RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 OXER1Q8TDS5 423 aa11.03□□□□□ -0.64
USP46-208ENST00000512656 EFCAB6Q5THR3 1501 aa11.03□□□□□ -0.64
USP46-208ENST00000512656 PIK3C2BO00750 1634 aa11.02□□□□□ -0.65
USP46-208ENST00000512656 KDM5AP29375 1690 aaKnown RBP11.01□□□□□ -0.65
USP46-208ENST00000512656 NOS1P29475 1434 aa11.01□□□□□ -0.65
USP46-208ENST00000512656 HDGFP51858 240 aaKnown RBP11.01□□□□□ -0.65
USP46-208ENST00000512656 LSM11P83369 360 aaKnown RBP eCLIP11.01□□□□□ -0.65
USP46-208ENST00000512656 RPRD2Q5VT52 1461 aaKnown RBP11□□□□□ -0.65
USP46-208ENST00000512656 BBXQ8WY36 941 aaPredicted RBP11□□□□□ -0.65
USP46-208ENST00000512656 KCNA6P17658 529 aa10.99□□□□□ -0.65
USP46-208ENST00000512656 MFSD10Q14728 455 aa10.99□□□□□ -0.65
USP46-208ENST00000512656 BCANQ96GW7 911 aa10.99□□□□□ -0.65
USP46-208ENST00000512656 STRCP1A6NGW2 1772 aa10.98□□□□□ -0.65
USP46-208ENST00000512656 DDX27Q96GQ7 796 aaKnown RBP10.98□□□□□ -0.65
USP46-208ENST00000512656 ADGRB3O60242 1522 aa10.98□□□□□ -0.65
USP46-208ENST00000512656 ARHGAP33O14559 1287 aa10.97□□□□□ -0.65
USP46-208ENST00000512656 PPP1R15AO75807 674 aaPredicted RBP10.97□□□□□ -0.65
USP46-208ENST00000512656 PPP4R3BQ5MIZ7 849 aa10.97□□□□□ -0.65
USP46-208ENST00000512656 ANKRD13DQ6ZTN6 518 aa10.97□□□□□ -0.65
USP46-208ENST00000512656 PROSER2Q86WR7 435 aaPredicted RBP10.97□□□□□ -0.65
USP46-208ENST00000512656 SLC26A8Q96RN1 970 aa10.97□□□□□ -0.65
USP46-208ENST00000512656 LARP6Q9BRS8 491 aaKnown RBP10.97□□□□□ -0.65
USP46-208ENST00000512656 ROCK1Q13464 1354 aa10.97□□□□□ -0.65
USP46-208ENST00000512656 MED1Q15648 1581 aaPredicted RBP10.97□□□□□ -0.65
USP46-208ENST00000512656 ALKQ9UM73 1620 aa10.97□□□□□ -0.65
USP46-208ENST00000512656 POTEEQ6S8J3 1075 aa10.96□□□□□ -0.65
USP46-208ENST00000512656 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.96□□□□□ -0.65
USP46-208ENST00000512656 RNF166Q96A37 237 aaPredicted RBP10.96□□□□□ -0.65
USP46-208ENST00000512656 TET3O43151 1660 aa10.95□□□□□ -0.66
USP46-208ENST00000512656 TMEM94Q12767 1356 aa10.95□□□□□ -0.66
USP46-208ENST00000512656 FAM135BQ49AJ0 1406 aa10.94□□□□□ -0.66
USP46-208ENST00000512656 PLEKHG1Q9ULL1 1385 aa10.94□□□□□ -0.66
USP46-208ENST00000512656 NKTRP30414 1462 aaKnown RBP10.93□□□□□ -0.66
USP46-208ENST00000512656 RIMS2Q9UQ26 1411 aa10.93□□□□□ -0.66
USP46-208ENST00000512656 UPF1Q92900 1129 aaKnown RBP eCLIP10.93□□□□□ -0.66
USP46-208ENST00000512656 UNC13BO14795 1591 aa10.93□□□□□ -0.66
USP46-208ENST00000512656 ZFYVE9O95405 1425 aa10.92□□□□□ -0.66
USP46-208ENST00000512656 NUP155O75694 1391 aa10.92□□□□□ -0.66
USP46-208ENST00000512656 MSH6P52701 1360 aa10.92□□□□□ -0.66
USP46-208ENST00000512656 ITGAEP38570 1179 aa10.92□□□□□ -0.66
USP46-208ENST00000512656 ANO8Q9HCE9 1232 aaPredicted RBP10.92□□□□□ -0.66
USP46-208ENST00000512656 TBX22Q9Y458 520 aa10.92□□□□□ -0.66
USP46-208ENST00000512656 GCC2Q8IWJ2 1684 aa10.92□□□□□ -0.66
USP46-208ENST00000512656 TK2O00142 265 aa10.91□□□□□ -0.66
USP46-208ENST00000512656 AXIN2Q9Y2T1 843 aa10.91□□□□□ -0.66
USP46-208ENST00000512656 TMEM131LA2VDJ0 1609 aa10.9□□□□□ -0.66
USP46-208ENST00000512656 NWD1Q149M9 1564 aa10.9□□□□□ -0.67
USP46-208ENST00000512656 XIRP1Q702N8 1843 aaKnown RBP10.89□□□□□ -0.67
USP46-208ENST00000512656 IQGAP3Q86VI3 1631 aa10.89□□□□□ -0.67
USP46-208ENST00000512656 RTN4Q9NQC3 1192 aaKnown RBP10.89□□□□□ -0.67
USP46-208ENST00000512656 C14orf37Q86TY3 774 aa10.88□□□□□ -0.67
USP46-208ENST00000512656 CADPS2Q86UW7 1296 aa10.88□□□□□ -0.67
USP46-208ENST00000512656 RBM33Q96EV2 1170 aaKnown RBP10.88□□□□□ -0.67
USP46-208ENST00000512656 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.88□□□□□ -0.67
USP46-208ENST00000512656 SLAIN2Q9P270 581 aa10.88□□□□□ -0.67
USP46-208ENST00000512656 NCOA3Q9Y6Q9 1424 aa10.88□□□□□ -0.67
USP46-208ENST00000512656 PIK3R4Q99570 1358 aa10.88□□□□□ -0.67
USP46-208ENST00000512656 ADGRD1Q6QNK2 874 aa10.87□□□□□ -0.67
USP46-208ENST00000512656 PPARGC1BQ86YN6 1023 aaKnown RBP10.87□□□□□ -0.67
USP46-208ENST00000512656 E9PCH4 1651 aa10.87□□□□□ -0.67
USP46-208ENST00000512656 DIP2AQ14689 1571 aa10.86□□□□□ -0.67
USP46-208ENST00000512656 NUTM2DQ5VT03 806 aaPredicted RBP10.86□□□□□ -0.67
USP46-208ENST00000512656 EVI5O60447 810 aa10.85□□□□□ -0.67
USP46-208ENST00000512656 ATF3P18847 181 aa10.85□□□□□ -0.67
USP46-208ENST00000512656 FOSBP53539 338 aa10.85□□□□□ -0.67
USP46-208ENST00000512656 MAP3K9P80192 1104 aa10.85□□□□□ -0.67
USP46-208ENST00000512656 ZNF454Q8N9F8 522 aa10.85□□□□□ -0.67
USP46-208ENST00000512656 SPRYD3Q8NCJ5 442 aa10.85□□□□□ -0.67
USP46-208ENST00000512656 C19orf44Q9H6X5 657 aa10.85□□□□□ -0.67
USP46-208ENST00000512656 BCL2L12Q9HB09 334 aa10.85□□□□□ -0.67
USP46-208ENST00000512656 MYO5BQ9ULV0 1848 aa10.85□□□□□ -0.67
USP46-208ENST00000512656 ROBO1Q9Y6N7 1651 aa10.85□□□□□ -0.67
USP46-208ENST00000512656 ADAMTS13Q76LX8 1427 aa10.84□□□□□ -0.67
USP46-208ENST00000512656 CHD2O14647 1828 aaKnown RBP10.84□□□□□ -0.67
USP46-208ENST00000512656 ZNF326Q5BKZ1 582 aaKnown RBP10.84□□□□□ -0.67
USP46-208ENST00000512656 CAMK2BQ13554 666 aa10.83□□□□□ -0.68
USP46-208ENST00000512656 EMILIN3Q9NT22 766 aa10.83□□□□□ -0.68
USP46-208ENST00000512656 TRPM2O94759 1503 aa10.83□□□□□ -0.68
USP46-208ENST00000512656 JCADQ9P266 1359 aa10.82□□□□□ -0.68
USP46-208ENST00000512656 PSEN2P49810 448 aa10.82□□□□□ -0.68
USP46-208ENST00000512656 AMOTL2Q9Y2J4 779 aa10.82□□□□□ -0.68
USP46-208ENST00000512656 RRBP1Q9P2E9 1410 aaKnown RBP10.82□□□□□ -0.68
USP46-208ENST00000512656 HRO43593 1189 aa10.81□□□□□ -0.68
USP46-208ENST00000512656 DMRTA1Q5VZB9 504 aa10.81□□□□□ -0.68
USP46-208ENST00000512656 SLC4A5Q9BY07 1137 aa10.81□□□□□ -0.68
USP46-208ENST00000512656 RGS17Q9UGC6 210 aaPredicted RBP10.81□□□□□ -0.68
USP46-208ENST00000512656 KCNK17Q96T54 332 aa10.8□□□□□ -0.68
USP46-208ENST00000512656 SPHKAPQ2M3C7 1700 aa10.79□□□□□ -0.68
USP46-208ENST00000512656 NAIPQ13075 1403 aa10.79□□□□□ -0.68
USP46-208ENST00000512656 TRIM52Q96A61 297 aa10.79□□□□□ -0.68
USP46-208ENST00000512656 PHLPP1O60346 1717 aa10.78□□□□□ -0.68
USP46-208ENST00000512656 SETBP1Q9Y6X0 1596 aa10.78□□□□□ -0.68
USP46-208ENST00000512656 DCCP43146 1447 aa10.78□□□□□ -0.68
USP46-208ENST00000512656 PTPREP23469 700 aa10.78□□□□□ -0.68
USP46-208ENST00000512656 ZDHHC16Q969W1 377 aa10.78□□□□□ -0.68
USP46-208ENST00000512656 SPATA31A6Q5VVP1 1343 aa10.78□□□□□ -0.68
USP46-208ENST00000512656 PTPRUQ92729 1446 aa10.77□□□□□ -0.68
USP46-208ENST00000512656 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.76□□□□□ -0.69
USP46-208ENST00000512656 MEX3CQ5U5Q3 659 aaKnown RBP10.76□□□□□ -0.69
USP46-208ENST00000512656 POTEAQ6S8J7 498 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms