RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 UBXN4Q92575 508 aa8.79□□□□□ -1
CHD1-208ENST00000512392 RNF166Q96A37 237 aaPredicted RBP8.79□□□□□ -1
CHD1-208ENST00000512392 PRR14Q9BWN1 585 aa8.79□□□□□ -1
CHD1-208ENST00000512392 SUGT1Q9Y2Z0 365 aa8.79□□□□□ -1
CHD1-208ENST00000512392 CFHP08603 1231 aa8.78□□□□□ -1
CHD1-208ENST00000512392 KMT5BQ4FZB7 885 aa8.78□□□□□ -1
CHD1-208ENST00000512392 MICAL1Q8TDZ2 1067 aa8.78□□□□□ -1
CHD1-208ENST00000512392 WBP1LQ9NX94 342 aa8.78□□□□□ -1
CHD1-208ENST00000512392 DIXDC1Q155Q3 683 aa8.77□□□□□ -1
CHD1-208ENST00000512392 CFAP70Q5T0N1 1121 aa8.77□□□□□ -1
CHD1-208ENST00000512392 NYAP1Q6ZVC0 841 aa8.77□□□□□ -1
CHD1-208ENST00000512392 TMEM88BA6NKF7 163 aa8.77□□□□□ -1.01
CHD1-208ENST00000512392 RAB11FIP3O75154 756 aa8.77□□□□□ -1.01
CHD1-208ENST00000512392 EXOC8Q8IYI6 725 aa8.77□□□□□ -1.01
CHD1-208ENST00000512392 POLR3EQ9NVU0 708 aa8.77□□□□□ -1.01
CHD1-208ENST00000512392 FBXO31Q5XUX0 539 aaPredicted RBP8.76□□□□□ -1.01
CHD1-208ENST00000512392 NUTM1Q86Y26 1132 aa8.76□□□□□ -1.01
CHD1-208ENST00000512392 PTPN5P54829 565 aa8.75□□□□□ -1.01
CHD1-208ENST00000512392 USP46P62068 366 aa8.75□□□□□ -1.01
CHD1-208ENST00000512392 MMRN1Q13201 1228 aa8.75□□□□□ -1.01
CHD1-208ENST00000512392 PKNOX2Q96KN3 472 aa8.75□□□□□ -1.01
CHD1-208ENST00000512392 GNEQ9Y223 722 aaKnown RBP8.75□□□□□ -1.01
CHD1-208ENST00000512392 ACTN4O43707 911 aaKnown RBP8.75□□□□□ -1.01
CHD1-208ENST00000512392 SPIRE2Q8WWL2 714 aa8.75□□□□□ -1.01
CHD1-208ENST00000512392 PRDM10Q9NQV6 1147 aa8.75□□□□□ -1.01
CHD1-208ENST00000512392 ATP1B4Q9UN42 357 aaPredicted RBP8.75□□□□□ -1.01
CHD1-208ENST00000512392 ZC3H6P61129 1189 aaKnown RBP8.74□□□□□ -1.01
CHD1-208ENST00000512392 TBC1D2Q9BYX2 928 aa8.74□□□□□ -1.01
CHD1-208ENST00000512392 HCSTQ9UBK5 93 aa8.74□□□□□ -1.01
CHD1-208ENST00000512392 TPD52L2O43399 206 aaKnown RBP8.73□□□□□ -1.01
CHD1-208ENST00000512392 APLP1P51693 650 aa8.73□□□□□ -1.01
CHD1-208ENST00000512392 NAALADL2Q58DX5 795 aa8.73□□□□□ -1.01
CHD1-208ENST00000512392 ADAMTS19Q8TE59 1207 aa8.73□□□□□ -1.01
CHD1-208ENST00000512392 BCL2L13Q9BXK5 485 aa8.73□□□□□ -1.01
CHD1-208ENST00000512392 MYH16Q9H6N6 1097 aa8.73□□□□□ -1.01
CHD1-208ENST00000512392 GRIPAP1Q4V328 841 aa8.72□□□□□ -1.01
CHD1-208ENST00000512392 DPH6Q7L8W6 267 aa8.72□□□□□ -1.01
CHD1-208ENST00000512392 GIPC2Q8TF65 315 aa8.72□□□□□ -1.01
CHD1-208ENST00000512392 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.72□□□□□ -1.01
CHD1-208ENST00000512392 ATP6V1AP38606 617 aa8.72□□□□□ -1.01
CHD1-208ENST00000512392 FUT2Q10981 343 aa8.71□□□□□ -1.02
CHD1-208ENST00000512392 CDCA7Q9BWT1 371 aaPredicted RBP8.71□□□□□ -1.02
CHD1-208ENST00000512392 ABL2P42684 1182 aa8.7□□□□□ -1.02
CHD1-208ENST00000512392 MTMR14Q8NCE2 650 aa8.7□□□□□ -1.02
CHD1-208ENST00000512392 HOXA2O43364 376 aa8.7□□□□□ -1.02
CHD1-208ENST00000512392 GJA5P36382 358 aa8.7□□□□□ -1.02
CHD1-208ENST00000512392 MYSM1Q5VVJ2 828 aa8.7□□□□□ -1.02
CHD1-208ENST00000512392 GPATCH3Q96I76 525 aa8.7□□□□□ -1.02
CHD1-208ENST00000512392 HDGFL1Q5TGJ6 251 aa8.69□□□□□ -1.02
CHD1-208ENST00000512392 PCDHB3Q9Y5E6 796 aa8.69□□□□□ -1.02
CHD1-208ENST00000512392 CENPBP07199 599 aaPredicted RBP8.68□□□□□ -1.02
CHD1-208ENST00000512392 ZNF326Q5BKZ1 582 aaKnown RBP8.68□□□□□ -1.02
CHD1-208ENST00000512392 MOXD2PA6NHM9 499 aa8.68□□□□□ -1.02
CHD1-208ENST00000512392 SPTLC1O15269 473 aa8.68□□□□□ -1.02
CHD1-208ENST00000512392 MORN1Q5T089 497 aa8.68□□□□□ -1.02
CHD1-208ENST00000512392 RIC3Q7Z5B4 369 aa8.68□□□□□ -1.02
CHD1-208ENST00000512392 BANK1Q8NDB2 785 aa8.68□□□□□ -1.02
CHD1-208ENST00000512392 VTI1AQ96AJ9 217 aa8.68□□□□□ -1.02
CHD1-208ENST00000512392 SBNO2Q9Y2G9 1366 aa8.67□□□□□ -1.02
CHD1-208ENST00000512392 RFC5P40937 340 aa8.67□□□□□ -1.02
CHD1-208ENST00000512392 CDCA8Q53HL2 280 aa8.67□□□□□ -1.02
CHD1-208ENST00000512392 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.67□□□□□ -1.02
CHD1-208ENST00000512392 TUSC1Q2TAM9 212 aa8.66□□□□□ -1.02
CHD1-208ENST00000512392 RSBN1LQ6PCB5 846 aaPredicted RBP8.66□□□□□ -1.02
CHD1-208ENST00000512392 NDUFV2P19404 249 aa8.66□□□□□ -1.02
CHD1-208ENST00000512392 PUS10Q3MIT2 529 aaKnown RBP8.66□□□□□ -1.02
CHD1-208ENST00000512392 TBC1D2BQ9UPU7 963 aa8.66□□□□□ -1.02
CHD1-208ENST00000512392 NR1I2O75469 434 aa8.65□□□□□ -1.02
CHD1-208ENST00000512392 MAP4K4O95819 1239 aaPredicted RBP8.65□□□□□ -1.02
CHD1-208ENST00000512392 FDX1P10109 184 aa8.65□□□□□ -1.02
CHD1-208ENST00000512392 CLK2P49760 499 aaKnown RBP8.65□□□□□ -1.02
CHD1-208ENST00000512392 ANAPC15P60006 121 aa8.64□□□□□ -1.03
CHD1-208ENST00000512392 TAGLNQ01995 201 aaKnown RBP8.64□□□□□ -1.03
CHD1-208ENST00000512392 SF3A1Q15459 793 aaKnown RBP8.64□□□□□ -1.03
CHD1-208ENST00000512392 HSP90AB4PQ58FF6 505 aa8.64□□□□□ -1.03
CHD1-208ENST00000512392 GORABQ5T7V8 394 aa8.64□□□□□ -1.03
CHD1-208ENST00000512392 BLOC1S3Q6QNY0 202 aa8.64□□□□□ -1.03
CHD1-208ENST00000512392 PPP1R12CQ9BZL4 782 aa8.64□□□□□ -1.03
CHD1-208ENST00000512392 KLHL42Q9P2K6 505 aa8.64□□□□□ -1.03
CHD1-208ENST00000512392 ERCC3P19447 782 aa8.64□□□□□ -1.03
CHD1-208ENST00000512392 PLCD4Q9BRC7 762 aa8.64□□□□□ -1.03
CHD1-208ENST00000512392 LIMD1Q9UGP4 676 aa8.64□□□□□ -1.03
CHD1-208ENST00000512392 SLC27A5Q9Y2P5 690 aa8.64□□□□□ -1.03
CHD1-208ENST00000512392 MAFGO15525 162 aa8.63□□□□□ -1.03
CHD1-208ENST00000512392 PEX14O75381 377 aa8.63□□□□□ -1.03
CHD1-208ENST00000512392 Q3C1V9 767 aa8.63□□□□□ -1.03
CHD1-208ENST00000512392 TJAP1Q5JTD0 557 aa8.63□□□□□ -1.03
CHD1-208ENST00000512392 SCUBE3Q8IX30 993 aa8.63□□□□□ -1.03
CHD1-208ENST00000512392 HLA-CQ95604 372 aa8.63□□□□□ -1.03
CHD1-208ENST00000512392 SGSM3Q96HU1 749 aa8.63□□□□□ -1.03
CHD1-208ENST00000512392 NAP1L5Q96NT1 182 aaPredicted RBP8.62□□□□□ -1.03
CHD1-208ENST00000512392 MTRQ99707 1265 aa8.62□□□□□ -1.03
CHD1-208ENST00000512392 IL21Q9HBE4 155 aa8.62□□□□□ -1.03
CHD1-208ENST00000512392 SALL2Q9Y467 1007 aaPredicted RBP8.62□□□□□ -1.03
CHD1-208ENST00000512392 RECKO95980 971 aa8.62□□□□□ -1.03
CHD1-208ENST00000512392 COPS2P61201 443 aa8.62□□□□□ -1.03
CHD1-208ENST00000512392 GUCA2AQ02747 115 aa8.62□□□□□ -1.03
CHD1-208ENST00000512392 FAM50AQ14320 339 aaKnown RBP8.62□□□□□ -1.03
CHD1-208ENST00000512392 PHLDB3Q6NSJ2 640 aa8.62□□□□□ -1.03
CHD1-208ENST00000512392 DNAJC2Q99543 621 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms