RNA–Protein interactions for RNA: ENST00000512028.5

SPDL1-211, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 4

Gene SPDL1, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-211ENST00000512028 HCSTQ9UBK5 93 aa13.15□□□□□ -0.3
SPDL1-211ENST00000512028 CFAP65Q6ZU64 1925 aaKnown RBP13.13□□□□□ -0.31
SPDL1-211ENST00000512028 ROBO1Q9Y6N7 1651 aa13.13□□□□□ -0.31
SPDL1-211ENST00000512028 CCNB3Q8WWL7 1395 aa13.13□□□□□ -0.31
SPDL1-211ENST00000512028 PPP1R3GB7ZBB8 358 aa13.13□□□□□ -0.31
SPDL1-211ENST00000512028 BHMG1C9JSJ3 638 aaPredicted RBP13.13□□□□□ -0.31
SPDL1-211ENST00000512028 RTEL1-TNFRSF6BF6WH68 1400 aa13.13□□□□□ -0.31
SPDL1-211ENST00000512028 ZNF644Q9H582 1327 aaPredicted RBP13.13□□□□□ -0.31
SPDL1-211ENST00000512028 SPDYE16A6NNV3 312 aaPredicted RBP13.12□□□□□ -0.31
SPDL1-211ENST00000512028 PDIA6Q15084 440 aa13.12□□□□□ -0.31
SPDL1-211ENST00000512028 MBD5Q9P267 1494 aa13.11□□□□□ -0.31
SPDL1-211ENST00000512028 ARIH1Q9Y4X5 557 aaPredicted RBP13.11□□□□□ -0.31
SPDL1-211ENST00000512028 UBR1Q8IWV7 1749 aa13.1□□□□□ -0.31
SPDL1-211ENST00000512028 FYCO1Q9BQS8 1478 aa13.1□□□□□ -0.31
SPDL1-211ENST00000512028 SCAF11Q99590 1463 aaKnown RBP13.09□□□□□ -0.31
SPDL1-211ENST00000512028 KCTD12Q96CX2 325 aaKnown RBP13.08□□□□□ -0.32
SPDL1-211ENST00000512028 LTKP29376 864 aa13.07□□□□□ -0.32
SPDL1-211ENST00000512028 TRIM52Q96A61 297 aa13.07□□□□□ -0.32
SPDL1-211ENST00000512028 PHLPP1O60346 1717 aa13.07□□□□□ -0.32
SPDL1-211ENST00000512028 COL9A1P20849 921 aa13.06□□□□□ -0.32
SPDL1-211ENST00000512028 C6orf132Q5T0Z8 1188 aa13.06□□□□□ -0.32
SPDL1-211ENST00000512028 TXNDC2Q86VQ3 553 aa13.06□□□□□ -0.32
SPDL1-211ENST00000512028 MRPL50Q8N5N7 158 aaKnown RBP13.06□□□□□ -0.32
SPDL1-211ENST00000512028 DDX12PQ92771 950 aa13.06□□□□□ -0.32
SPDL1-211ENST00000512028 NBPF3Q9H094 633 aa13.06□□□□□ -0.32
SPDL1-211ENST00000512028 TMEM94Q12767 1356 aa13.06□□□□□ -0.32
SPDL1-211ENST00000512028 JCADQ9P266 1359 aa13.05□□□□□ -0.32
SPDL1-211ENST00000512028 ERVK-7P63135 1459 aa13.04□□□□□ -0.32
SPDL1-211ENST00000512028 TIAM1Q13009 1591 aa13.04□□□□□ -0.32
SPDL1-211ENST00000512028 RABGEF1Q9UJ41 708 aa13.04□□□□□ -0.32
SPDL1-211ENST00000512028 NCOA2Q15596 1464 aa13.04□□□□□ -0.32
SPDL1-211ENST00000512028 ARHGAP23Q9P227 1491 aa13.04□□□□□ -0.32
SPDL1-211ENST00000512028 SLIT1O75093 1534 aa13.03□□□□□ -0.32
SPDL1-211ENST00000512028 RBM33Q96EV2 1170 aaKnown RBP13.03□□□□□ -0.32
SPDL1-211ENST00000512028 ABCC3O15438 1527 aa13.03□□□□□ -0.32
SPDL1-211ENST00000512028 GOLGA8CPA6NN73 597 aa13.02□□□□□ -0.33
SPDL1-211ENST00000512028 ONECUT3O60422 494 aaPredicted RBP13.02□□□□□ -0.33
SPDL1-211ENST00000512028 ZNF772Q68DY9 489 aaPredicted RBP13.02□□□□□ -0.33
SPDL1-211ENST00000512028 MTUS2Q5JR59 1369 aa13.02□□□□□ -0.33
SPDL1-211ENST00000512028 CCDC141Q6ZP82 1450 aa13.02□□□□□ -0.33
SPDL1-211ENST00000512028 LRRC9Q6ZRR7 1453 aa13.02□□□□□ -0.33
SPDL1-211ENST00000512028 MAP3K1Q13233 1512 aa13.02□□□□□ -0.33
SPDL1-211ENST00000512028 NBR1Q14596 966 aa13.01□□□□□ -0.33
SPDL1-211ENST00000512028 PROX2Q3B8N5 592 aa13.01□□□□□ -0.33
SPDL1-211ENST00000512028 PROSER2Q86WR7 435 aaPredicted RBP13.01□□□□□ -0.33
SPDL1-211ENST00000512028 EID1Q9Y6B2 187 aa13.01□□□□□ -0.33
SPDL1-211ENST00000512028 LRP6O75581 1613 aa13□□□□□ -0.33
SPDL1-211ENST00000512028 EN1Q05925 392 aaPredicted RBP13□□□□□ -0.33
SPDL1-211ENST00000512028 CEP152O94986 1710 aa12.99□□□□□ -0.33
SPDL1-211ENST00000512028 KCNA6P17658 529 aa12.99□□□□□ -0.33
SPDL1-211ENST00000512028 MEX3CQ5U5Q3 659 aaKnown RBP12.99□□□□□ -0.33
SPDL1-211ENST00000512028 TSHZ2Q9NRE2 1034 aa12.99□□□□□ -0.33
SPDL1-211ENST00000512028 SLAIN2Q9P270 581 aa12.99□□□□□ -0.33
SPDL1-211ENST00000512028 COL16A1Q07092 1604 aaPredicted RBP12.99□□□□□ -0.33
SPDL1-211ENST00000512028 RXRBP28702 533 aa12.98□□□□□ -0.33
SPDL1-211ENST00000512028 WNT2BQ93097 391 aa12.98□□□□□ -0.33
SPDL1-211ENST00000512028 SPATA31A6Q5VVP1 1343 aa12.97□□□□□ -0.33
SPDL1-211ENST00000512028 RSPH4AQ5TD94 716 aa12.97□□□□□ -0.33
SPDL1-211ENST00000512028 THSD4Q6ZMP0 1018 aa12.97□□□□□ -0.33
SPDL1-211ENST00000512028 PLA2G2EQ9NZK7 142 aa12.97□□□□□ -0.33
SPDL1-211ENST00000512028 PRDM15P57071 1507 aaPredicted RBP12.97□□□□□ -0.33
SPDL1-211ENST00000512028 MSH6P52701 1360 aa12.96□□□□□ -0.33
SPDL1-211ENST00000512028 CAMSAP2Q08AD1 1489 aa12.96□□□□□ -0.34
SPDL1-211ENST00000512028 PIK3C2BO00750 1634 aa12.95□□□□□ -0.34
SPDL1-211ENST00000512028 MAP3K7O43318 606 aa12.95□□□□□ -0.34
SPDL1-211ENST00000512028 LAPTM4BQ86VI4 370 aa12.95□□□□□ -0.34
SPDL1-211ENST00000512028 SLC26A8Q96RN1 970 aa12.95□□□□□ -0.34
SPDL1-211ENST00000512028 CDK12Q9NYV4 1490 aaPredicted RBP12.95□□□□□ -0.34
SPDL1-211ENST00000512028 MROH1Q8NDA8 1641 aa12.95□□□□□ -0.34
SPDL1-211ENST00000512028 TMEM2Q9UHN6 1383 aa12.94□□□□□ -0.34
SPDL1-211ENST00000512028 TRIM6-TRIM34B2RNG4 842 aa12.94□□□□□ -0.34
SPDL1-211ENST00000512028 TSPY4P0CV99 314 aa12.94□□□□□ -0.34
SPDL1-211ENST00000512028 TSPY10P0CW01 314 aa12.94□□□□□ -0.34
SPDL1-211ENST00000512028 PTPN5P54829 565 aa12.94□□□□□ -0.34
SPDL1-211ENST00000512028 KIAA1468Q9P260 1216 aa12.94□□□□□ -0.34
SPDL1-211ENST00000512028 FGD6Q6ZV73 1430 aa12.94□□□□□ -0.34
SPDL1-211ENST00000512028 EHBP1L1Q8N3D4 1523 aa12.93□□□□□ -0.34
SPDL1-211ENST00000512028 TET3O43151 1660 aa12.93□□□□□ -0.34
SPDL1-211ENST00000512028 SHPRHQ149N8 1683 aa12.93□□□□□ -0.34
SPDL1-211ENST00000512028 NKTRP30414 1462 aaKnown RBP12.93□□□□□ -0.34
SPDL1-211ENST00000512028 EIF2AK4Q9P2K8 1649 aaKnown RBP12.93□□□□□ -0.34
SPDL1-211ENST00000512028 GRXCR2A6NFK2 248 aa12.92□□□□□ -0.34
SPDL1-211ENST00000512028 ARHGEF5Q12774 1597 aa12.92□□□□□ -0.34
SPDL1-211ENST00000512028 NWD1Q149M9 1564 aa12.92□□□□□ -0.34
SPDL1-211ENST00000512028 TSR1Q2NL82 804 aaKnown RBP12.92□□□□□ -0.34
SPDL1-211ENST00000512028 CEP162Q5TB80 1403 aa12.92□□□□□ -0.34
SPDL1-211ENST00000512028 KDM5AP29375 1690 aaKnown RBP12.9□□□□□ -0.34
SPDL1-211ENST00000512028 ANKK1Q8NFD2 765 aa12.89□□□□□ -0.35
SPDL1-211ENST00000512028 ARHGEF1Q92888 912 aaKnown RBP12.89□□□□□ -0.35
SPDL1-211ENST00000512028 ARHGAP31Q2M1Z3 1444 aa12.88□□□□□ -0.35
SPDL1-211ENST00000512028 EFCAB6Q5THR3 1501 aa12.88□□□□□ -0.35
SPDL1-211ENST00000512028 CHD2O14647 1828 aaKnown RBP12.88□□□□□ -0.35
SPDL1-211ENST00000512028 NUTM2BA6NNL0 878 aaPredicted RBP12.88□□□□□ -0.35
SPDL1-211ENST00000512028 NUTM2EB1AL46 878 aaPredicted RBP12.88□□□□□ -0.35
SPDL1-211ENST00000512028 NUTM2AQ8IVF1 878 aaPredicted RBP12.88□□□□□ -0.35
SPDL1-211ENST00000512028 EP400Q96L91 3159 aa12.88□□□□□ -0.35
SPDL1-211ENST00000512028 AHDC1Q5TGY3 1603 aaPredicted RBP12.88□□□□□ -0.35
SPDL1-211ENST00000512028 AFF2P51816 1311 aa12.88□□□□□ -0.35
SPDL1-211ENST00000512028 MAST1Q9Y2H9 1570 aa12.87□□□□□ -0.35
SPDL1-211ENST00000512028 OSBPP22059 807 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms