RNA–Protein interactions for RNA: ENST00000512966.1

SH3TC1-222, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-222ENST00000512966 CCDC184Q52MB2 194 aa23.11■■□□□ 1.29
SH3TC1-222ENST00000512966 GGNBP2Q9H3C7 697 aa23.11■■□□□ 1.29
SH3TC1-222ENST00000512966 XIRP1Q702N8 1843 aaKnown RBP23.1■■□□□ 1.29
SH3TC1-222ENST00000512966 ORAI2Q96SN7 254 aa23.1■■□□□ 1.29
SH3TC1-222ENST00000512966 LTBP4Q8N2S1 1624 aa23.08■■□□□ 1.29
SH3TC1-222ENST00000512966 NRKQ7Z2Y5 1582 aa23.08■■□□□ 1.29
SH3TC1-222ENST00000512966 SCAF1Q9H7N4 1312 aaKnown RBP23.08■■□□□ 1.28
SH3TC1-222ENST00000512966 NME9Q86XW9 330 aa23.07■■□□□ 1.28
SH3TC1-222ENST00000512966 PSME1Q06323 249 aa23.05■■□□□ 1.28
SH3TC1-222ENST00000512966 COG3Q96JB2 828 aa23.05■■□□□ 1.28
SH3TC1-222ENST00000512966 KIF1AQ12756 1690 aa23.05■■□□□ 1.28
SH3TC1-222ENST00000512966 USP31Q70CQ4 1352 aa23.04■■□□□ 1.28
SH3TC1-222ENST00000512966 KIF20BQ96Q89 1820 aa23.04■■□□□ 1.28
SH3TC1-222ENST00000512966 ANKRD26Q9UPS8 1709 aa23.04■■□□□ 1.28
SH3TC1-222ENST00000512966 SLAIN2Q9P270 581 aa23.03■■□□□ 1.28
SH3TC1-222ENST00000512966 FOXO3O43524 673 aa23.02■■□□□ 1.28
SH3TC1-222ENST00000512966 PNISRQ8TF01 805 aaKnown RBP23.02■■□□□ 1.28
SH3TC1-222ENST00000512966 OVOS2A0A0J9YW53 1432 aa23■■□□□ 1.27
SH3TC1-222ENST00000512966 OVOS2Q6IE36 1432 aa23■■□□□ 1.27
SH3TC1-222ENST00000512966 TNNT2P45379 298 aaPredicted RBP23■■□□□ 1.27
SH3TC1-222ENST00000512966 AATKQ6ZMQ8 1374 aa23■■□□□ 1.27
SH3TC1-222ENST00000512966 ZRANB1Q9UGI0 708 aa22.99■■□□□ 1.27
SH3TC1-222ENST00000512966 KRT28Q7Z3Y7 464 aa22.98■■□□□ 1.27
SH3TC1-222ENST00000512966 NPHP3Q7Z494 1330 aa22.98■■□□□ 1.27
SH3TC1-222ENST00000512966 MTHFSP49914 203 aa22.97■■□□□ 1.27
SH3TC1-222ENST00000512966 BRINP3Q76B58 766 aa22.97■■□□□ 1.27
SH3TC1-222ENST00000512966 PAK3O75914 559 aaPredicted RBP22.96■■□□□ 1.27
SH3TC1-222ENST00000512966 ABTB2Q8N961 1025 aa22.96■■□□□ 1.27
SH3TC1-222ENST00000512966 FAM9BQ8IZU0 186 aa22.95■■□□□ 1.26
SH3TC1-222ENST00000512966 CFAP53Q96M91 514 aa22.95■■□□□ 1.26
SH3TC1-222ENST00000512966 SBNO1A3KN83 1393 aa22.94■■□□□ 1.26
SH3TC1-222ENST00000512966 NLRP6P59044 892 aa22.94■■□□□ 1.26
SH3TC1-222ENST00000512966 INSRP06213 1382 aa22.93■■□□□ 1.26
SH3TC1-222ENST00000512966 POLKQ9UBT6 870 aa22.92■■□□□ 1.26
SH3TC1-222ENST00000512966 PIK3C2AO00443 1686 aa22.92■■□□□ 1.26
SH3TC1-222ENST00000512966 USP54Q70EL1 1684 aa22.91■■□□□ 1.26
SH3TC1-222ENST00000512966 SMG6Q86US8 1419 aaKnown RBP22.91■■□□□ 1.26
SH3TC1-222ENST00000512966 PNPLA6Q8IY17 1366 aa22.9■■□□□ 1.26
SH3TC1-222ENST00000512966 XPCQ01831 940 aaPredicted RBP22.9■■□□□ 1.26
SH3TC1-222ENST00000512966 YTHDC1Q96MU7 727 aaKnown RBP22.9■■□□□ 1.26
SH3TC1-222ENST00000512966 TRPM3Q9HCF6 1732 aaPredicted RBP22.89■■□□□ 1.26
SH3TC1-222ENST00000512966 PXDNQ92626 1479 aa22.88■■□□□ 1.25
SH3TC1-222ENST00000512966 SOS2Q07890 1332 aaPredicted RBP22.87■■□□□ 1.25
SH3TC1-222ENST00000512966 WDR43Q15061 677 aaKnown RBP eCLIP22.87■■□□□ 1.25
SH3TC1-222ENST00000512966 IQSEC2Q5JU85 1478 aa22.86■■□□□ 1.25
SH3TC1-222ENST00000512966 FBLN1P23142 703 aa22.86■■□□□ 1.25
SH3TC1-222ENST00000512966 KCNH5Q8NCM2 988 aa22.86■■□□□ 1.25
SH3TC1-222ENST00000512966 NUTM2GQ5VZR2 741 aa22.85■■□□□ 1.25
SH3TC1-222ENST00000512966 DDX17Q92841 729 aaKnown RBP22.85■■□□□ 1.25
SH3TC1-222ENST00000512966 USP19O94966 1318 aa22.84■■□□□ 1.25
SH3TC1-222ENST00000512966 SPATA31A3Q5VYP0 1347 aa22.84■■□□□ 1.25
SH3TC1-222ENST00000512966 TNS3Q68CZ2 1445 aa22.84■■□□□ 1.25
SH3TC1-222ENST00000512966 EMILIN1Q9Y6C2 1016 aa22.84■■□□□ 1.25
SH3TC1-222ENST00000512966 CDK12Q9NYV4 1490 aaPredicted RBP22.84■■□□□ 1.25
SH3TC1-222ENST00000512966 TOM1O60784 492 aa22.83■■□□□ 1.25
SH3TC1-222ENST00000512966 RRS1Q15050 365 aaKnown RBP22.83■■□□□ 1.25
SH3TC1-222ENST00000512966 ADAMTS8Q9UP79 889 aa22.83■■□□□ 1.25
SH3TC1-222ENST00000512966 NUDCQ9Y266 331 aa22.83■■□□□ 1.25
SH3TC1-222ENST00000512966 ARHGEF10O15013 1369 aa22.83■■□□□ 1.25
SH3TC1-222ENST00000512966 KIF24Q5T7B8 1368 aa22.83■■□□□ 1.25
SH3TC1-222ENST00000512966 COL3A1P02461 1466 aaPredicted RBP22.83■■□□□ 1.25
SH3TC1-222ENST00000512966 DIAPH1O60610 1272 aaKnown RBP22.81■■□□□ 1.24
SH3TC1-222ENST00000512966 LMOD2Q6P5Q4 547 aa22.81■■□□□ 1.24
SH3TC1-222ENST00000512966 MARF1Q9Y4F3 1742 aaKnown RBP22.81■■□□□ 1.24
SH3TC1-222ENST00000512966 ALS2Q96Q42 1657 aa22.81■■□□□ 1.24
SH3TC1-222ENST00000512966 PPM1GO15355 546 aaPredicted RBP22.8■■□□□ 1.24
SH3TC1-222ENST00000512966 SLIT3O75094 1523 aa22.8■■□□□ 1.24
SH3TC1-222ENST00000512966 MAP3K19Q56UN5 1328 aa22.8■■□□□ 1.24
SH3TC1-222ENST00000512966 NHSL1Q5SYE7 1610 aa22.79■■□□□ 1.24
SH3TC1-222ENST00000512966 MAP2P11137 1827 aaKnown RBP22.78■■□□□ 1.24
SH3TC1-222ENST00000512966 GCP02774 474 aa22.78■■□□□ 1.24
SH3TC1-222ENST00000512966 BLMP54132 1417 aaPredicted RBP22.78■■□□□ 1.24
SH3TC1-222ENST00000512966 HNRNPUQ00839 825 aaKnown RBP eCLIP22.78■■□□□ 1.24
SH3TC1-222ENST00000512966 SOX12O15370 315 aa22.77■■□□□ 1.24
SH3TC1-222ENST00000512966 FLT4P35916 1363 aa22.76■■□□□ 1.23
SH3TC1-222ENST00000512966 CERKQ8TCT0 537 aa22.76■■□□□ 1.23
SH3TC1-222ENST00000512966 NFAT5O94916 1531 aa22.76■■□□□ 1.23
SH3TC1-222ENST00000512966 RTL1A6NKG5 1358 aa22.76■■□□□ 1.23
SH3TC1-222ENST00000512966 SHPRHQ149N8 1683 aa22.75■■□□□ 1.23
SH3TC1-222ENST00000512966 IL13P35225 146 aa22.75■■□□□ 1.23
SH3TC1-222ENST00000512966 AMPHP49418 695 aa22.75■■□□□ 1.23
SH3TC1-222ENST00000512966 AHDC1Q5TGY3 1603 aaPredicted RBP22.75■■□□□ 1.23
SH3TC1-222ENST00000512966 CENPBP07199 599 aaPredicted RBP22.74■■□□□ 1.23
SH3TC1-222ENST00000512966 ROBO1Q9Y6N7 1651 aa22.74■■□□□ 1.23
SH3TC1-222ENST00000512966 MED1Q15648 1581 aaPredicted RBP22.73■■□□□ 1.23
SH3TC1-222ENST00000512966 ARHGEF25Q86VW2 580 aa22.73■■□□□ 1.23
SH3TC1-222ENST00000512966 U2AF1L5P0DN76 240 aaPredicted RBP22.72■■□□□ 1.23
SH3TC1-222ENST00000512966 U2AF1Q01081 240 aaKnown RBP eCLIP22.72■■□□□ 1.23
SH3TC1-222ENST00000512966 LRRC59Q96AG4 307 aaKnown RBP22.72■■□□□ 1.23
SH3TC1-222ENST00000512966 UBAP1LF5GYI3 381 aa22.71■■□□□ 1.23
SH3TC1-222ENST00000512966 U2SURPO15042 1029 aaKnown RBP22.71■■□□□ 1.23
SH3TC1-222ENST00000512966 HOXC9P31274 260 aa22.71■■□□□ 1.23
SH3TC1-222ENST00000512966 HSP90AB2PQ58FF8 381 aa22.71■■□□□ 1.23
SH3TC1-222ENST00000512966 IP6K1Q92551 441 aa22.71■■□□□ 1.23
SH3TC1-222ENST00000512966 PNNQ9H307 717 aaKnown RBP22.71■■□□□ 1.23
SH3TC1-222ENST00000512966 ZBED9Q6R2W3 1325 aa22.71■■□□□ 1.23
SH3TC1-222ENST00000512966 PEAK1Q9H792 1746 aa22.71■■□□□ 1.23
SH3TC1-222ENST00000512966 EIF4A2Q14240 407 aaKnown RBP22.7■■□□□ 1.22
SH3TC1-222ENST00000512966 FCHSD2O94868 740 aa22.68■■□□□ 1.22
SH3TC1-222ENST00000512966 RUNDC1Q96C34 613 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms