RNA–Protein interactions for RNA: ENST00000512479.1

PTP4A1P4-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 4, humanhuman

BASIC

Gene PTP4A1P4, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P4-201ENST00000512479 GRIPAP1Q4V328 841 aa7.63□□□□□ -1.19
PTP4A1P4-201ENST00000512479 RNF19BQ6ZMZ0 732 aa7.63□□□□□ -1.19
PTP4A1P4-201ENST00000512479 TESPA1A2RU30 521 aaPredicted RBP7.62□□□□□ -1.19
PTP4A1P4-201ENST00000512479 BAG6P46379 1132 aa7.62□□□□□ -1.19
PTP4A1P4-201ENST00000512479 GCGRP47871 477 aa7.62□□□□□ -1.19
PTP4A1P4-201ENST00000512479 RNFT1Q5M7Z0 435 aa7.6□□□□□ -1.19
PTP4A1P4-201ENST00000512479 GPR37O15354 613 aa7.59□□□□□ -1.19
PTP4A1P4-201ENST00000512479 DXOO77932 396 aaKnown RBP7.59□□□□□ -1.19
PTP4A1P4-201ENST00000512479 Q3C1V9 767 aa7.59□□□□□ -1.19
PTP4A1P4-201ENST00000512479 ENAMQ9NRM1 1142 aa7.59□□□□□ -1.19
PTP4A1P4-201ENST00000512479 FURINP09958 794 aa7.58□□□□□ -1.2
PTP4A1P4-201ENST00000512479 WDR4P57081 412 aaKnown RBP7.58□□□□□ -1.2
PTP4A1P4-201ENST00000512479 NLRP7Q8WX94 980 aa7.58□□□□□ -1.2
PTP4A1P4-201ENST00000512479 NANOS1Q8WY41 292 aaKnown RBP7.58□□□□□ -1.2
PTP4A1P4-201ENST00000512479 KRTAP4-7Q9BYR0 210 aa7.58□□□□□ -1.2
PTP4A1P4-201ENST00000512479 ADH1CP00326 375 aa7.57□□□□□ -1.2
PTP4A1P4-201ENST00000512479 TIMP2P16035 220 aa7.57□□□□□ -1.2
PTP4A1P4-201ENST00000512479 NNTQ13423 1086 aa7.57□□□□□ -1.2
PTP4A1P4-201ENST00000512479 C6orf118Q5T5N4 469 aa7.57□□□□□ -1.2
PTP4A1P4-201ENST00000512479 PLEKHG3A1L390 1219 aa7.56□□□□□ -1.2
PTP4A1P4-201ENST00000512479 PODNQ7Z5L7 613 aa7.56□□□□□ -1.2
PTP4A1P4-201ENST00000512479 GPIHBP1Q8IV16 184 aa7.56□□□□□ -1.2
PTP4A1P4-201ENST00000512479 BEND7Q8N7W2 519 aaPredicted RBP7.56□□□□□ -1.2
PTP4A1P4-201ENST00000512479 PHOX2BQ99453 314 aa7.55□□□□□ -1.2
PTP4A1P4-201ENST00000512479 CNTNAP5Q8WYK1 1306 aa7.54□□□□□ -1.2
PTP4A1P4-201ENST00000512479 LYPD4Q6UWN0 246 aa7.54□□□□□ -1.2
PTP4A1P4-201ENST00000512479 KRTAP19-1Q8IUB9 90 aa7.54□□□□□ -1.2
PTP4A1P4-201ENST00000512479 USB1Q9BQ65 265 aaKnown RBP7.54□□□□□ -1.2
PTP4A1P4-201ENST00000512479 GOLGA2P5Q9HBQ8 144 aa7.54□□□□□ -1.2
PTP4A1P4-201ENST00000512479 UPP2O95045 317 aa7.53□□□□□ -1.2
PTP4A1P4-201ENST00000512479 BMP2P12643 396 aa7.52□□□□□ -1.21
PTP4A1P4-201ENST00000512479 ADAMTS2O95450 1211 aa7.51□□□□□ -1.21
PTP4A1P4-201ENST00000512479 TLL2Q9Y6L7 1015 aa7.51□□□□□ -1.21
PTP4A1P4-201ENST00000512479 KDM4AO75164 1064 aa7.5□□□□□ -1.21
PTP4A1P4-201ENST00000512479 CD46P15529 392 aa7.5□□□□□ -1.21
PTP4A1P4-201ENST00000512479 USP46P62068 366 aa7.5□□□□□ -1.21
PTP4A1P4-201ENST00000512479 DNMT3LQ9UJW3 386 aa7.5□□□□□ -1.21
PTP4A1P4-201ENST00000512479 CELA2BP08218 269 aaPredicted RBP7.49□□□□□ -1.21
PTP4A1P4-201ENST00000512479 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.49□□□□□ -1.21
PTP4A1P4-201ENST00000512479 SOS2Q07890 1332 aaPredicted RBP7.49□□□□□ -1.21
PTP4A1P4-201ENST00000512479 PTSQ03393 145 aa7.48□□□□□ -1.21
PTP4A1P4-201ENST00000512479 MPNDQ8N594 471 aa7.48□□□□□ -1.21
PTP4A1P4-201ENST00000512479 SH3BP2P78314 561 aa7.47□□□□□ -1.21
PTP4A1P4-201ENST00000512479 MAP2K5Q13163 448 aa7.47□□□□□ -1.21
PTP4A1P4-201ENST00000512479 ZMYM1Q5SVZ6 1142 aa7.47□□□□□ -1.21
PTP4A1P4-201ENST00000512479 LCE1DQ5T752 114 aa7.47□□□□□ -1.21
PTP4A1P4-201ENST00000512479 SV2AQ7L0J3 742 aa7.47□□□□□ -1.21
PTP4A1P4-201ENST00000512479 KLF16Q9BXK1 252 aaPredicted RBP7.47□□□□□ -1.21
PTP4A1P4-201ENST00000512479 VWA5B2Q8N398 1253 aa7.46□□□□□ -1.22
PTP4A1P4-201ENST00000512479 CDC14CA4D256 554 aa7.45□□□□□ -1.22
PTP4A1P4-201ENST00000512479 TULP1O00294 542 aaPredicted RBP7.45□□□□□ -1.22
PTP4A1P4-201ENST00000512479 ZIC2O95409 532 aaPredicted RBP7.45□□□□□ -1.22
PTP4A1P4-201ENST00000512479 SRSF11Q05519 484 aaKnown RBP7.45□□□□□ -1.22
PTP4A1P4-201ENST00000512479 LINC00528Q8N1L1 170 aa7.45□□□□□ -1.22
PTP4A1P4-201ENST00000512479 CCDC155Q8N6L0 562 aa7.45□□□□□ -1.22
PTP4A1P4-201ENST00000512479 HOXA2O43364 376 aa7.44□□□□□ -1.22
PTP4A1P4-201ENST00000512479 JUNDP17535 347 aa7.44□□□□□ -1.22
PTP4A1P4-201ENST00000512479 PLCB2Q00722 1185 aa7.44□□□□□ -1.22
PTP4A1P4-201ENST00000512479 VARSP26640 1264 aaKnown RBP7.43□□□□□ -1.22
PTP4A1P4-201ENST00000512479 MDM2Q00987 491 aaPredicted RBP7.43□□□□□ -1.22
PTP4A1P4-201ENST00000512479 NEDD1Q8NHV4 660 aa7.43□□□□□ -1.22
PTP4A1P4-201ENST00000512479 ZFAND3Q9H8U3 227 aa7.43□□□□□ -1.22
PTP4A1P4-201ENST00000512479 PTCRAQ6ISU1 281 aaPredicted RBP7.42□□□□□ -1.22
PTP4A1P4-201ENST00000512479 HLA-CQ95604 372 aa7.42□□□□□ -1.22
PTP4A1P4-201ENST00000512479 SCO2A0A1W2PP80 73 aa7.41□□□□□ -1.22
PTP4A1P4-201ENST00000512479 IRF6O14896 467 aa7.41□□□□□ -1.22
PTP4A1P4-201ENST00000512479 KRBA1A5PL33 1030 aa7.4□□□□□ -1.22
PTP4A1P4-201ENST00000512479 COBLO75128 1261 aa7.4□□□□□ -1.22
PTP4A1P4-201ENST00000512479 ITPKCQ96DU7 683 aa7.4□□□□□ -1.22
PTP4A1P4-201ENST00000512479 NUDT12Q9BQG2 462 aa7.4□□□□□ -1.22
PTP4A1P4-201ENST00000512479 MINK1Q8N4C8 1332 aaPredicted RBP7.4□□□□□ -1.22
PTP4A1P4-201ENST00000512479 ITGA6P23229 1130 aa7.39□□□□□ -1.23
PTP4A1P4-201ENST00000512479 RETREG3Q86VR2 466 aa7.39□□□□□ -1.23
PTP4A1P4-201ENST00000512479 NUTM1Q86Y26 1132 aa7.39□□□□□ -1.23
PTP4A1P4-201ENST00000512479 GPCPD1Q9NPB8 672 aa7.39□□□□□ -1.23
PTP4A1P4-201ENST00000512479 TTLL8A6PVC2 850 aa7.38□□□□□ -1.23
PTP4A1P4-201ENST00000512479 CLCN1P35523 988 aa7.38□□□□□ -1.23
PTP4A1P4-201ENST00000512479 GUCA2AQ02747 115 aa7.38□□□□□ -1.23
PTP4A1P4-201ENST00000512479 SH3RF1Q7Z6J0 888 aa7.38□□□□□ -1.23
PTP4A1P4-201ENST00000512479 ALYREFQ86V81 257 aaKnown RBP7.38□□□□□ -1.23
PTP4A1P4-201ENST00000512479 MEIOBQ8N635 442 aa7.37□□□□□ -1.23
PTP4A1P4-201ENST00000512479 KRI1Q8N9T8 703 aaKnown RBP7.37□□□□□ -1.23
PTP4A1P4-201ENST00000512479 CCDC102AQ96A19 550 aa7.37□□□□□ -1.23
PTP4A1P4-201ENST00000512479 SLC35F4A4IF30 521 aa7.36□□□□□ -1.23
PTP4A1P4-201ENST00000512479 SYMPKQ92797 1274 aaKnown RBP7.36□□□□□ -1.23
PTP4A1P4-201ENST00000512479 TSEN34Q9BSV6 310 aaKnown RBP7.36□□□□□ -1.23
PTP4A1P4-201ENST00000512479 FAM217BQ9NTX9 383 aaPredicted RBP7.36□□□□□ -1.23
PTP4A1P4-201ENST00000512479 SPTLC1O15269 473 aa7.35□□□□□ -1.23
PTP4A1P4-201ENST00000512479 CCNYL3P0C7X3 344 aa7.35□□□□□ -1.23
PTP4A1P4-201ENST00000512479 MS4A1P11836 297 aa7.35□□□□□ -1.23
PTP4A1P4-201ENST00000512479 LINC01559Q495D7 138 aa7.35□□□□□ -1.23
PTP4A1P4-201ENST00000512479 NBPF11Q86T75 865 aa7.35□□□□□ -1.23
PTP4A1P4-201ENST00000512479 SEMA6BQ9H3T3 888 aa7.35□□□□□ -1.23
PTP4A1P4-201ENST00000512479 FIGNL2A6NMB9 653 aa7.34□□□□□ -1.23
PTP4A1P4-201ENST00000512479 C6orf229H3BNL8 230 aa7.34□□□□□ -1.23
PTP4A1P4-201ENST00000512479 ITGB7P26010 798 aa7.34□□□□□ -1.23
PTP4A1P4-201ENST00000512479 HAP1P54257 671 aaPredicted RBP7.34□□□□□ -1.23
PTP4A1P4-201ENST00000512479 FDX1P10109 184 aa7.33□□□□□ -1.24
PTP4A1P4-201ENST00000512479 BCRP11274 1271 aa7.33□□□□□ -1.24
PTP4A1P4-201ENST00000512479 PTPRNQ16849 979 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms