RNA–Protein interactions for RNA: ENST00000510783.5

RFC1-212, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 723 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-212ENST00000510783 PER1O15534 1290 aaPredicted RBP11.49□□□□□ -0.57
RFC1-212ENST00000510783 AVPP01185 164 aa11.49□□□□□ -0.57
RFC1-212ENST00000510783 EHBP1Q8NDI1 1231 aa11.48□□□□□ -0.57
RFC1-212ENST00000510783 DDRGK1Q96HY6 314 aa11.48□□□□□ -0.57
RFC1-212ENST00000510783 MAP10Q9P2G4 905 aa11.48□□□□□ -0.57
RFC1-212ENST00000510783 PLEKHG3A1L390 1219 aa11.46□□□□□ -0.57
RFC1-212ENST00000510783 F12P00748 615 aaPredicted RBP11.46□□□□□ -0.57
RFC1-212ENST00000510783 SKIV2LQ15477 1246 aaKnown RBP11.46□□□□□ -0.57
RFC1-212ENST00000510783 SIAH2O43255 324 aa11.45□□□□□ -0.58
RFC1-212ENST00000510783 CRIPAKQ8N1N5 446 aa11.45□□□□□ -0.58
RFC1-212ENST00000510783 ZNF511Q8NB15 262 aa11.45□□□□□ -0.58
RFC1-212ENST00000510783 POTECB2RU33 542 aa11.44□□□□□ -0.58
RFC1-212ENST00000510783 AXIN1O15169 862 aa11.44□□□□□ -0.58
RFC1-212ENST00000510783 ALDH1A1P00352 501 aa11.44□□□□□ -0.58
RFC1-212ENST00000510783 SH3D19Q5HYK7 790 aa11.44□□□□□ -0.58
RFC1-212ENST00000510783 HELBQ8NG08 1087 aaPredicted RBP11.44□□□□□ -0.58
RFC1-212ENST00000510783 DACH1Q9UI36 760 aa11.44□□□□□ -0.58
RFC1-212ENST00000510783 CTC1Q2NKJ3 1217 aa11.43□□□□□ -0.58
RFC1-212ENST00000510783 PROCA1Q8NCQ7 364 aaPredicted RBP11.43□□□□□ -0.58
RFC1-212ENST00000510783 ATP1B4Q9UN42 357 aaPredicted RBP11.43□□□□□ -0.58
RFC1-212ENST00000510783 FBXO31Q5XUX0 539 aaPredicted RBP11.42□□□□□ -0.58
RFC1-212ENST00000510783 HPS1Q92902 700 aa11.42□□□□□ -0.58
RFC1-212ENST00000510783 SMCPP49901 116 aaPredicted RBP11.41□□□□□ -0.58
RFC1-212ENST00000510783 NEUROD2Q15784 382 aa11.4□□□□□ -0.58
RFC1-212ENST00000510783 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.4□□□□□ -0.58
RFC1-212ENST00000510783 CTDSPL2Q05D32 466 aa11.39□□□□□ -0.59
RFC1-212ENST00000510783 VARSP26640 1264 aaKnown RBP11.38□□□□□ -0.59
RFC1-212ENST00000510783 FOXJ1Q92949 421 aa11.38□□□□□ -0.59
RFC1-212ENST00000510783 TLL2Q9Y6L7 1015 aa11.37□□□□□ -0.59
RFC1-212ENST00000510783 WASF2Q9Y6W5 498 aa11.37□□□□□ -0.59
RFC1-212ENST00000510783 TPRNQ4KMQ1 711 aa11.36□□□□□ -0.59
RFC1-212ENST00000510783 GMPR2Q9P2T1 348 aaKnown RBP11.35□□□□□ -0.59
RFC1-212ENST00000510783 AGERQ15109 404 aa11.34□□□□□ -0.59
RFC1-212ENST00000510783 PPP2R2DQ66LE6 453 aa11.34□□□□□ -0.59
RFC1-212ENST00000510783 C4orf48Q5BLP8 95 aa11.33□□□□□ -0.6
RFC1-212ENST00000510783 IL27Q8NEV9 243 aa11.33□□□□□ -0.6
RFC1-212ENST00000510783 LRRN4Q8WUT4 740 aa11.33□□□□□ -0.6
RFC1-212ENST00000510783 ARMC2Q8NEN0 867 aa11.32□□□□□ -0.6
RFC1-212ENST00000510783 FAM174AQ8TBP5 190 aa11.32□□□□□ -0.6
RFC1-212ENST00000510783 ATP13A2Q9NQ11 1180 aa11.32□□□□□ -0.6
RFC1-212ENST00000510783 BRPF1P55201 1214 aaPredicted RBP11.31□□□□□ -0.6
RFC1-212ENST00000510783 BPHLQ86WA6 291 aaPredicted RBP11.31□□□□□ -0.6
RFC1-212ENST00000510783 MPNDQ8N594 471 aa11.31□□□□□ -0.6
RFC1-212ENST00000510783 ZNF775Q96BV0 537 aaPredicted RBP11.31□□□□□ -0.6
RFC1-212ENST00000510783 AP1G2O75843 785 aa11.3□□□□□ -0.6
RFC1-212ENST00000510783 ARID5BQ14865 1188 aa11.29□□□□□ -0.6
RFC1-212ENST00000510783 NBPF14Q5TI25 921 aa11.29□□□□□ -0.6
RFC1-212ENST00000510783 C11orf95C9JLR9 678 aaPredicted RBP11.28□□□□□ -0.6
RFC1-212ENST00000510783 NNTQ13423 1086 aa11.27□□□□□ -0.61
RFC1-212ENST00000510783 NR6A1Q15406 480 aa11.27□□□□□ -0.61
RFC1-212ENST00000510783 SH3RF1Q7Z6J0 888 aa11.27□□□□□ -0.61
RFC1-212ENST00000510783 PCMTD1Q96MG8 357 aaPredicted RBP11.27□□□□□ -0.61
RFC1-212ENST00000510783 CDK15Q96Q40 435 aa11.27□□□□□ -0.61
RFC1-212ENST00000510783 GOPCQ9HD26 462 aa11.27□□□□□ -0.61
RFC1-212ENST00000510783 CAPN5O15484 640 aaPredicted RBP11.26□□□□□ -0.61
RFC1-212ENST00000510783 SH3BP5LQ7L8J4 393 aa11.26□□□□□ -0.61
RFC1-212ENST00000510783 ABCC9O60706 1549 aa11.25□□□□□ -0.61
RFC1-212ENST00000510783 MAGEB6P1A0A0J9YX57 407 aa11.25□□□□□ -0.61
RFC1-212ENST00000510783 ADH1CP00326 375 aa11.25□□□□□ -0.61
RFC1-212ENST00000510783 RFC5P40937 340 aa11.25□□□□□ -0.61
RFC1-212ENST00000510783 GPKOWQ92917 476 aaPredicted RBP eCLIP11.23□□□□□ -0.61
RFC1-212ENST00000510783 C1QTNF2Q9BXJ5 285 aa11.23□□□□□ -0.61
RFC1-212ENST00000510783 CARD14Q9BXL6 1004 aa11.23□□□□□ -0.61
RFC1-212ENST00000510783 FKBPLQ9UIM3 349 aa11.23□□□□□ -0.61
RFC1-212ENST00000510783 USP17L8P0C7I0 530 aa11.22□□□□□ -0.61
RFC1-212ENST00000510783 BMP1P13497 986 aa11.22□□□□□ -0.61
RFC1-212ENST00000510783 GRM5P41594 1212 aa11.22□□□□□ -0.61
RFC1-212ENST00000510783 EPS8L1Q8TE68 723 aa11.22□□□□□ -0.61
RFC1-212ENST00000510783 SNRPBP14678 240 aaKnown RBP11.21□□□□□ -0.61
RFC1-212ENST00000510783 WDR4P57081 412 aaKnown RBP11.21□□□□□ -0.61
RFC1-212ENST00000510783 TRIM46Q7Z4K8 759 aa11.21□□□□□ -0.61
RFC1-212ENST00000510783 TRIM47Q96LD4 638 aa11.21□□□□□ -0.61
RFC1-212ENST00000510783 SENP2Q9HC62 589 aa11.21□□□□□ -0.61
RFC1-212ENST00000510783 HMX1Q9NP08 348 aaPredicted RBP11.21□□□□□ -0.61
RFC1-212ENST00000510783 TIMP2P16035 220 aa11.2□□□□□ -0.62
RFC1-212ENST00000510783 PDXDC2PQ6P474 469 aa11.2□□□□□ -0.62
RFC1-212ENST00000510783 NR5A1Q13285 461 aa11.19□□□□□ -0.62
RFC1-212ENST00000510783 KLF16Q9BXK1 252 aaPredicted RBP11.19□□□□□ -0.62
RFC1-212ENST00000510783 NR3C2P08235 984 aa11.18□□□□□ -0.62
RFC1-212ENST00000510783 ERFEQ4G0M1 354 aa11.18□□□□□ -0.62
RFC1-212ENST00000510783 VASH1Q7L8A9 365 aaPredicted RBP11.18□□□□□ -0.62
RFC1-212ENST00000510783 TRMT44Q8IYL2 757 aaKnown RBP11.18□□□□□ -0.62
RFC1-212ENST00000510783 ARHGAP9Q9BRR9 750 aa11.18□□□□□ -0.62
RFC1-212ENST00000510783 KIFC2Q96AC6 838 aa11.17□□□□□ -0.62
RFC1-212ENST00000510783 ZC3H4Q9UPT8 1303 aaKnown RBP11.16□□□□□ -0.62
RFC1-212ENST00000510783 FSHRP23945 695 aa11.16□□□□□ -0.62
RFC1-212ENST00000510783 TMEM259Q4ZIN3 620 aa11.16□□□□□ -0.62
RFC1-212ENST00000510783 MAP4K5Q9Y4K4 846 aa11.16□□□□□ -0.62
RFC1-212ENST00000510783 ZIC2O95409 532 aaPredicted RBP11.15□□□□□ -0.62
RFC1-212ENST00000510783 ZBTB33Q86T24 672 aa11.15□□□□□ -0.62
RFC1-212ENST00000510783 ITPKCQ96DU7 683 aa11.15□□□□□ -0.62
RFC1-212ENST00000510783 ZFAND3Q9H8U3 227 aa11.15□□□□□ -0.62
RFC1-212ENST00000510783 OCSTAMPQ9BR26 566 aa11.14□□□□□ -0.63
RFC1-212ENST00000510783 PTK2Q05397 1052 aa11.13□□□□□ -0.63
RFC1-212ENST00000510783 ZFP42Q96MM3 310 aa11.13□□□□□ -0.63
RFC1-212ENST00000510783 MRPL14Q6P1L8 145 aaKnown RBP11.12□□□□□ -0.63
RFC1-212ENST00000510783 TRIM34Q9BYJ4 488 aa11.12□□□□□ -0.63
RFC1-212ENST00000510783 PRKCSHP14314 528 aaPredicted RBP11.11□□□□□ -0.63
RFC1-212ENST00000510783 PNMA1Q8ND90 353 aa11.11□□□□□ -0.63
RFC1-212ENST00000510783 SLC10A4Q96EP9 437 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms