RNA–Protein interactions for RNA: ENST00000511270.1

PROM1-212, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-212ENST00000511270 HCSTQ9UBK5 93 aa8.49□□□□□ -1.05
PROM1-212ENST00000511270 RAPGEF6Q8TEU7 1601 aa8.49□□□□□ -1.05
PROM1-212ENST00000511270 PHLDB1Q86UU1 1377 aa8.48□□□□□ -1.05
PROM1-212ENST00000511270 MORN1Q5T089 497 aa8.48□□□□□ -1.05
PROM1-212ENST00000511270 RIC3Q7Z5B4 369 aa8.48□□□□□ -1.05
PROM1-212ENST00000511270 CCDC18Q5T9S5 1454 aa8.47□□□□□ -1.05
PROM1-212ENST00000511270 SUPT6HQ7KZ85 1726 aaKnown RBP8.47□□□□□ -1.05
PROM1-212ENST00000511270 FDX1P10109 184 aa8.47□□□□□ -1.05
PROM1-212ENST00000511270 MMRN1Q13201 1228 aa8.47□□□□□ -1.05
PROM1-212ENST00000511270 PRPF38BQ5VTL8 546 aaKnown RBP8.47□□□□□ -1.05
PROM1-212ENST00000511270 SALL2Q9Y467 1007 aaPredicted RBP8.47□□□□□ -1.05
PROM1-212ENST00000511270 PCDHB3Q9Y5E6 796 aa8.47□□□□□ -1.05
PROM1-212ENST00000511270 EPRSP07814 1512 aaKnown RBP8.47□□□□□ -1.05
PROM1-212ENST00000511270 SHROOM2Q13796 1616 aa8.47□□□□□ -1.05
PROM1-212ENST00000511270 CCNB3Q8WWL7 1395 aa8.47□□□□□ -1.05
PROM1-212ENST00000511270 CDK13Q14004 1512 aaKnown RBP8.46□□□□□ -1.05
PROM1-212ENST00000511270 EHBP1L1Q8N3D4 1523 aa8.46□□□□□ -1.05
PROM1-212ENST00000511270 PTPN5P54829 565 aa8.46□□□□□ -1.06
PROM1-212ENST00000511270 LIMD1Q9UGP4 676 aa8.46□□□□□ -1.06
PROM1-212ENST00000511270 ARHGEF11O15085 1522 aa8.45□□□□□ -1.06
PROM1-212ENST00000511270 ZEB1P37275 1124 aaPredicted RBP8.45□□□□□ -1.06
PROM1-212ENST00000511270 PPP2R2DQ66LE6 453 aa8.45□□□□□ -1.06
PROM1-212ENST00000511270 POLR3EQ9NVU0 708 aa8.45□□□□□ -1.06
PROM1-212ENST00000511270 NUP153P49790 1475 aaKnown RBP8.45□□□□□ -1.06
PROM1-212ENST00000511270 NR1I2O75469 434 aa8.44□□□□□ -1.06
PROM1-212ENST00000511270 NDUFV2P19404 249 aa8.44□□□□□ -1.06
PROM1-212ENST00000511270 Q3C1V9 767 aa8.44□□□□□ -1.06
PROM1-212ENST00000511270 CARMIL2Q6F5E8 1435 aa8.44□□□□□ -1.06
PROM1-212ENST00000511270 NCOA2Q15596 1464 aa8.44□□□□□ -1.06
PROM1-212ENST00000511270 ABCA8O94911 1581 aa8.44□□□□□ -1.06
PROM1-212ENST00000511270 SPDYE5A6NIY4 337 aa8.43□□□□□ -1.06
PROM1-212ENST00000511270 HLA-CQ95604 372 aa8.43□□□□□ -1.06
PROM1-212ENST00000511270 ZBTB3Q9H5J0 574 aa8.43□□□□□ -1.06
PROM1-212ENST00000511270 PCDHGC3Q9UN70 934 aa8.43□□□□□ -1.06
PROM1-212ENST00000511270 SLC27A5Q9Y2P5 690 aa8.43□□□□□ -1.06
PROM1-212ENST00000511270 MTUS2Q5JR59 1369 aa8.43□□□□□ -1.06
PROM1-212ENST00000511270 CLASP1Q7Z460 1538 aa8.43□□□□□ -1.06
PROM1-212ENST00000511270 LILRB3O75022 631 aa8.42□□□□□ -1.06
PROM1-212ENST00000511270 PUS10Q3MIT2 529 aaKnown RBP8.42□□□□□ -1.06
PROM1-212ENST00000511270 PROCA1Q8NCQ7 364 aaPredicted RBP8.42□□□□□ -1.06
PROM1-212ENST00000511270 CCER1Q8TC90 406 aaPredicted RBP8.42□□□□□ -1.06
PROM1-212ENST00000511270 PLB1Q6P1J6 1458 aa8.42□□□□□ -1.06
PROM1-212ENST00000511270 ERCC6L2Q5T890 1561 aa8.41□□□□□ -1.06
PROM1-212ENST00000511270 PRG4Q92954 1404 aaPredicted RBP8.41□□□□□ -1.06
PROM1-212ENST00000511270 GUCA2AQ02747 115 aa8.41□□□□□ -1.06
PROM1-212ENST00000511270 MTMR2Q13614 643 aa8.41□□□□□ -1.06
PROM1-212ENST00000511270 BLOC1S3Q6QNY0 202 aa8.41□□□□□ -1.06
PROM1-212ENST00000511270 SCUBE3Q8IX30 993 aa8.41□□□□□ -1.06
PROM1-212ENST00000511270 THAP11Q96EK4 314 aa8.41□□□□□ -1.06
PROM1-212ENST00000511270 MTRQ99707 1265 aa8.41□□□□□ -1.06
PROM1-212ENST00000511270 FGD6Q6ZV73 1430 aa8.4□□□□□ -1.06
PROM1-212ENST00000511270 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.4□□□□□ -1.06
PROM1-212ENST00000511270 ITGBL1O95965 494 aaPredicted RBP8.4□□□□□ -1.06
PROM1-212ENST00000511270 TJAP1Q5JTD0 557 aa8.4□□□□□ -1.06
PROM1-212ENST00000511270 BRICD5Q6PL45 260 aa8.4□□□□□ -1.06
PROM1-212ENST00000511270 IL21Q9HBE4 155 aa8.4□□□□□ -1.06
PROM1-212ENST00000511270 PCDHB15Q9Y5E8 787 aa8.4□□□□□ -1.06
PROM1-212ENST00000511270 PTPN23Q9H3S7 1636 aa8.4□□□□□ -1.07
PROM1-212ENST00000511270 MYOM3Q5VTT5 1437 aa8.39□□□□□ -1.07
PROM1-212ENST00000511270 ARID3CA6NKF2 412 aa8.39□□□□□ -1.07
PROM1-212ENST00000511270 ZPR1O75312 459 aa8.39□□□□□ -1.07
PROM1-212ENST00000511270 QPCTQ16769 361 aa8.39□□□□□ -1.07
PROM1-212ENST00000511270 RETREG3Q86VR2 466 aa8.39□□□□□ -1.07
PROM1-212ENST00000511270 ADCY10Q96PN6 1610 aa8.39□□□□□ -1.07
PROM1-212ENST00000511270 FMNL1O95466 1100 aaPredicted RBP8.38□□□□□ -1.07
PROM1-212ENST00000511270 ITGAEP38570 1179 aa8.38□□□□□ -1.07
PROM1-212ENST00000511270 COPS2P61201 443 aa8.37□□□□□ -1.07
PROM1-212ENST00000511270 FAM50AQ14320 339 aaKnown RBP8.37□□□□□ -1.07
PROM1-212ENST00000511270 DESI1Q6ICB0 168 aa8.37□□□□□ -1.07
PROM1-212ENST00000511270 RNF19BQ6ZMZ0 732 aa8.37□□□□□ -1.07
PROM1-212ENST00000511270 ATP10BO94823 1461 aa8.37□□□□□ -1.07
PROM1-212ENST00000511270 TCOF1Q13428 1488 aaKnown RBP8.37□□□□□ -1.07
PROM1-212ENST00000511270 KIF14Q15058 1648 aa8.36□□□□□ -1.07
PROM1-212ENST00000511270 C6orf229H3BNL8 230 aa8.36□□□□□ -1.07
PROM1-212ENST00000511270 SOCS7O14512 581 aa8.36□□□□□ -1.07
PROM1-212ENST00000511270 RFC5P40937 340 aa8.36□□□□□ -1.07
PROM1-212ENST00000511270 CSPP1Q1MSJ5 1256 aa8.36□□□□□ -1.07
PROM1-212ENST00000511270 MSS51Q4VC12 460 aa8.36□□□□□ -1.07
PROM1-212ENST00000511270 TMEM259Q4ZIN3 620 aa8.36□□□□□ -1.07
PROM1-212ENST00000511270 USB1Q9BQ65 265 aaKnown RBP8.36□□□□□ -1.07
PROM1-212ENST00000511270 PTPRGP23470 1445 aa8.36□□□□□ -1.07
PROM1-212ENST00000511270 PTPRKQ15262 1439 aa8.36□□□□□ -1.07
PROM1-212ENST00000511270 DHX57Q6P158 1386 aaKnown RBP8.35□□□□□ -1.07
PROM1-212ENST00000511270 NUTM2BA6NNL0 878 aaPredicted RBP8.35□□□□□ -1.07
PROM1-212ENST00000511270 NUTM2EB1AL46 878 aaPredicted RBP8.35□□□□□ -1.07
PROM1-212ENST00000511270 NUTM2DQ5VT03 806 aaPredicted RBP8.35□□□□□ -1.07
PROM1-212ENST00000511270 FBXO31Q5XUX0 539 aaPredicted RBP8.35□□□□□ -1.07
PROM1-212ENST00000511270 NUTM2AQ8IVF1 878 aaPredicted RBP8.35□□□□□ -1.07
PROM1-212ENST00000511270 BANK1Q8NDB2 785 aa8.35□□□□□ -1.07
PROM1-212ENST00000511270 CABLES1Q8TDN4 633 aa8.35□□□□□ -1.07
PROM1-212ENST00000511270 TROQ12816 1431 aaPredicted RBP8.35□□□□□ -1.07
PROM1-212ENST00000511270 CDC42BPAQ5VT25 1732 aa8.34□□□□□ -1.07
PROM1-212ENST00000511270 ADH1BP00325 375 aa8.34□□□□□ -1.07
PROM1-212ENST00000511270 IFFO2Q5TF58 517 aa8.34□□□□□ -1.07
PROM1-212ENST00000511270 SPSB2Q99619 263 aa8.34□□□□□ -1.07
PROM1-212ENST00000511270 MIA2Q96PC5 1412 aa8.34□□□□□ -1.07
PROM1-212ENST00000511270 SETD5Q9C0A6 1442 aa8.34□□□□□ -1.07
PROM1-212ENST00000511270 RAB3GAP2Q9H2M9 1393 aa8.34□□□□□ -1.07
PROM1-212ENST00000511270 ITSN2Q9NZM3 1697 aa8.34□□□□□ -1.08
PROM1-212ENST00000511270 KCNC4Q03721 635 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms