RNA–Protein interactions for RNA: ENST00000511985.1

PDGFC-207, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-207ENST00000511985 BAP1Q92560 729 aa12.96□□□□□ -0.33
PDGFC-207ENST00000511985 ZNF787Q6DD87 383 aa12.95□□□□□ -0.34
PDGFC-207ENST00000511985 AVPP01185 164 aa12.94□□□□□ -0.34
PDGFC-207ENST00000511985 MAP10Q9P2G4 905 aa12.94□□□□□ -0.34
PDGFC-207ENST00000511985 EHBP1Q8NDI1 1231 aa12.93□□□□□ -0.34
PDGFC-207ENST00000511985 PLEKHG3A1L390 1219 aa12.92□□□□□ -0.34
PDGFC-207ENST00000511985 POTECB2RU33 542 aa12.92□□□□□ -0.34
PDGFC-207ENST00000511985 F12P00748 615 aaPredicted RBP12.92□□□□□ -0.34
PDGFC-207ENST00000511985 DDRGK1Q96HY6 314 aa12.91□□□□□ -0.34
PDGFC-207ENST00000511985 DACH1Q9UI36 760 aa12.91□□□□□ -0.34
PDGFC-207ENST00000511985 SIAH2O43255 324 aa12.9□□□□□ -0.34
PDGFC-207ENST00000511985 FBXO31Q5XUX0 539 aaPredicted RBP12.9□□□□□ -0.34
PDGFC-207ENST00000511985 ZNF511Q8NB15 262 aa12.9□□□□□ -0.34
PDGFC-207ENST00000511985 SKIV2LQ15477 1246 aaKnown RBP12.89□□□□□ -0.35
PDGFC-207ENST00000511985 PROCA1Q8NCQ7 364 aaPredicted RBP12.89□□□□□ -0.35
PDGFC-207ENST00000511985 AXIN1O15169 862 aa12.88□□□□□ -0.35
PDGFC-207ENST00000511985 ALDH1A1P00352 501 aa12.88□□□□□ -0.35
PDGFC-207ENST00000511985 SH3D19Q5HYK7 790 aa12.88□□□□□ -0.35
PDGFC-207ENST00000511985 CRIPAKQ8N1N5 446 aa12.88□□□□□ -0.35
PDGFC-207ENST00000511985 HPS1Q92902 700 aa12.88□□□□□ -0.35
PDGFC-207ENST00000511985 HELBQ8NG08 1087 aaPredicted RBP12.86□□□□□ -0.35
PDGFC-207ENST00000511985 ATP1B4Q9UN42 357 aaPredicted RBP12.86□□□□□ -0.35
PDGFC-207ENST00000511985 CTC1Q2NKJ3 1217 aa12.85□□□□□ -0.35
PDGFC-207ENST00000511985 SMCPP49901 116 aaPredicted RBP12.84□□□□□ -0.35
PDGFC-207ENST00000511985 NEUROD2Q15784 382 aa12.84□□□□□ -0.35
PDGFC-207ENST00000511985 TLL2Q9Y6L7 1015 aa12.84□□□□□ -0.35
PDGFC-207ENST00000511985 CTDSPL2Q05D32 466 aa12.83□□□□□ -0.36
PDGFC-207ENST00000511985 FOXJ1Q92949 421 aa12.83□□□□□ -0.36
PDGFC-207ENST00000511985 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.83□□□□□ -0.36
PDGFC-207ENST00000511985 VARSP26640 1264 aaKnown RBP12.8□□□□□ -0.36
PDGFC-207ENST00000511985 GMPR2Q9P2T1 348 aaKnown RBP12.79□□□□□ -0.36
PDGFC-207ENST00000511985 WASF2Q9Y6W5 498 aa12.79□□□□□ -0.36
PDGFC-207ENST00000511985 C4orf48Q5BLP8 95 aa12.78□□□□□ -0.36
PDGFC-207ENST00000511985 AGERQ15109 404 aa12.77□□□□□ -0.37
PDGFC-207ENST00000511985 IL27Q8NEV9 243 aa12.77□□□□□ -0.37
PDGFC-207ENST00000511985 LRRN4Q8WUT4 740 aa12.77□□□□□ -0.37
PDGFC-207ENST00000511985 PPP2R2DQ66LE6 453 aa12.76□□□□□ -0.37
PDGFC-207ENST00000511985 ZNF775Q96BV0 537 aaPredicted RBP12.76□□□□□ -0.37
PDGFC-207ENST00000511985 ATP13A2Q9NQ11 1180 aa12.75□□□□□ -0.37
PDGFC-207ENST00000511985 BRPF1P55201 1214 aaPredicted RBP12.74□□□□□ -0.37
PDGFC-207ENST00000511985 FAM174AQ8TBP5 190 aa12.74□□□□□ -0.37
PDGFC-207ENST00000511985 AP1G2O75843 785 aa12.73□□□□□ -0.37
PDGFC-207ENST00000511985 ARID5BQ14865 1188 aa12.72□□□□□ -0.37
PDGFC-207ENST00000511985 BPHLQ86WA6 291 aaPredicted RBP12.72□□□□□ -0.37
PDGFC-207ENST00000511985 MPNDQ8N594 471 aa12.72□□□□□ -0.37
PDGFC-207ENST00000511985 ARMC2Q8NEN0 867 aa12.72□□□□□ -0.37
PDGFC-207ENST00000511985 C11orf95C9JLR9 678 aaPredicted RBP12.71□□□□□ -0.37
PDGFC-207ENST00000511985 NNTQ13423 1086 aa12.7□□□□□ -0.38
PDGFC-207ENST00000511985 NR6A1Q15406 480 aa12.7□□□□□ -0.38
PDGFC-207ENST00000511985 NBPF14Q5TI25 921 aa12.7□□□□□ -0.38
PDGFC-207ENST00000511985 SH3RF1Q7Z6J0 888 aa12.69□□□□□ -0.38
PDGFC-207ENST00000511985 CAPN5O15484 640 aaPredicted RBP12.68□□□□□ -0.38
PDGFC-207ENST00000511985 SH3BP5LQ7L8J4 393 aa12.68□□□□□ -0.38
PDGFC-207ENST00000511985 CDK15Q96Q40 435 aa12.68□□□□□ -0.38
PDGFC-207ENST00000511985 MAGEB6P1A0A0J9YX57 407 aa12.67□□□□□ -0.38
PDGFC-207ENST00000511985 ADH1CP00326 375 aa12.67□□□□□ -0.38
PDGFC-207ENST00000511985 RFC5P40937 340 aa12.67□□□□□ -0.38
PDGFC-207ENST00000511985 PCMTD1Q96MG8 357 aaPredicted RBP12.67□□□□□ -0.38
PDGFC-207ENST00000511985 GOPCQ9HD26 462 aa12.67□□□□□ -0.38
PDGFC-207ENST00000511985 BMP1P13497 986 aa12.66□□□□□ -0.38
PDGFC-207ENST00000511985 EPS8L1Q8TE68 723 aa12.66□□□□□ -0.38
PDGFC-207ENST00000511985 CARD14Q9BXL6 1004 aa12.66□□□□□ -0.38
PDGFC-207ENST00000511985 SNRPBP14678 240 aaKnown RBP12.65□□□□□ -0.38
PDGFC-207ENST00000511985 C1QTNF2Q9BXJ5 285 aa12.65□□□□□ -0.38
PDGFC-207ENST00000511985 HMX1Q9NP08 348 aaPredicted RBP12.65□□□□□ -0.38
PDGFC-207ENST00000511985 FKBPLQ9UIM3 349 aa12.65□□□□□ -0.38
PDGFC-207ENST00000511985 USP17L8P0C7I0 530 aa12.64□□□□□ -0.39
PDGFC-207ENST00000511985 GRM5P41594 1212 aa12.63□□□□□ -0.39
PDGFC-207ENST00000511985 WDR4P57081 412 aaKnown RBP12.63□□□□□ -0.39
PDGFC-207ENST00000511985 TRIM46Q7Z4K8 759 aa12.63□□□□□ -0.39
PDGFC-207ENST00000511985 GPKOWQ92917 476 aaPredicted RBP eCLIP12.63□□□□□ -0.39
PDGFC-207ENST00000511985 NR3C2P08235 984 aa12.62□□□□□ -0.39
PDGFC-207ENST00000511985 TIMP2P16035 220 aa12.62□□□□□ -0.39
PDGFC-207ENST00000511985 TRIM47Q96LD4 638 aa12.62□□□□□ -0.39
PDGFC-207ENST00000511985 KLF16Q9BXK1 252 aaPredicted RBP12.61□□□□□ -0.39
PDGFC-207ENST00000511985 SENP2Q9HC62 589 aa12.61□□□□□ -0.39
PDGFC-207ENST00000511985 ERFEQ4G0M1 354 aa12.6□□□□□ -0.39
PDGFC-207ENST00000511985 PDXDC2PQ6P474 469 aa12.6□□□□□ -0.39
PDGFC-207ENST00000511985 NR5A1Q13285 461 aa12.59□□□□□ -0.39
PDGFC-207ENST00000511985 VASH1Q7L8A9 365 aaPredicted RBP12.59□□□□□ -0.39
PDGFC-207ENST00000511985 ARHGAP9Q9BRR9 750 aa12.59□□□□□ -0.39
PDGFC-207ENST00000511985 TRMT44Q8IYL2 757 aaKnown RBP12.58□□□□□ -0.4
PDGFC-207ENST00000511985 ZFAND3Q9H8U3 227 aa12.58□□□□□ -0.4
PDGFC-207ENST00000511985 FSHRP23945 695 aa12.57□□□□□ -0.4
PDGFC-207ENST00000511985 ITPKCQ96DU7 683 aa12.57□□□□□ -0.4
PDGFC-207ENST00000511985 OCSTAMPQ9BR26 566 aa12.57□□□□□ -0.4
PDGFC-207ENST00000511985 ZIC2O95409 532 aaPredicted RBP12.56□□□□□ -0.4
PDGFC-207ENST00000511985 KIFC2Q96AC6 838 aa12.56□□□□□ -0.4
PDGFC-207ENST00000511985 MAP4K5Q9Y4K4 846 aa12.56□□□□□ -0.4
PDGFC-207ENST00000511985 TMEM259Q4ZIN3 620 aa12.55□□□□□ -0.4
PDGFC-207ENST00000511985 ZC3H4Q9UPT8 1303 aaKnown RBP12.55□□□□□ -0.4
PDGFC-207ENST00000511985 ZBTB33Q86T24 672 aa12.54□□□□□ -0.4
PDGFC-207ENST00000511985 ZFP42Q96MM3 310 aa12.54□□□□□ -0.4
PDGFC-207ENST00000511985 MRPL14Q6P1L8 145 aaKnown RBP12.53□□□□□ -0.4
PDGFC-207ENST00000511985 TRIM34Q9BYJ4 488 aa12.53□□□□□ -0.4
PDGFC-207ENST00000511985 PTK2Q05397 1052 aa12.52□□□□□ -0.41
PDGFC-207ENST00000511985 PURBQ96QR8 312 aaKnown RBP12.52□□□□□ -0.41
PDGFC-207ENST00000511985 TREML4Q6UXN2 200 aa12.51□□□□□ -0.41
PDGFC-207ENST00000511985 ADAM32Q8TC27 787 aa12.51□□□□□ -0.41
PDGFC-207ENST00000511985 SLC10A4Q96EP9 437 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms