RNA–Protein interactions for RNA: ENST00000510948.1

SMAD1-208, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-208ENST00000510948 EIF4G2P78344 907 aaKnown RBP eCLIP7.5□□□□□ -1.21
SMAD1-208ENST00000510948 PCDHB3Q9Y5E6 796 aa7.5□□□□□ -1.21
SMAD1-208ENST00000510948 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.49□□□□□ -1.21
SMAD1-208ENST00000510948 AEBP1Q8IUX7 1158 aa7.49□□□□□ -1.21
SMAD1-208ENST00000510948 WNT2BQ93097 391 aa7.49□□□□□ -1.21
SMAD1-208ENST00000510948 TFIP11Q9UBB9 837 aaKnown RBP7.49□□□□□ -1.21
SMAD1-208ENST00000510948 JUNDP17535 347 aa7.48□□□□□ -1.21
SMAD1-208ENST00000510948 LMOD1P29536 600 aaPredicted RBP7.48□□□□□ -1.21
SMAD1-208ENST00000510948 NR1H3Q13133 447 aa7.48□□□□□ -1.21
SMAD1-208ENST00000510948 FKBPLQ9UIM3 349 aa7.48□□□□□ -1.21
SMAD1-208ENST00000510948 F12P00748 615 aaPredicted RBP7.47□□□□□ -1.21
SMAD1-208ENST00000510948 PTPRNQ16849 979 aa7.47□□□□□ -1.21
SMAD1-208ENST00000510948 UCN2Q96RP3 112 aa7.47□□□□□ -1.21
SMAD1-208ENST00000510948 ZBBXA8MT70 800 aa7.46□□□□□ -1.22
SMAD1-208ENST00000510948 ZC3H4Q9UPT8 1303 aaKnown RBP7.46□□□□□ -1.22
SMAD1-208ENST00000510948 FBXO45P0C2W1 286 aa7.45□□□□□ -1.22
SMAD1-208ENST00000510948 CSB-PGBD3P0DP91 1061 aa7.45□□□□□ -1.22
SMAD1-208ENST00000510948 WBP1LQ9NX94 342 aa7.45□□□□□ -1.22
SMAD1-208ENST00000510948 CTHP32929 405 aa7.44□□□□□ -1.22
SMAD1-208ENST00000510948 MSS51Q4VC12 460 aa7.44□□□□□ -1.22
SMAD1-208ENST00000510948 TBC1D9Q6ZT07 1266 aa7.44□□□□□ -1.22
SMAD1-208ENST00000510948 SPSB2Q99619 263 aa7.44□□□□□ -1.22
SMAD1-208ENST00000510948 EVA1BQ9NVM1 165 aa7.44□□□□□ -1.22
SMAD1-208ENST00000510948 MAP10Q9P2G4 905 aa7.44□□□□□ -1.22
SMAD1-208ENST00000510948 USTQ9Y2C2 406 aa7.44□□□□□ -1.22
SMAD1-208ENST00000510948 CCDC9Q9Y3X0 531 aaKnown RBP7.44□□□□□ -1.22
SMAD1-208ENST00000510948 MAFBQ9Y5Q3 323 aaPredicted RBP7.44□□□□□ -1.22
SMAD1-208ENST00000510948 SHROOM4Q9ULL8 1493 aa7.43□□□□□ -1.22
SMAD1-208ENST00000510948 ATP9BO43861 1147 aa7.43□□□□□ -1.22
SMAD1-208ENST00000510948 FAM160A2Q8N612 972 aaPredicted RBP7.43□□□□□ -1.22
SMAD1-208ENST00000510948 DXOO77932 396 aaKnown RBP7.42□□□□□ -1.22
SMAD1-208ENST00000510948 CCNYL3P0C7X3 344 aa7.42□□□□□ -1.22
SMAD1-208ENST00000510948 MMP16P51512 607 aa7.42□□□□□ -1.22
SMAD1-208ENST00000510948 ARMC2Q8NEN0 867 aa7.42□□□□□ -1.22
SMAD1-208ENST00000510948 GPSM3Q9Y4H4 160 aa7.42□□□□□ -1.22
SMAD1-208ENST00000510948 ATG7O95352 703 aa7.41□□□□□ -1.22
SMAD1-208ENST00000510948 PTK2Q05397 1052 aa7.41□□□□□ -1.22
SMAD1-208ENST00000510948 KCNH2Q12809 1159 aa7.41□□□□□ -1.22
SMAD1-208ENST00000510948 CDCA8Q53HL2 280 aa7.41□□□□□ -1.22
SMAD1-208ENST00000510948 PDXDC2PQ6P474 469 aa7.41□□□□□ -1.22
SMAD1-208ENST00000510948 NUDT12Q9BQG2 462 aa7.41□□□□□ -1.22
SMAD1-208ENST00000510948 BRD1O95696 1058 aa7.4□□□□□ -1.22
SMAD1-208ENST00000510948 COPS2P61201 443 aa7.4□□□□□ -1.22
SMAD1-208ENST00000510948 NYAP1Q6ZVC0 841 aa7.4□□□□□ -1.22
SMAD1-208ENST00000510948 NFATC2IPQ8NCF5 419 aa7.4□□□□□ -1.22
SMAD1-208ENST00000510948 GPKOWQ92917 476 aaPredicted RBP eCLIP7.4□□□□□ -1.22
SMAD1-208ENST00000510948 VRTNQ9H8Y1 702 aa7.4□□□□□ -1.22
SMAD1-208ENST00000510948 PATL2C9JE40 543 aaKnown RBP7.39□□□□□ -1.23
SMAD1-208ENST00000510948 MCCD1P59942 119 aaPredicted RBP7.39□□□□□ -1.23
SMAD1-208ENST00000510948 KANK4Q5T7N3 995 aaPredicted RBP7.39□□□□□ -1.23
SMAD1-208ENST00000510948 THSD4Q6ZMP0 1018 aa7.39□□□□□ -1.23
SMAD1-208ENST00000510948 ZNF592Q92610 1267 aa7.39□□□□□ -1.23
SMAD1-208ENST00000510948 PIK3CDO00329 1044 aa7.38□□□□□ -1.23
SMAD1-208ENST00000510948 GZF1Q9H116 711 aaPredicted RBP7.38□□□□□ -1.23
SMAD1-208ENST00000510948 ZPR1O75312 459 aa7.37□□□□□ -1.23
SMAD1-208ENST00000510948 SKIP12755 728 aa7.37□□□□□ -1.23
SMAD1-208ENST00000510948 NBPF14Q5TI25 921 aa7.37□□□□□ -1.23
SMAD1-208ENST00000510948 PRDM9Q9NQV7 894 aa7.37□□□□□ -1.23
SMAD1-208ENST00000510948 CEP126Q9P2H0 1117 aa7.37□□□□□ -1.23
SMAD1-208ENST00000510948 CARNS1A5YM72 827 aa7.36□□□□□ -1.23
SMAD1-208ENST00000510948 ADH1BP00325 375 aa7.36□□□□□ -1.23
SMAD1-208ENST00000510948 KCNA1Q09470 495 aa7.36□□□□□ -1.23
SMAD1-208ENST00000510948 PLEKHM2Q8IWE5 1019 aa7.36□□□□□ -1.23
SMAD1-208ENST00000510948 KCTD12Q96CX2 325 aaKnown RBP7.36□□□□□ -1.23
SMAD1-208ENST00000510948 OCSTAMPQ9BR26 566 aa7.36□□□□□ -1.23
SMAD1-208ENST00000510948 BICRAQ9NZM4 1560 aa7.36□□□□□ -1.23
SMAD1-208ENST00000510948 TMEM88BA6NKF7 163 aa7.35□□□□□ -1.23
SMAD1-208ENST00000510948 ELOAQ14241 798 aaKnown RBP7.35□□□□□ -1.23
SMAD1-208ENST00000510948 SLFNL1Q499Z3 407 aa7.35□□□□□ -1.23
SMAD1-208ENST00000510948 PHTF2Q8N3S3 785 aa7.35□□□□□ -1.23
SMAD1-208ENST00000510948 KRTAP3-3Q9BYR6 98 aa7.35□□□□□ -1.23
SMAD1-208ENST00000510948 KRTAP3-2Q9BYR7 98 aa7.35□□□□□ -1.23
SMAD1-208ENST00000510948 USP17L3A6NCW0 530 aa7.34□□□□□ -1.23
SMAD1-208ENST00000510948 USP17L4A6NCW7 530 aa7.34□□□□□ -1.23
SMAD1-208ENST00000510948 USP17L5A8MUK1 530 aa7.34□□□□□ -1.23
SMAD1-208ENST00000510948 PTCRAQ6ISU1 281 aaPredicted RBP7.34□□□□□ -1.23
SMAD1-208ENST00000510948 USP17L2Q6R6M4 530 aa7.34□□□□□ -1.23
SMAD1-208ENST00000510948 USP17L1Q7RTZ2 530 aa7.34□□□□□ -1.23
SMAD1-208ENST00000510948 NPM2Q86SE8 214 aaKnown RBP7.34□□□□□ -1.23
SMAD1-208ENST00000510948 SPNS2Q8IVW8 549 aa7.34□□□□□ -1.23
SMAD1-208ENST00000510948 CCDC24Q8N4L8 307 aa7.34□□□□□ -1.23
SMAD1-208ENST00000510948 FAM174AQ8TBP5 190 aa7.34□□□□□ -1.23
SMAD1-208ENST00000510948 ADAM32Q8TC27 787 aa7.34□□□□□ -1.23
SMAD1-208ENST00000510948 MTRQ99707 1265 aa7.34□□□□□ -1.23
SMAD1-208ENST00000510948 ARHGAP9Q9BRR9 750 aa7.34□□□□□ -1.23
SMAD1-208ENST00000510948 UNC93B1Q9H1C4 597 aa7.34□□□□□ -1.23
SMAD1-208ENST00000510948 PCDHB9Q9Y5E1 797 aa7.34□□□□□ -1.23
SMAD1-208ENST00000510948 TLL1O43897 1013 aa7.33□□□□□ -1.24
SMAD1-208ENST00000510948 LZTS3O60299 673 aaPredicted RBP7.33□□□□□ -1.24
SMAD1-208ENST00000510948 TMCO4Q5TGY1 634 aa7.33□□□□□ -1.24
SMAD1-208ENST00000510948 ZBTB33Q86T24 672 aa7.33□□□□□ -1.24
SMAD1-208ENST00000510948 MYT1LQ9UL68 1186 aa7.33□□□□□ -1.24
SMAD1-208ENST00000510948 TJAP1Q5JTD0 557 aa7.32□□□□□ -1.24
SMAD1-208ENST00000510948 SH3BP5LQ7L8J4 393 aa7.32□□□□□ -1.24
SMAD1-208ENST00000510948 RNF135Q8IUD6 432 aa7.32□□□□□ -1.24
SMAD1-208ENST00000510948 DEPDC4Q8N2C3 294 aa7.32□□□□□ -1.24
SMAD1-208ENST00000510948 SLC6A16Q9GZN6 736 aa7.32□□□□□ -1.24
SMAD1-208ENST00000510948 IL21Q9HBE4 155 aa7.32□□□□□ -1.24
SMAD1-208ENST00000510948 MKRN1Q9UHC7 482 aaKnown RBP7.32□□□□□ -1.24
SMAD1-208ENST00000510948 RANGAP1P46060 587 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms