPN-210ENST00000513143 PSME1Q06323 249 aa17.17■□□□□ 0.34
PDPN-210ENST00000513143 NHSL1Q5SYE7 1610 aa17.16■□□□□ 0.34
PDPN-210ENST00000513143 NPC1L1Q9UHC9 1359 aa17.16■□□□□ 0.34
PDPN-210ENST00000513143 NPHP3Q7Z494 1330 aa17.16■□□□□ 0.34
PDPN-210ENST00000513143 UBAP1LF5GYI3 381 aa17.16■□□□□ 0.34
PDPN-210ENST00000513143 AMER1Q5JTC6 1135 aaPredicted RBP17.16■□□□□ 0.34
PDPN-210ENST00000513143 KIF20BQ96Q89 1820 aa17.15■□□□□ 0.34
PDPN-210ENST00000513143 CGNL1Q0VF96 1302 aa17.15■□□□□ 0.34
PDPN-210ENST00000513143 TTC21BQ7Z4L5 1316 aa17.15■□□□□ 0.34
PDPN-210ENST00000513143 TRPM3Q9HCF6 1732 aaPredicted RBP17.15■□□□□ 0.34
PDPN-210ENST00000513143 KRT28Q7Z3Y7 464 aa17.14■□□□□ 0.33
PDPN-210ENST00000513143 PXDNQ92626 1479 aa17.13■□□□□ 0.33
PDPN-210ENST00000513143 TTC21AQ8NDW8 1320 aa17.13■□□□□ 0.33
PDPN-210ENST00000513143 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.13■□□□□ 0.33
PDPN-210ENST00000513143 DDX17Q92841 729 aaKnown RBP17.13■□□□□ 0.33
PDPN-210ENST00000513143 ANKRD26Q9UPS8 1709 aa17.12■□□□□ 0.33
PDPN-210ENST00000513143 FYB1O15117 783 aa17.12■□□□□ 0.33
PDPN-210ENST00000513143 AHDC1Q5TGY3 1603 aaPredicted RBP17.12■□□□□ 0.33
PDPN-210ENST00000513143 NSD2O96028 1365 aa17.11■□□□□ 0.33
PDPN-210ENST00000513143 SOS2Q07890 1332 aaPredicted RBP17.11■□□□□ 0.33
PDPN-210ENST00000513143 XPCQ01831 940 aaPredicted RBP17.11■□□□□ 0.33
PDPN-210ENST00000513143 SBNO1A3KN83 1393 aa17.11■□□□□ 0.33
PDPN-210ENST00000513143 PIK3C2AO00443 1686 aa17.1■□□□□ 0.33
PDPN-210ENST00000513143 PIP4K2BP78356 416 aa17.1■□□□□ 0.33
PDPN-210ENST00000513143 CC2D1BQ5T0F9 858 aaKnown RBP17.1■□□□□ 0.33
PDPN-210ENST00000513143 ALS2Q96Q42 1657 aa17.1■□□□□ 0.33
PDPN-210ENST00000513143 PAK3O75914 559 aaPredicted RBP17.09■□□□□ 0.33
PDPN-210ENST00000513143 NME9Q86XW9 330 aa17.09■□□□□ 0.33
PDPN-210ENST00000513143 USP54Q70EL1 1684 aa17.09■□□□□ 0.33
PDPN-210ENST00000513143 ANP32CO43423 234 aa17.08■□□□□ 0.32
PDPN-210ENST00000513143 GGNBP2Q9H3C7 697 aa17.08■□□□□ 0.32
PDPN-210ENST00000513143 USP31Q70CQ4 1352 aa17.08■□□□□ 0.32
PDPN-210ENST00000513143 PRKRIP1Q9H875 184 aaPredicted RBP17.07■□□□□ 0.32
PDPN-210ENST00000513143 PARD3Q8TEW0 1356 aa17.07■□□□□ 0.32
PDPN-210ENST00000513143 SPATA31A3Q5VYP0 1347 aa17.07■□□□□ 0.32
PDPN-210ENST00000513143 TNS3Q68CZ2 1445 aa17.06■□□□□ 0.32
PDPN-210ENST00000513143 PHLPP1O60346 1717 aa17.06■□□□□ 0.32
PDPN-210ENST00000513143 MARF1Q9Y4F3 1742 aaKnown RBP17.06■□□□□ 0.32
PDPN-210ENST00000513143 CNGB1Q14028 1251 aaPredicted RBP17.06■□□□□ 0.32
PDPN-210ENST00000513143 ABTB2Q8N961 1025 aa17.06■□□□□ 0.32
PDPN-210ENST00000513143 ZRANB1Q9UGI0 708 aa17.06■□□□□ 0.32
PDPN-210ENST00000513143 OVOS2A0A0J9YW53 1432 aa17.06■□□□□ 0.32
PDPN-210ENST00000513143 OVOS2Q6IE36 1432 aa17.06■□□□□ 0.32
PDPN-210ENST00000513143 RALBP1Q15311 655 aa17.05■□□□□ 0.32
PDPN-210ENST00000513143 MORC1Q86VD1 984 aa17.04■□□□□ 0.32
PDPN-210ENST00000513143 COG3Q96JB2 828 aa17.04■□□□□ 0.32
PDPN-210ENST00000513143 COL16A1Q07092 1604 aaPredicted RBP17.04■□□□□ 0.32
PDPN-210ENST00000513143 NLRP6P59044 892 aa17.03■□□□□ 0.32
PDPN-210ENST00000513143 ARHGEF10O15013 1369 aa17.02■□□□□ 0.32
PDPN-210ENST00000513143 NLRP13Q86W25 1043 aa17.02■□□□□ 0.32
PDPN-210ENST00000513143 LRRC59Q96AG4 307 aaKnown RBP17.02■□□□□ 0.32
PDPN-210ENST00000513143 NUTM2GQ5VZR2 741 aa17.01■□□□□ 0.31
PDPN-210ENST00000513143 LMOD2Q6P5Q4 547 aa17.01■□□□□ 0.31
PDPN-210ENST00000513143 MAP2P11137 1827 aaKnown RBP17■□□□□ 0.31
PDPN-210ENST00000513143 MED1Q15648 1581 aaPredicted RBP17■□□□□ 0.31
PDPN-210ENST00000513143 MIER1Q8N108 512 aa16.99■□□□□ 0.31
PDPN-210ENST00000513143 CRYBG1Q9Y4K1 1723 aa16.99■□□□□ 0.31
PDPN-210ENST00000513143 USP19O94966 1318 aa16.99■□□□□ 0.31
PDPN-210ENST00000513143 SLIT3O75094 1523 aa16.98■□□□□ 0.31
PDPN-210ENST00000513143 MYBBP1AQ9BQG0 1328 aaKnown RBP16.98■□□□□ 0.31
PDPN-210ENST00000513143 AATKQ6ZMQ8 1374 aa16.98■□□□□ 0.31
PDPN-210ENST00000513143 PPP2R1AP30153 589 aa16.97■□□□□ 0.31
PDPN-210ENST00000513143 TNNT2P45379 298 aaPredicted RBP16.97■□□□□ 0.31
PDPN-210ENST00000513143 COL22A1Q8NFW1 1626 aaPredicted RBP16.97■□□□□ 0.31
PDPN-210ENST00000513143 PHRF1Q9P1Y6 1649 aaKnown RBP16.97■□□□□ 0.31
PDPN-210ENST00000513143 C1QBPQ07021 282 aaKnown RBP16.96■□□□□ 0.31
PDPN-210ENST00000513143 KCNH5Q8NCM2 988 aa16.96■□□□□ 0.31
PDPN-210ENST00000513143 GCP02774 474 aa16.96■□□□□ 0.3
PDPN-210ENST00000513143 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.3
PDPN-210ENST00000513143 PNPLA6Q8IY17 1366 aa16.95■□□□□ 0.3
PDPN-210ENST00000513143 NFAT5O94916 1531 aa16.95■□□□□ 0.3
PDPN-210ENST00000513143 ABCA3Q99758 1704 aa16.95■□□□□ 0.3
PDPN-210ENST00000513143 FBLN1P23142 703 aa16.94■□□□□ 0.3
PDPN-210ENST00000513143 POLKQ9UBT6 870 aa16.94■□□□□ 0.3
PDPN-210ENST00000513143 SHPRHQ149N8 1683 aa16.93■□□□□ 0.3
PDPN-210ENST00000513143 HSPA1LP34931 641 aa16.93■□□□□ 0.3
PDPN-210ENST00000513143 CABLES1Q8TDN4 633 aa16.93■□□□□ 0.3
PDPN-210ENST00000513143 LTN1O94822 1766 aa16.92■□□□□ 0.3
PDPN-210ENST00000513143 SMG6Q86US8 1419 aaKnown RBP16.92■□□□□ 0.3
PDPN-210ENST00000513143 CCER2I3L3R5 266 aa16.92■□□□□ 0.3
PDPN-210ENST00000513143 SOX12O15370 315 aa16.92■□□□□ 0.3
PDPN-210ENST00000513143 MTHFSP49914 203 aa16.92■□□□□ 0.3
PDPN-210ENST00000513143 PLEKHG5O94827 1062 aa16.91■□□□□ 0.3
PDPN-210ENST00000513143 RRS1Q15050 365 aaKnown RBP16.91■□□□□ 0.3
PDPN-210ENST00000513143 JCADQ9P266 1359 aa16.9■□□□□ 0.3
PDPN-210ENST00000513143 MAP3K19Q56UN5 1328 aa16.9■□□□□ 0.3
PDPN-210ENST00000513143 FBXO41Q8TF61 875 aa16.9■□□□□ 0.3
PDPN-210ENST00000513143 EMILIN1Q9Y6C2 1016 aa16.9■□□□□ 0.3
PDPN-210ENST00000513143 PEAK1Q9H792 1746 aa16.89■□□□□ 0.29
PDPN-210ENST00000513143 KIF24Q5T7B8 1368 aa16.89■□□□□ 0.29
PDPN-210ENST00000513143 CCDC184Q52MB2 194 aa16.89■□□□□ 0.29
PDPN-210ENST00000513143 ARHGEF25Q86VW2 580 aa16.89■□□□□ 0.29
PDPN-210ENST00000513143 CDK12Q9NYV4 1490 aaPredicted RBP16.88■□□□□ 0.29
PDPN-210ENST00000513143 CPDO75976 1380 aa16.87■□□□□ 0.29
PDPN-210ENST00000513143 INSRP06213 1382 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms