RNA–Protein interactions for RNA: ENST00000512901.6

LINC01550-203, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 2,192 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-203ENST00000512901 FYB1O15117 783 aa14.19□□□□□ -0.14
LINC01550-203ENST00000512901 FOXO3O43524 673 aa14.19□□□□□ -0.14
LINC01550-203ENST00000512901 MYBBP1AQ9BQG0 1328 aaKnown RBP14.19□□□□□ -0.14
LINC01550-203ENST00000512901 ANKRD26Q9UPS8 1709 aa14.18□□□□□ -0.14
LINC01550-203ENST00000512901 CCER2I3L3R5 266 aa14.18□□□□□ -0.14
LINC01550-203ENST00000512901 PAK3O75914 559 aaPredicted RBP14.18□□□□□ -0.14
LINC01550-203ENST00000512901 NME9Q86XW9 330 aa14.18□□□□□ -0.14
LINC01550-203ENST00000512901 TTC21AQ8NDW8 1320 aa14.18□□□□□ -0.14
LINC01550-203ENST00000512901 BRD4O60885 1362 aaPredicted RBP14.17□□□□□ -0.14
LINC01550-203ENST00000512901 BRINP3Q76B58 766 aa14.16□□□□□ -0.14
LINC01550-203ENST00000512901 SSH2Q76I76 1423 aa14.16□□□□□ -0.14
LINC01550-203ENST00000512901 TNNT2P45379 298 aaPredicted RBP14.16□□□□□ -0.14
LINC01550-203ENST00000512901 XPCQ01831 940 aaPredicted RBP14.16□□□□□ -0.14
LINC01550-203ENST00000512901 KRT28Q7Z3Y7 464 aa14.16□□□□□ -0.14
LINC01550-203ENST00000512901 COG3Q96JB2 828 aa14.16□□□□□ -0.14
LINC01550-203ENST00000512901 NPHP3Q7Z494 1330 aa14.15□□□□□ -0.14
LINC01550-203ENST00000512901 PPP2R1AP30153 589 aa14.14□□□□□ -0.15
LINC01550-203ENST00000512901 NLRP13Q86W25 1043 aa14.14□□□□□ -0.15
LINC01550-203ENST00000512901 ZRANB1Q9UGI0 708 aa14.14□□□□□ -0.15
LINC01550-203ENST00000512901 ABTB2Q8N961 1025 aa14.13□□□□□ -0.15
LINC01550-203ENST00000512901 DDX17Q92841 729 aaKnown RBP14.13□□□□□ -0.15
LINC01550-203ENST00000512901 MRS2Q9HD23 443 aa14.13□□□□□ -0.15
LINC01550-203ENST00000512901 TOM1O60784 492 aa14.13□□□□□ -0.15
LINC01550-203ENST00000512901 PIK3C2AO00443 1686 aa14.12□□□□□ -0.15
LINC01550-203ENST00000512901 NLRP6P59044 892 aa14.12□□□□□ -0.15
LINC01550-203ENST00000512901 LMOD2Q6P5Q4 547 aa14.12□□□□□ -0.15
LINC01550-203ENST00000512901 IQSEC2Q5JU85 1478 aa14.11□□□□□ -0.15
LINC01550-203ENST00000512901 TRPM3Q9HCF6 1732 aaPredicted RBP14.11□□□□□ -0.15
LINC01550-203ENST00000512901 NUTM2GQ5VZR2 741 aa14.11□□□□□ -0.15
LINC01550-203ENST00000512901 CERKQ8TCT0 537 aa14.1□□□□□ -0.15
LINC01550-203ENST00000512901 OVOS2A0A0J9YW53 1432 aa14.1□□□□□ -0.15
LINC01550-203ENST00000512901 OVOS2Q6IE36 1432 aa14.1□□□□□ -0.15
LINC01550-203ENST00000512901 ROBO1Q9Y6N7 1651 aa14.1□□□□□ -0.15
LINC01550-203ENST00000512901 USP31Q70CQ4 1352 aa14.1□□□□□ -0.15
LINC01550-203ENST00000512901 CCDC184Q52MB2 194 aa14.1□□□□□ -0.15
LINC01550-203ENST00000512901 UBAP1LF5GYI3 381 aa14.09□□□□□ -0.15
LINC01550-203ENST00000512901 PXDNQ92626 1479 aa14.09□□□□□ -0.15
LINC01550-203ENST00000512901 SBNO1A3KN83 1393 aa14.09□□□□□ -0.15
LINC01550-203ENST00000512901 SCAF1Q9H7N4 1312 aaKnown RBP14.09□□□□□ -0.15
LINC01550-203ENST00000512901 NHSL1Q5SYE7 1610 aa14.08□□□□□ -0.15
LINC01550-203ENST00000512901 PIP4K2BP78356 416 aa14.08□□□□□ -0.16
LINC01550-203ENST00000512901 SOX12O15370 315 aa14.07□□□□□ -0.16
LINC01550-203ENST00000512901 TNS3Q68CZ2 1445 aa14.07□□□□□ -0.16
LINC01550-203ENST00000512901 USP54Q70EL1 1684 aa14.07□□□□□ -0.16
LINC01550-203ENST00000512901 ALS2Q96Q42 1657 aa14.07□□□□□ -0.16
LINC01550-203ENST00000512901 MAP2P11137 1827 aaKnown RBP14.07□□□□□ -0.16
LINC01550-203ENST00000512901 PLEKHG5O94827 1062 aa14.06□□□□□ -0.16
LINC01550-203ENST00000512901 MTHFSP49914 203 aa14.06□□□□□ -0.16
LINC01550-203ENST00000512901 SOS2Q07890 1332 aaPredicted RBP14.06□□□□□ -0.16
LINC01550-203ENST00000512901 CFAP53Q96M91 514 aa14.06□□□□□ -0.16
LINC01550-203ENST00000512901 SPATA31A3Q5VYP0 1347 aa14.06□□□□□ -0.16
LINC01550-203ENST00000512901 AATKQ6ZMQ8 1374 aa14.06□□□□□ -0.16
LINC01550-203ENST00000512901 MARF1Q9Y4F3 1742 aaKnown RBP14.06□□□□□ -0.16
LINC01550-203ENST00000512901 PPM1GO15355 546 aaPredicted RBP14.05□□□□□ -0.16
LINC01550-203ENST00000512901 FBLN1P23142 703 aa14.05□□□□□ -0.16
LINC01550-203ENST00000512901 ARHGEF10O15013 1369 aa14.05□□□□□ -0.16
LINC01550-203ENST00000512901 FAM9BQ8IZU0 186 aa14.05□□□□□ -0.16
LINC01550-203ENST00000512901 RRS1Q15050 365 aaKnown RBP14.04□□□□□ -0.16
LINC01550-203ENST00000512901 KCNH5Q8NCM2 988 aa14.03□□□□□ -0.16
LINC01550-203ENST00000512901 POLKQ9UBT6 870 aa14.03□□□□□ -0.16
LINC01550-203ENST00000512901 AHDC1Q5TGY3 1603 aaPredicted RBP14.03□□□□□ -0.16
LINC01550-203ENST00000512901 EMILIN1Q9Y6C2 1016 aa14.03□□□□□ -0.16
LINC01550-203ENST00000512901 PHLPP1O60346 1717 aa14.02□□□□□ -0.17
LINC01550-203ENST00000512901 USP19O94966 1318 aa14.01□□□□□ -0.17
LINC01550-203ENST00000512901 WDR43Q15061 677 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC01550-203ENST00000512901 PNISRQ8TF01 805 aaKnown RBP14.01□□□□□ -0.17
LINC01550-203ENST00000512901 YTHDC1Q96MU7 727 aaKnown RBP14.01□□□□□ -0.17
LINC01550-203ENST00000512901 SLIT3O75094 1523 aa14.01□□□□□ -0.17
LINC01550-203ENST00000512901 LRRC59Q96AG4 307 aaKnown RBP14□□□□□ -0.17
LINC01550-203ENST00000512901 SMG6Q86US8 1419 aaKnown RBP14□□□□□ -0.17
LINC01550-203ENST00000512901 GCP02774 474 aa14□□□□□ -0.17
LINC01550-203ENST00000512901 CDK12Q9NYV4 1490 aaPredicted RBP14□□□□□ -0.17
LINC01550-203ENST00000512901 MAP3K19Q56UN5 1328 aa14□□□□□ -0.17
LINC01550-203ENST00000512901 ZBTB7CA1YPR0 619 aa13.99□□□□□ -0.17
LINC01550-203ENST00000512901 AMPHP49418 695 aa13.99□□□□□ -0.17
LINC01550-203ENST00000512901 MED1Q15648 1581 aaPredicted RBP13.99□□□□□ -0.17
LINC01550-203ENST00000512901 LTN1O94822 1766 aa13.99□□□□□ -0.17
LINC01550-203ENST00000512901 NFAT5O94916 1531 aa13.99□□□□□ -0.17
LINC01550-203ENST00000512901 PHRF1Q9P1Y6 1649 aaKnown RBP13.99□□□□□ -0.17
LINC01550-203ENST00000512901 HAP1P54257 671 aaPredicted RBP13.99□□□□□ -0.17
LINC01550-203ENST00000512901 CABLES1Q8TDN4 633 aa13.99□□□□□ -0.17
LINC01550-203ENST00000512901 DIAPH1O60610 1272 aaKnown RBP13.98□□□□□ -0.17
LINC01550-203ENST00000512901 NUDCQ9Y266 331 aa13.98□□□□□ -0.17
LINC01550-203ENST00000512901 FLT4P35916 1363 aa13.97□□□□□ -0.17
LINC01550-203ENST00000512901 PNPLA6Q8IY17 1366 aa13.97□□□□□ -0.17
LINC01550-203ENST00000512901 PEAK1Q9H792 1746 aa13.97□□□□□ -0.17
LINC01550-203ENST00000512901 COL3A1P02461 1466 aaPredicted RBP13.97□□□□□ -0.17
LINC01550-203ENST00000512901 CRYBG1Q9Y4K1 1723 aa13.96□□□□□ -0.17
LINC01550-203ENST00000512901 COL16A1Q07092 1604 aaPredicted RBP13.96□□□□□ -0.17
LINC01550-203ENST00000512901 SHPRHQ149N8 1683 aa13.96□□□□□ -0.17
LINC01550-203ENST00000512901 INSRP06213 1382 aa13.96□□□□□ -0.17
LINC01550-203ENST00000512901 KIF24Q5T7B8 1368 aa13.96□□□□□ -0.17
LINC01550-203ENST00000512901 ZC3H6P61129 1189 aaKnown RBP13.96□□□□□ -0.18
LINC01550-203ENST00000512901 U2SURPO15042 1029 aaKnown RBP13.95□□□□□ -0.18
LINC01550-203ENST00000512901 RTL1A6NKG5 1358 aa13.95□□□□□ -0.18
LINC01550-203ENST00000512901 HOXC9P31274 260 aa13.95□□□□□ -0.18
LINC01550-203ENST00000512901 HSP90AB2PQ58FF8 381 aa13.95□□□□□ -0.18
LINC01550-203ENST00000512901 ARHGEF25Q86VW2 580 aa13.95□□□□□ -0.18
LINC01550-203ENST00000512901 ADAMTS8Q9UP79 889 aa13.95□□□□□ -0.18
LINC01550-203ENST00000512901 ABCA3Q99758 1704 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms