RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 TRPM1Q7Z4N2 1603 aa14.55□□□□□ -0.08
HOXA4-203ENST00000511914 KIF1AQ12756 1690 aa14.55□□□□□ -0.08
HOXA4-203ENST00000511914 HAX1O00165 279 aa14.54□□□□□ -0.08
HOXA4-203ENST00000511914 USP32Q8NFA0 1604 aa14.53□□□□□ -0.08
HOXA4-203ENST00000511914 GLI3P10071 1580 aa14.53□□□□□ -0.08
HOXA4-203ENST00000511914 LRPPRCP42704 1394 aaKnown RBP14.53□□□□□ -0.08
HOXA4-203ENST00000511914 GJD4Q96KN9 370 aaPredicted RBP14.53□□□□□ -0.08
HOXA4-203ENST00000511914 PLCH1Q4KWH8 1693 aa14.52□□□□□ -0.08
HOXA4-203ENST00000511914 TECPR2O15040 1411 aa14.52□□□□□ -0.08
HOXA4-203ENST00000511914 ZRANB1Q9UGI0 708 aa14.52□□□□□ -0.09
HOXA4-203ENST00000511914 KIAA1210Q9ULL0 1709 aa14.52□□□□□ -0.09
HOXA4-203ENST00000511914 ABCA3Q99758 1704 aa14.51□□□□□ -0.09
HOXA4-203ENST00000511914 SLC24A1O60721 1099 aa14.5□□□□□ -0.09
HOXA4-203ENST00000511914 PIK3C2GO75747 1445 aa14.49□□□□□ -0.09
HOXA4-203ENST00000511914 YTHDC2Q9H6S0 1430 aaKnown RBP14.49□□□□□ -0.09
HOXA4-203ENST00000511914 SPATA31A3Q5VYP0 1347 aa14.49□□□□□ -0.09
HOXA4-203ENST00000511914 SLIT2O94813 1529 aa14.49□□□□□ -0.09
HOXA4-203ENST00000511914 HAP1P54257 671 aaPredicted RBP14.48□□□□□ -0.09
HOXA4-203ENST00000511914 NBPF1Q3BBV0 1214 aa14.48□□□□□ -0.09
HOXA4-203ENST00000511914 KRT28Q7Z3Y7 464 aa14.48□□□□□ -0.09
HOXA4-203ENST00000511914 UNC5CLQ8IV45 518 aa14.48□□□□□ -0.09
HOXA4-203ENST00000511914 CABLES1Q8TDN4 633 aa14.48□□□□□ -0.09
HOXA4-203ENST00000511914 HIRIP3Q9BW71 556 aaPredicted RBP14.48□□□□□ -0.09
HOXA4-203ENST00000511914 ABCC11Q96J66 1382 aa14.47□□□□□ -0.09
HOXA4-203ENST00000511914 SAFB2Q14151 953 aaKnown RBP eCLIP14.47□□□□□ -0.09
HOXA4-203ENST00000511914 CCDC125Q86Z20 511 aa14.47□□□□□ -0.09
HOXA4-203ENST00000511914 C14orf93Q9H972 538 aaKnown RBP14.47□□□□□ -0.09
HOXA4-203ENST00000511914 CCDC7Q96M83 1385 aa14.47□□□□□ -0.09
HOXA4-203ENST00000511914 NWD2Q9ULI1 1742 aa14.46□□□□□ -0.09
HOXA4-203ENST00000511914 WASHC2AQ641Q2 1341 aa14.46□□□□□ -0.09
HOXA4-203ENST00000511914 LMOD2Q6P5Q4 547 aa14.46□□□□□ -0.09
HOXA4-203ENST00000511914 TNS3Q68CZ2 1445 aa14.46□□□□□ -0.09
HOXA4-203ENST00000511914 ATXN8OSP0DMR3 200 aa14.45□□□□□ -0.1
HOXA4-203ENST00000511914 DDX10Q13206 875 aaKnown RBP14.45□□□□□ -0.1
HOXA4-203ENST00000511914 DEFB132Q7Z7B7 95 aa14.45□□□□□ -0.1
HOXA4-203ENST00000511914 PHF8Q9UPP1 1060 aa14.45□□□□□ -0.1
HOXA4-203ENST00000511914 CCDC9Q9Y3X0 531 aaKnown RBP14.45□□□□□ -0.1
HOXA4-203ENST00000511914 BLMP54132 1417 aaPredicted RBP14.44□□□□□ -0.1
HOXA4-203ENST00000511914 ST20-MTHFSA0A0A6YYL1 179 aa14.44□□□□□ -0.1
HOXA4-203ENST00000511914 EIF3AQ14152 1382 aaKnown RBP14.44□□□□□ -0.1
HOXA4-203ENST00000511914 CFAP70Q5T0N1 1121 aa14.43□□□□□ -0.1
HOXA4-203ENST00000511914 SEPT12Q8IYM1 358 aa14.43□□□□□ -0.1
HOXA4-203ENST00000511914 NRAPQ86VF7 1730 aa14.42□□□□□ -0.1
HOXA4-203ENST00000511914 PSME1Q06323 249 aa14.42□□□□□ -0.1
HOXA4-203ENST00000511914 PMFBP1Q8TBY8 1022 aa14.42□□□□□ -0.1
HOXA4-203ENST00000511914 KIF7Q2M1P5 1343 aa14.41□□□□□ -0.1
HOXA4-203ENST00000511914 A0A0G2JS52 829 aa14.41□□□□□ -0.1
HOXA4-203ENST00000511914 C11orf95C9JLR9 678 aaPredicted RBP14.41□□□□□ -0.1
HOXA4-203ENST00000511914 MYT1Q01538 1121 aa14.41□□□□□ -0.1
HOXA4-203ENST00000511914 SF3B2Q13435 895 aaKnown RBP14.41□□□□□ -0.1
HOXA4-203ENST00000511914 PRAM1Q96QH2 718 aa14.41□□□□□ -0.1
HOXA4-203ENST00000511914 TRPM3Q9HCF6 1732 aaPredicted RBP14.41□□□□□ -0.1
HOXA4-203ENST00000511914 MIER1Q8N108 512 aa14.4□□□□□ -0.1
HOXA4-203ENST00000511914 TESK2Q96S53 571 aa14.4□□□□□ -0.1
HOXA4-203ENST00000511914 VPS72Q15906 364 aa14.39□□□□□ -0.11
HOXA4-203ENST00000511914 CDCA8Q53HL2 280 aa14.39□□□□□ -0.11
HOXA4-203ENST00000511914 SBNO1A3KN83 1393 aa14.38□□□□□ -0.11
HOXA4-203ENST00000511914 SBNO2Q9Y2G9 1366 aa14.38□□□□□ -0.11
HOXA4-203ENST00000511914 SPDYE2BA6NHP3 402 aa14.38□□□□□ -0.11
HOXA4-203ENST00000511914 SPDYE6P0CI01 402 aa14.38□□□□□ -0.11
HOXA4-203ENST00000511914 SPDYE2Q495Y8 402 aa14.38□□□□□ -0.11
HOXA4-203ENST00000511914 KRT27Q7Z3Y8 459 aa14.38□□□□□ -0.11
HOXA4-203ENST00000511914 SIRT1Q96EB6 747 aa14.38□□□□□ -0.11
HOXA4-203ENST00000511914 POGKQ9P215 609 aa14.38□□□□□ -0.11
HOXA4-203ENST00000511914 ALS2Q96Q42 1657 aa14.38□□□□□ -0.11
HOXA4-203ENST00000511914 ARHGEF10O15013 1369 aa14.37□□□□□ -0.11
HOXA4-203ENST00000511914 FAM83GA6ND36 823 aa14.37□□□□□ -0.11
HOXA4-203ENST00000511914 TMF1P82094 1093 aa14.37□□□□□ -0.11
HOXA4-203ENST00000511914 ADGRB2O60241 1585 aa14.37□□□□□ -0.11
HOXA4-203ENST00000511914 ADGRB1O14514 1584 aa14.36□□□□□ -0.11
HOXA4-203ENST00000511914 EVX2Q03828 476 aa14.36□□□□□ -0.11
HOXA4-203ENST00000511914 COL14A1Q05707 1796 aaKnown RBP14.36□□□□□ -0.11
HOXA4-203ENST00000511914 DLC1Q96QB1 1528 aa14.36□□□□□ -0.11
HOXA4-203ENST00000511914 CRYBG1Q9Y4K1 1723 aa14.35□□□□□ -0.11
HOXA4-203ENST00000511914 LRP5O75197 1615 aa14.35□□□□□ -0.11
HOXA4-203ENST00000511914 PSDA5PKW4 1024 aaPredicted RBP14.35□□□□□ -0.11
HOXA4-203ENST00000511914 FAM98CQ17RN3 349 aaKnown RBP14.35□□□□□ -0.11
HOXA4-203ENST00000511914 BTG4Q9NY30 223 aa14.35□□□□□ -0.11
HOXA4-203ENST00000511914 TRAK1Q9UPV9 953 aa14.35□□□□□ -0.11
HOXA4-203ENST00000511914 MINK1Q8N4C8 1332 aaPredicted RBP14.35□□□□□ -0.11
HOXA4-203ENST00000511914 RGPD1P0DJD0 1748 aa14.35□□□□□ -0.11
HOXA4-203ENST00000511914 ANP32CO43423 234 aa14.34□□□□□ -0.11
HOXA4-203ENST00000511914 FAM182BQ5T319 152 aa14.34□□□□□ -0.11
HOXA4-203ENST00000511914 ANKARQ7Z5J8 1434 aa14.33□□□□□ -0.11
HOXA4-203ENST00000511914 ONECUT3O60422 494 aaPredicted RBP14.33□□□□□ -0.12
HOXA4-203ENST00000511914 ITSN1Q15811 1721 aa14.32□□□□□ -0.12
HOXA4-203ENST00000511914 PUS7Q96PZ0 661 aaKnown RBP14.32□□□□□ -0.12
HOXA4-203ENST00000511914 TNS1Q9HBL0 1735 aaKnown RBP14.32□□□□□ -0.12
HOXA4-203ENST00000511914 TULP4Q9NRJ4 1543 aa14.31□□□□□ -0.12
HOXA4-203ENST00000511914 CCER2I3L3R5 266 aa14.31□□□□□ -0.12
HOXA4-203ENST00000511914 PAK3O75914 559 aaPredicted RBP14.31□□□□□ -0.12
HOXA4-203ENST00000511914 BAG6P46379 1132 aa14.31□□□□□ -0.12
HOXA4-203ENST00000511914 ARHGEF28Q8N1W1 1705 aaKnown RBP14.31□□□□□ -0.12
HOXA4-203ENST00000511914 PRR36Q9H6K5 1346 aa14.31□□□□□ -0.12
HOXA4-203ENST00000511914 CENPJQ9HC77 1338 aaPredicted RBP14.31□□□□□ -0.12
HOXA4-203ENST00000511914 EN1Q05925 392 aaPredicted RBP14.3□□□□□ -0.12
HOXA4-203ENST00000511914 PHRF1Q9P1Y6 1649 aaKnown RBP14.3□□□□□ -0.12
HOXA4-203ENST00000511914 THSD7AQ9UPZ6 1657 aa14.29□□□□□ -0.12
HOXA4-203ENST00000511914 NGDNQ8NEJ9 315 aaKnown RBP14.28□□□□□ -0.12
HOXA4-203ENST00000511914 WASLO00401 505 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms