RNA–Protein interactions for RNA: ENST00000512394.5

SNX2-211, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-211ENST00000512394 PAK3O75914 559 aaPredicted RBP24.46■■□□□ 1.51
SNX2-211ENST00000512394 COL14A1Q05707 1796 aaKnown RBP24.46■■□□□ 1.51
SNX2-211ENST00000512394 NRAPQ86VF7 1730 aa24.44■■□□□ 1.5
SNX2-211ENST00000512394 POLR3AO14802 1390 aaPredicted RBP24.44■■□□□ 1.5
SNX2-211ENST00000512394 NEUROD1Q13562 356 aa24.44■■□□□ 1.5
SNX2-211ENST00000512394 CCDC61Q9Y6R9 512 aa24.44■■□□□ 1.5
SNX2-211ENST00000512394 VPS72Q15906 364 aa24.42■■□□□ 1.5
SNX2-211ENST00000512394 PHRF1Q9P1Y6 1649 aaKnown RBP24.42■■□□□ 1.5
SNX2-211ENST00000512394 EP400Q96L91 3159 aa24.41■■□□□ 1.5
SNX2-211ENST00000512394 ACEP12821 1306 aa24.4■■□□□ 1.5
SNX2-211ENST00000512394 FAM83GA6ND36 823 aa24.4■■□□□ 1.5
SNX2-211ENST00000512394 SRPK2P78362 688 aaKnown RBP24.4■■□□□ 1.5
SNX2-211ENST00000512394 PLEKHG3A1L390 1219 aa24.39■■□□□ 1.49
SNX2-211ENST00000512394 ROCK2O75116 1388 aaKnown RBP24.39■■□□□ 1.49
SNX2-211ENST00000512394 BRWD3Q6RI45 1802 aa24.38■■□□□ 1.49
SNX2-211ENST00000512394 PPIP5K1Q6PFW1 1433 aa24.38■■□□□ 1.49
SNX2-211ENST00000512394 CCDC9Q9Y3X0 531 aaKnown RBP24.38■■□□□ 1.49
SNX2-211ENST00000512394 NBPF8Q3BBV2 869 aa24.36■■□□□ 1.49
SNX2-211ENST00000512394 BTG4Q9NY30 223 aa24.36■■□□□ 1.49
SNX2-211ENST00000512394 PCGF6Q9BYE7 350 aa24.35■■□□□ 1.49
SNX2-211ENST00000512394 CABP2Q9NPB3 220 aa24.35■■□□□ 1.49
SNX2-211ENST00000512394 PRDM11Q9NQV5 511 aa24.33■■□□□ 1.49
SNX2-211ENST00000512394 NRKQ7Z2Y5 1582 aa24.32■■□□□ 1.48
SNX2-211ENST00000512394 CLSPNQ9HAW4 1339 aa24.32■■□□□ 1.48
SNX2-211ENST00000512394 SEPT12Q8IYM1 358 aa24.31■■□□□ 1.48
SNX2-211ENST00000512394 EVC2Q86UK5 1308 aa24.31■■□□□ 1.48
SNX2-211ENST00000512394 KIAA0232Q92628 1395 aa24.3■■□□□ 1.48
SNX2-211ENST00000512394 ONECUT3O60422 494 aaPredicted RBP24.3■■□□□ 1.48
SNX2-211ENST00000512394 CCDC125Q86Z20 511 aa24.3■■□□□ 1.48
SNX2-211ENST00000512394 BRD4O60885 1362 aaPredicted RBP24.29■■□□□ 1.48
SNX2-211ENST00000512394 NUTM2GQ5VZR2 741 aa24.29■■□□□ 1.48
SNX2-211ENST00000512394 ABTB2Q8N961 1025 aa24.29■■□□□ 1.48
SNX2-211ENST00000512394 TONSLQ96HA7 1378 aa24.29■■□□□ 1.48
SNX2-211ENST00000512394 A0A0G2JS52 829 aa24.26■■□□□ 1.47
SNX2-211ENST00000512394 MYT1Q01538 1121 aa24.26■■□□□ 1.47
SNX2-211ENST00000512394 USP6P35125 1406 aa24.26■■□□□ 1.47
SNX2-211ENST00000512394 CABP1Q9NZU7 370 aa24.25■■□□□ 1.47
SNX2-211ENST00000512394 USP19O94966 1318 aa24.25■■□□□ 1.47
SNX2-211ENST00000512394 BLMP54132 1417 aaPredicted RBP24.25■■□□□ 1.47
SNX2-211ENST00000512394 ZC3H6P61129 1189 aaKnown RBP24.24■■□□□ 1.47
SNX2-211ENST00000512394 FAM98CQ17RN3 349 aaKnown RBP24.24■■□□□ 1.47
SNX2-211ENST00000512394 KRT27Q7Z3Y8 459 aa24.24■■□□□ 1.47
SNX2-211ENST00000512394 SPATA31A5Q5VU36 1347 aa24.24■■□□□ 1.47
SNX2-211ENST00000512394 SPATA31A7Q8IWB4 1347 aa24.24■■□□□ 1.47
SNX2-211ENST00000512394 CHRNA2Q15822 529 aa24.23■■□□□ 1.47
SNX2-211ENST00000512394 NLRP13Q86W25 1043 aa24.23■■□□□ 1.47
SNX2-211ENST00000512394 THSD7AQ9UPZ6 1657 aa24.23■■□□□ 1.47
SNX2-211ENST00000512394 AKAP12Q02952 1782 aa24.23■■□□□ 1.47
SNX2-211ENST00000512394 CPDO75976 1380 aa24.22■■□□□ 1.47
SNX2-211ENST00000512394 LMO7Q8WWI1 1683 aa24.21■■□□□ 1.47
SNX2-211ENST00000512394 SBNO2Q9Y2G9 1366 aa24.21■■□□□ 1.47
SNX2-211ENST00000512394 PIK3C2AO00443 1686 aa24.21■■□□□ 1.47
SNX2-211ENST00000512394 CARD11Q9BXL7 1154 aa24.2■■□□□ 1.46
SNX2-211ENST00000512394 STRN4Q9NRL3 753 aa24.19■■□□□ 1.46
SNX2-211ENST00000512394 SLIT3O75094 1523 aa24.18■■□□□ 1.46
SNX2-211ENST00000512394 SSH2Q76I76 1423 aa24.18■■□□□ 1.46
SNX2-211ENST00000512394 SPATA31A1Q5TZJ5 1347 aa24.17■■□□□ 1.46
SNX2-211ENST00000512394 GCP02774 474 aa24.17■■□□□ 1.46
SNX2-211ENST00000512394 SF3B2Q13435 895 aaKnown RBP24.17■■□□□ 1.46
SNX2-211ENST00000512394 TIMELESSQ9UNS1 1208 aa24.17■■□□□ 1.46
SNX2-211ENST00000512394 CAMTA1Q9Y6Y1 1673 aa24.17■■□□□ 1.46
SNX2-211ENST00000512394 NLRP6P59044 892 aa24.15■■□□□ 1.46
SNX2-211ENST00000512394 ZNF692Q9BU19 519 aaPredicted RBP24.15■■□□□ 1.46
SNX2-211ENST00000512394 EVA1CP58658 441 aa24.14■■□□□ 1.45
SNX2-211ENST00000512394 MON2Q7Z3U7 1717 aa24.14■■□□□ 1.45
SNX2-211ENST00000512394 RGPD1P0DJD0 1748 aa24.13■■□□□ 1.45
SNX2-211ENST00000512394 CPSF1Q10570 1443 aaKnown RBP24.12■■□□□ 1.45
SNX2-211ENST00000512394 ZRANB1Q9UGI0 708 aa24.12■■□□□ 1.45
SNX2-211ENST00000512394 COL5A2P05997 1499 aaPredicted RBP24.11■■□□□ 1.45
SNX2-211ENST00000512394 TTC21BQ7Z4L5 1316 aa24.1■■□□□ 1.45
SNX2-211ENST00000512394 TTC21AQ8NDW8 1320 aa24.1■■□□□ 1.45
SNX2-211ENST00000512394 KTN1Q86UP2 1357 aaKnown RBP24.09■■□□□ 1.45
SNX2-211ENST00000512394 USP35Q9P2H5 1018 aa24.09■■□□□ 1.45
SNX2-211ENST00000512394 LARP1Q6PKG0 1096 aaKnown RBP24.08■■□□□ 1.45
SNX2-211ENST00000512394 BARGINQ6ZT62 677 aa24.08■■□□□ 1.45
SNX2-211ENST00000512394 DEFB132Q7Z7B7 95 aa24.08■■□□□ 1.45
SNX2-211ENST00000512394 AATKQ6ZMQ8 1374 aa24.07■■□□□ 1.44
SNX2-211ENST00000512394 ZBTB7CA1YPR0 619 aa24.07■■□□□ 1.44
SNX2-211ENST00000512394 COL18A1P39060 1754 aa24.06■■□□□ 1.44
SNX2-211ENST00000512394 TNS1Q9HBL0 1735 aaKnown RBP24.05■■□□□ 1.44
SNX2-211ENST00000512394 TCP11L2Q8N4U5 519 aa24.05■■□□□ 1.44
SNX2-211ENST00000512394 KCNH5Q8NCM2 988 aa24.05■■□□□ 1.44
SNX2-211ENST00000512394 PARP4Q9UKK3 1724 aaKnown RBP24.04■■□□□ 1.44
SNX2-211ENST00000512394 CRB1P82279 1406 aa24.04■■□□□ 1.44
SNX2-211ENST00000512394 BAG6P46379 1132 aa24.04■■□□□ 1.44
SNX2-211ENST00000512394 FAM182BQ5T319 152 aa24.04■■□□□ 1.44
SNX2-211ENST00000512394 THRAP3Q9Y2W1 955 aaKnown RBP24.04■■□□□ 1.44
SNX2-211ENST00000512394 USP54Q70EL1 1684 aa24.04■■□□□ 1.44
SNX2-211ENST00000512394 CD163L1Q9NR16 1453 aa24.03■■□□□ 1.44
SNX2-211ENST00000512394 CCER1Q8TC90 406 aaPredicted RBP24.02■■□□□ 1.44
SNX2-211ENST00000512394 NFAT5O94916 1531 aa24.01■■□□□ 1.43
SNX2-211ENST00000512394 TMC1Q8TDI8 760 aa24.01■■□□□ 1.43
SNX2-211ENST00000512394 WNK3Q9BYP7 1800 aa24■■□□□ 1.43
SNX2-211ENST00000512394 FAM196AQ6ZSG2 479 aa24■■□□□ 1.43
SNX2-211ENST00000512394 HDGFL2Q7Z4V5 671 aaPredicted RBP24■■□□□ 1.43
SNX2-211ENST00000512394 PUS7Q96PZ0 661 aaKnown RBP24■■□□□ 1.43
SNX2-211ENST00000512394 RGPD5Q99666 1765 aa24■■□□□ 1.43
SNX2-211ENST00000512394 ABCC6O95255 1503 aa24■■□□□ 1.43
SNX2-211ENST00000512394 PDE3BQ13370 1112 aa23.99■■□□□ 1.43
SNX2-211ENST00000512394 SOX12O15370 315 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms