RNA–Protein interactions for RNA: ENST00000511023.1

COL12A1-210, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-210ENST00000511023 RBM6P78332 1123 aaKnown RBP20.71■□□□□ 0.91
COL12A1-210ENST00000511023 SLIT2O94813 1529 aa20.71■□□□□ 0.91
COL12A1-210ENST00000511023 EVC2Q86UK5 1308 aa20.71■□□□□ 0.91
COL12A1-210ENST00000511023 CRYBG1Q9Y4K1 1723 aa20.7■□□□□ 0.9
COL12A1-210ENST00000511023 HAP1P54257 671 aaPredicted RBP20.7■□□□□ 0.9
COL12A1-210ENST00000511023 CABP1Q9NZU7 370 aa20.69■□□□□ 0.9
COL12A1-210ENST00000511023 TRPC5Q9UL62 973 aaPredicted RBP20.69■□□□□ 0.9
COL12A1-210ENST00000511023 RGS12O14924 1447 aa20.69■□□□□ 0.9
COL12A1-210ENST00000511023 SBNO2Q9Y2G9 1366 aa20.68■□□□□ 0.9
COL12A1-210ENST00000511023 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.67■□□□□ 0.9
COL12A1-210ENST00000511023 FAM83GA6ND36 823 aa20.66■□□□□ 0.9
COL12A1-210ENST00000511023 CLSPNQ9HAW4 1339 aa20.66■□□□□ 0.9
COL12A1-210ENST00000511023 PLCH1Q4KWH8 1693 aa20.65■□□□□ 0.9
COL12A1-210ENST00000511023 NUTM2GQ5VZR2 741 aa20.65■□□□□ 0.9
COL12A1-210ENST00000511023 UNC5CLQ8IV45 518 aa20.65■□□□□ 0.9
COL12A1-210ENST00000511023 PHRF1Q9P1Y6 1649 aaKnown RBP20.63■□□□□ 0.89
COL12A1-210ENST00000511023 USP6P35125 1406 aa20.62■□□□□ 0.89
COL12A1-210ENST00000511023 NWD2Q9ULI1 1742 aa20.62■□□□□ 0.89
COL12A1-210ENST00000511023 SSH2Q76I76 1423 aa20.61■□□□□ 0.89
COL12A1-210ENST00000511023 GLI3P10071 1580 aa20.61■□□□□ 0.89
COL12A1-210ENST00000511023 GJD4Q96KN9 370 aaPredicted RBP20.61■□□□□ 0.89
COL12A1-210ENST00000511023 ATAD2Q6PL18 1390 aa20.6■□□□□ 0.89
COL12A1-210ENST00000511023 ABTB2Q8N961 1025 aa20.6■□□□□ 0.89
COL12A1-210ENST00000511023 BRD4O60885 1362 aaPredicted RBP20.59■□□□□ 0.89
COL12A1-210ENST00000511023 COL14A1Q05707 1796 aaKnown RBP20.59■□□□□ 0.89
COL12A1-210ENST00000511023 NRAPQ86VF7 1730 aa20.59■□□□□ 0.89
COL12A1-210ENST00000511023 ST20-MTHFSA0A0A6YYL1 179 aa20.59■□□□□ 0.89
COL12A1-210ENST00000511023 TESK2Q96S53 571 aa20.59■□□□□ 0.89
COL12A1-210ENST00000511023 TIMELESSQ9UNS1 1208 aa20.59■□□□□ 0.89
COL12A1-210ENST00000511023 USP19O94966 1318 aa20.58■□□□□ 0.89
COL12A1-210ENST00000511023 AKAP12Q02952 1782 aa20.58■□□□□ 0.89
COL12A1-210ENST00000511023 KIAA0232Q92628 1395 aa20.58■□□□□ 0.88
COL12A1-210ENST00000511023 CPSF1Q10570 1443 aaKnown RBP20.57■□□□□ 0.88
COL12A1-210ENST00000511023 VPS72Q15906 364 aa20.57■□□□□ 0.88
COL12A1-210ENST00000511023 NRKQ7Z2Y5 1582 aa20.57■□□□□ 0.88
COL12A1-210ENST00000511023 BTG4Q9NY30 223 aa20.57■□□□□ 0.88
COL12A1-210ENST00000511023 UPF1Q92900 1129 aaKnown RBP eCLIP20.56■□□□□ 0.88
COL12A1-210ENST00000511023 PRDM11Q9NQV5 511 aa20.56■□□□□ 0.88
COL12A1-210ENST00000511023 PIK3C2AO00443 1686 aa20.55■□□□□ 0.88
COL12A1-210ENST00000511023 ZC3H6P61129 1189 aaKnown RBP20.55■□□□□ 0.88
COL12A1-210ENST00000511023 CCER1Q8TC90 406 aaPredicted RBP20.55■□□□□ 0.88
COL12A1-210ENST00000511023 CD163L1Q9NR16 1453 aa20.55■□□□□ 0.88
COL12A1-210ENST00000511023 CHRNA2Q15822 529 aa20.54■□□□□ 0.88
COL12A1-210ENST00000511023 NLRP13Q86W25 1043 aa20.54■□□□□ 0.88
COL12A1-210ENST00000511023 ZNF692Q9BU19 519 aaPredicted RBP20.54■□□□□ 0.88
COL12A1-210ENST00000511023 USP47Q96K76 1375 aa20.54■□□□□ 0.88
COL12A1-210ENST00000511023 TTC21BQ7Z4L5 1316 aa20.53■□□□□ 0.88
COL12A1-210ENST00000511023 EP400Q96L91 3159 aa20.53■□□□□ 0.88
COL12A1-210ENST00000511023 SLC12A5Q9H2X9 1139 aa20.52■□□□□ 0.88
COL12A1-210ENST00000511023 MON2Q7Z3U7 1717 aa20.52■□□□□ 0.88
COL12A1-210ENST00000511023 CPDO75976 1380 aa20.51■□□□□ 0.87
COL12A1-210ENST00000511023 KTN1Q86UP2 1357 aaKnown RBP20.51■□□□□ 0.87
COL12A1-210ENST00000511023 GCP02774 474 aa20.51■□□□□ 0.87
COL12A1-210ENST00000511023 NLRP6P59044 892 aa20.51■□□□□ 0.87
COL12A1-210ENST00000511023 PUS7Q96PZ0 661 aaKnown RBP20.51■□□□□ 0.87
COL12A1-210ENST00000511023 SLIT3O75094 1523 aa20.51■□□□□ 0.87
COL12A1-210ENST00000511023 TMC1Q8TDI8 760 aa20.5■□□□□ 0.87
COL12A1-210ENST00000511023 CCDC9Q9Y3X0 531 aaKnown RBP20.5■□□□□ 0.87
COL12A1-210ENST00000511023 ONECUT3O60422 494 aaPredicted RBP20.49■□□□□ 0.87
COL12A1-210ENST00000511023 LMO7Q8WWI1 1683 aa20.48■□□□□ 0.87
COL12A1-210ENST00000511023 TTC21AQ8NDW8 1320 aa20.48■□□□□ 0.87
COL12A1-210ENST00000511023 CAMTA1Q9Y6Y1 1673 aa20.48■□□□□ 0.87
COL12A1-210ENST00000511023 SEPT12Q8IYM1 358 aa20.47■□□□□ 0.87
COL12A1-210ENST00000511023 BRWD3Q6RI45 1802 aa20.47■□□□□ 0.87
COL12A1-210ENST00000511023 SPATA31A5Q5VU36 1347 aa20.47■□□□□ 0.87
COL12A1-210ENST00000511023 SPATA31A7Q8IWB4 1347 aa20.47■□□□□ 0.87
COL12A1-210ENST00000511023 A0A1W2PP64 1363 aa20.46■□□□□ 0.87
COL12A1-210ENST00000511023 ZRANB1Q9UGI0 708 aa20.45■□□□□ 0.86
COL12A1-210ENST00000511023 SLC24A1O60721 1099 aa20.44■□□□□ 0.86
COL12A1-210ENST00000511023 FAM98CQ17RN3 349 aaKnown RBP20.44■□□□□ 0.86
COL12A1-210ENST00000511023 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.44■□□□□ 0.86
COL12A1-210ENST00000511023 STRN4Q9NRL3 753 aa20.44■□□□□ 0.86
COL12A1-210ENST00000511023 HDGFL2Q7Z4V5 671 aaPredicted RBP20.43■□□□□ 0.86
COL12A1-210ENST00000511023 TMF1P82094 1093 aa20.42■□□□□ 0.86
COL12A1-210ENST00000511023 NME9Q86XW9 330 aa20.42■□□□□ 0.86
COL12A1-210ENST00000511023 TERF2IPQ9NYB0 399 aa20.42■□□□□ 0.86
COL12A1-210ENST00000511023 SPATA31A1Q5TZJ5 1347 aa20.42■□□□□ 0.86
COL12A1-210ENST00000511023 EDC4Q6P2E9 1401 aaKnown RBP20.42■□□□□ 0.86
COL12A1-210ENST00000511023 AATKQ6ZMQ8 1374 aa20.41■□□□□ 0.86
COL12A1-210ENST00000511023 USP31Q70CQ4 1352 aa20.41■□□□□ 0.86
COL12A1-210ENST00000511023 NINLQ9Y2I6 1382 aa20.41■□□□□ 0.86
COL12A1-210ENST00000511023 NFAT5O94916 1531 aa20.41■□□□□ 0.86
COL12A1-210ENST00000511023 USP54Q70EL1 1684 aa20.41■□□□□ 0.86
COL12A1-210ENST00000511023 COL18A1P39060 1754 aa20.41■□□□□ 0.86
COL12A1-210ENST00000511023 ZBTB7CA1YPR0 619 aa20.4■□□□□ 0.86
COL12A1-210ENST00000511023 COL5A2P05997 1499 aaPredicted RBP20.4■□□□□ 0.86
COL12A1-210ENST00000511023 LARP1Q6PKG0 1096 aaKnown RBP20.4■□□□□ 0.86
COL12A1-210ENST00000511023 THSD7AQ9UPZ6 1657 aa20.4■□□□□ 0.86
COL12A1-210ENST00000511023 SOX12O15370 315 aa20.39■□□□□ 0.85
COL12A1-210ENST00000511023 EVA1CP58658 441 aa20.39■□□□□ 0.85
COL12A1-210ENST00000511023 ARHGEF25Q86VW2 580 aa20.39■□□□□ 0.85
COL12A1-210ENST00000511023 KCNH5Q8NCM2 988 aa20.38■□□□□ 0.85
COL12A1-210ENST00000511023 AXIN2Q9Y2T1 843 aa20.38■□□□□ 0.85
COL12A1-210ENST00000511023 A0A0G2JS52 829 aa20.37■□□□□ 0.85
COL12A1-210ENST00000511023 MYT1Q01538 1121 aa20.37■□□□□ 0.85
COL12A1-210ENST00000511023 KRT27Q7Z3Y8 459 aa20.37■□□□□ 0.85
COL12A1-210ENST00000511023 ANKRD36BQ8N2N9 1353 aa20.35■□□□□ 0.85
COL12A1-210ENST00000511023 USP35Q9P2H5 1018 aa20.35■□□□□ 0.85
COL12A1-210ENST00000511023 OVOS2A0A0J9YW53 1432 aa20.35■□□□□ 0.85
COL12A1-210ENST00000511023 OVOS2Q6IE36 1432 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms