RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 CENPQQ7L2Z9 268 aaPredicted RBP5.14□□□□□ -1.59
VCAN-209ENST00000513016 EHBP1L1Q8N3D4 1523 aa5.14□□□□□ -1.59
VCAN-209ENST00000513016 CCDC7Q96M83 1385 aa5.14□□□□□ -1.59
VCAN-209ENST00000513016 MPHOSPH10O00566 681 aaKnown RBP5.14□□□□□ -1.59
VCAN-209ENST00000513016 IPO7O95373 1038 aaKnown RBP5.14□□□□□ -1.59
VCAN-209ENST00000513016 MCTP1Q6DN14 999 aa5.14□□□□□ -1.59
VCAN-209ENST00000513016 C16orf71Q8IYS4 520 aaPredicted RBP5.14□□□□□ -1.59
VCAN-209ENST00000513016 AK7Q96M32 723 aa5.14□□□□□ -1.59
VCAN-209ENST00000513016 CABP1Q9NZU7 370 aa5.14□□□□□ -1.59
VCAN-209ENST00000513016 PSMA5P28066 241 aa5.13□□□□□ -1.59
VCAN-209ENST00000513016 POLD1P28340 1107 aa5.13□□□□□ -1.59
VCAN-209ENST00000513016 ZSCAN29Q8IWY8 852 aaPredicted RBP5.13□□□□□ -1.59
VCAN-209ENST00000513016 NUDT16Q96DE0 195 aaKnown RBP5.13□□□□□ -1.59
VCAN-209ENST00000513016 HECW1Q76N89 1606 aa5.13□□□□□ -1.59
VCAN-209ENST00000513016 HDGFL1Q5TGJ6 251 aa5.13□□□□□ -1.59
VCAN-209ENST00000513016 SLF2Q8IX21 1173 aa5.13□□□□□ -1.59
VCAN-209ENST00000513016 DNAI2Q9GZS0 605 aa5.13□□□□□ -1.59
VCAN-209ENST00000513016 ZNF287Q9HBT7 754 aa5.13□□□□□ -1.59
VCAN-209ENST00000513016 ERBINQ96RT1 1412 aa5.13□□□□□ -1.59
VCAN-209ENST00000513016 CNTROBQ8N137 903 aa5.13□□□□□ -1.59
VCAN-209ENST00000513016 DNAJC5BQ9UF47 199 aa5.13□□□□□ -1.59
VCAN-209ENST00000513016 LRRC9Q6ZRR7 1453 aa5.13□□□□□ -1.59
VCAN-209ENST00000513016 KRT28Q7Z3Y7 464 aa5.13□□□□□ -1.59
VCAN-209ENST00000513016 ERICH3Q5RHP9 1530 aa5.13□□□□□ -1.59
VCAN-209ENST00000513016 AMOTL2Q9Y2J4 779 aa5.13□□□□□ -1.59
VCAN-209ENST00000513016 PCMTD1Q96MG8 357 aaPredicted RBP5.13□□□□□ -1.59
VCAN-209ENST00000513016 NOP58Q9Y2X3 529 aaKnown RBP5.13□□□□□ -1.59
VCAN-209ENST00000513016 INTS3Q68E01 1043 aaKnown RBP5.13□□□□□ -1.59
VCAN-209ENST00000513016 SULT6B1Q6IMI4 303 aa5.13□□□□□ -1.59
VCAN-209ENST00000513016 ADGRL1O94910 1474 aa5.13□□□□□ -1.59
VCAN-209ENST00000513016 NOL8Q76FK4 1167 aaKnown RBP5.12□□□□□ -1.59
VCAN-209ENST00000513016 SPRYD3Q8NCJ5 442 aa5.12□□□□□ -1.59
VCAN-209ENST00000513016 GOLGA6L19H0YKK7 550 aa5.12□□□□□ -1.59
VCAN-209ENST00000513016 PRKAR2BP31323 418 aa5.12□□□□□ -1.59
VCAN-209ENST00000513016 CCT4P50991 539 aaKnown RBP5.12□□□□□ -1.59
VCAN-209ENST00000513016 ODF2Q5BJF6 829 aa5.12□□□□□ -1.59
VCAN-209ENST00000513016 CCDC70Q6NSX1 233 aa5.12□□□□□ -1.59
VCAN-209ENST00000513016 TTLL12Q14166 644 aaPredicted RBP5.12□□□□□ -1.59
VCAN-209ENST00000513016 SMARCC1Q92922 1105 aaPredicted RBP5.12□□□□□ -1.59
VCAN-209ENST00000513016 CEP126Q9P2H0 1117 aa5.12□□□□□ -1.59
VCAN-209ENST00000513016 CNTLNQ9NXG0 1405 aa5.12□□□□□ -1.59
VCAN-209ENST00000513016 SLC4A3P48751 1232 aa5.12□□□□□ -1.59
VCAN-209ENST00000513016 RPGRQ92834 1020 aaKnown RBP5.12□□□□□ -1.59
VCAN-209ENST00000513016 RUSC2Q8N2Y8 1516 aa5.12□□□□□ -1.59
VCAN-209ENST00000513016 RDXP35241 583 aaKnown RBP5.12□□□□□ -1.59
VCAN-209ENST00000513016 SOGA3Q5TF21 947 aa5.12□□□□□ -1.59
VCAN-209ENST00000513016 FSD1Q9BTV5 496 aa5.12□□□□□ -1.59
VCAN-209ENST00000513016 TNRQ92752 1358 aa5.12□□□□□ -1.59
VCAN-209ENST00000513016 BECN2A8MW95 431 aa5.12□□□□□ -1.59
VCAN-209ENST00000513016 BCL2L13Q9BXK5 485 aa5.12□□□□□ -1.59
VCAN-209ENST00000513016 BTBD11A6QL63 1104 aa5.11□□□□□ -1.59
VCAN-209ENST00000513016 ATP2B2Q01814 1243 aa5.11□□□□□ -1.59
VCAN-209ENST00000513016 PDE4CQ08493 712 aa5.11□□□□□ -1.59
VCAN-209ENST00000513016 FAM135AQ9P2D6 1515 aa5.11□□□□□ -1.59
VCAN-209ENST00000513016 KIAA1107Q9UPP5 1409 aa5.11□□□□□ -1.59
VCAN-209ENST00000513016 TRIM21P19474 475 aaKnown RBP5.11□□□□□ -1.59
VCAN-209ENST00000513016 ATF7IPQ6VMQ6 1270 aa5.11□□□□□ -1.59
VCAN-209ENST00000513016 NPHP3Q7Z494 1330 aa5.11□□□□□ -1.59
VCAN-209ENST00000513016 SURF6O75683 361 aaKnown RBP5.11□□□□□ -1.59
VCAN-209ENST00000513016 TXLNAP40222 546 aa5.11□□□□□ -1.59
VCAN-209ENST00000513016 PAF1Q8N7H5 531 aa5.11□□□□□ -1.59
VCAN-209ENST00000513016 GOLGA6L1Q8N7Z2 621 aa5.11□□□□□ -1.59
VCAN-209ENST00000513016 SRCIN1Q9C0H9 1055 aa5.11□□□□□ -1.59
VCAN-209ENST00000513016 GNAI2P04899 355 aa5.11□□□□□ -1.59
VCAN-209ENST00000513016 CAVIN4Q5BKX8 364 aa5.11□□□□□ -1.59
VCAN-209ENST00000513016 BICDL1Q6ZP65 573 aa5.11□□□□□ -1.59
VCAN-209ENST00000513016 CDK5RAP3Q96JB5 506 aa5.11□□□□□ -1.59
VCAN-209ENST00000513016 CT47A1Q5JQC4 288 aaPredicted RBP5.11□□□□□ -1.59
VCAN-209ENST00000513016 PRKRIP1Q9H875 184 aaPredicted RBP5.11□□□□□ -1.59
VCAN-209ENST00000513016 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.11□□□□□ -1.59
VCAN-209ENST00000513016 CCDC141Q6ZP82 1450 aa5.11□□□□□ -1.59
VCAN-209ENST00000513016 IFIT1P09914 478 aaKnown RBP5.1□□□□□ -1.59
VCAN-209ENST00000513016 CT47B1P0C2W7 299 aaPredicted RBP5.1□□□□□ -1.59
VCAN-209ENST00000513016 XPCQ01831 940 aaPredicted RBP5.1□□□□□ -1.59
VCAN-209ENST00000513016 TWISTNBQ3B726 338 aaPredicted RBP5.1□□□□□ -1.59
VCAN-209ENST00000513016 AKAP2Q9Y2D5 859 aa5.1□□□□□ -1.59
VCAN-209ENST00000513016 GNAT3A8MTJ3 354 aa5.1□□□□□ -1.59
VCAN-209ENST00000513016 ST5P78524 1137 aa5.1□□□□□ -1.59
VCAN-209ENST00000513016 EPS15P42566 896 aa5.1□□□□□ -1.59
VCAN-209ENST00000513016 SMC3Q9UQE7 1217 aa5.1□□□□□ -1.59
VCAN-209ENST00000513016 GRIN2AQ12879 1464 aa5.1□□□□□ -1.59
VCAN-209ENST00000513016 TNIP1Q15025 636 aa5.1□□□□□ -1.59
VCAN-209ENST00000513016 COG6Q9Y2V7 657 aa5.1□□□□□ -1.59
VCAN-209ENST00000513016 MPHOSPH6Q99547 160 aaKnown RBP5.1□□□□□ -1.59
VCAN-209ENST00000513016 CTNNA3Q9UI47 895 aa5.1□□□□□ -1.59
VCAN-209ENST00000513016 ABCA10Q8WWZ4 1543 aa5.1□□□□□ -1.59
VCAN-209ENST00000513016 LDHCP07864 332 aa5.09□□□□□ -1.59
VCAN-209ENST00000513016 RFC4P35249 363 aa5.09□□□□□ -1.59
VCAN-209ENST00000513016 C11orf95C9JLR9 678 aaPredicted RBP5.09□□□□□ -1.59
VCAN-209ENST00000513016 DNAJC2Q99543 621 aaKnown RBP5.09□□□□□ -1.59
VCAN-209ENST00000513016 MTMR7Q9Y216 660 aa5.09□□□□□ -1.59
VCAN-209ENST00000513016 MYO1BO43795 1136 aa5.09□□□□□ -1.59
VCAN-209ENST00000513016 CRACR2BQ8N4Y2 399 aaPredicted RBP5.09□□□□□ -1.59
VCAN-209ENST00000513016 ZNF428Q96B54 188 aa5.09□□□□□ -1.59
VCAN-209ENST00000513016 RAI14Q9P0K7 980 aa5.09□□□□□ -1.59
VCAN-209ENST00000513016 FOXO3O43524 673 aa5.09□□□□□ -1.59
VCAN-209ENST00000513016 CEBPAP49715 358 aaPredicted RBP5.09□□□□□ -1.59
VCAN-209ENST00000513016 LARP1Q6PKG0 1096 aaKnown RBP5.09□□□□□ -1.59
VCAN-209ENST00000513016 LRRC59Q96AG4 307 aaKnown RBP5.09□□□□□ -1.59
VCAN-209ENST00000513016 FCHSD2O94868 740 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms