RNA–Protein interactions for RNA: ENST00000510771.1

GYPA-207, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 3

Gene GYPA, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-207ENST00000510771 LIMD1Q9UGP4 676 aa12.95□□□□□ -0.34
GYPA-207ENST00000510771 VARSP26640 1264 aaKnown RBP12.94□□□□□ -0.34
GYPA-207ENST00000510771 ATP13A2Q9NQ11 1180 aa12.94□□□□□ -0.34
GYPA-207ENST00000510771 WASF2Q9Y6W5 498 aa12.94□□□□□ -0.34
GYPA-207ENST00000510771 NUTM2BA6NNL0 878 aaPredicted RBP12.93□□□□□ -0.34
GYPA-207ENST00000510771 NUTM2EB1AL46 878 aaPredicted RBP12.93□□□□□ -0.34
GYPA-207ENST00000510771 NUTM2DQ5VT03 806 aaPredicted RBP12.93□□□□□ -0.34
GYPA-207ENST00000510771 NUTM2AQ8IVF1 878 aaPredicted RBP12.93□□□□□ -0.34
GYPA-207ENST00000510771 F12P00748 615 aaPredicted RBP12.92□□□□□ -0.34
GYPA-207ENST00000510771 SENP2Q9HC62 589 aa12.92□□□□□ -0.34
GYPA-207ENST00000510771 LILRB3O75022 631 aa12.91□□□□□ -0.34
GYPA-207ENST00000510771 CLK2P49760 499 aaKnown RBP12.91□□□□□ -0.34
GYPA-207ENST00000510771 PLEKHG3A1L390 1219 aa12.9□□□□□ -0.34
GYPA-207ENST00000510771 QPCTQ16769 361 aa12.9□□□□□ -0.34
GYPA-207ENST00000510771 MPNDQ8N594 471 aa12.9□□□□□ -0.34
GYPA-207ENST00000510771 HELBQ8NG08 1087 aaPredicted RBP12.89□□□□□ -0.35
GYPA-207ENST00000510771 TSC1Q92574 1164 aa12.89□□□□□ -0.35
GYPA-207ENST00000510771 MAP10Q9P2G4 905 aa12.89□□□□□ -0.35
GYPA-207ENST00000510771 KIFC2Q96AC6 838 aa12.87□□□□□ -0.35
GYPA-207ENST00000510771 FAM174AQ8TBP5 190 aa12.86□□□□□ -0.35
GYPA-207ENST00000510771 TRIM47Q96LD4 638 aa12.86□□□□□ -0.35
GYPA-207ENST00000510771 TLL2Q9Y6L7 1015 aa12.86□□□□□ -0.35
GYPA-207ENST00000510771 PER1O15534 1290 aaPredicted RBP12.85□□□□□ -0.35
GYPA-207ENST00000510771 ARMC2Q8NEN0 867 aa12.85□□□□□ -0.35
GYPA-207ENST00000510771 CAPN5O15484 640 aaPredicted RBP12.83□□□□□ -0.36
GYPA-207ENST00000510771 TREML4Q6UXN2 200 aa12.83□□□□□ -0.36
GYPA-207ENST00000510771 POLR3EQ9NVU0 708 aa12.83□□□□□ -0.36
GYPA-207ENST00000510771 DDRGK1Q96HY6 314 aa12.82□□□□□ -0.36
GYPA-207ENST00000510771 RTL5Q5HYW3 569 aaPredicted RBP12.81□□□□□ -0.36
GYPA-207ENST00000510771 BPHLQ86WA6 291 aaPredicted RBP12.81□□□□□ -0.36
GYPA-207ENST00000510771 AGERQ15109 404 aa12.8□□□□□ -0.36
GYPA-207ENST00000510771 NBPF14Q5TI25 921 aa12.8□□□□□ -0.36
GYPA-207ENST00000510771 FOXJ1Q92949 421 aa12.8□□□□□ -0.36
GYPA-207ENST00000510771 KDM4CQ9H3R0 1056 aa12.8□□□□□ -0.36
GYPA-207ENST00000510771 SNRPBP14678 240 aaKnown RBP12.79□□□□□ -0.36
GYPA-207ENST00000510771 NNTQ13423 1086 aa12.79□□□□□ -0.36
GYPA-207ENST00000510771 ADH1CP00326 375 aa12.78□□□□□ -0.36
GYPA-207ENST00000510771 SKIV2LQ15477 1246 aaKnown RBP12.78□□□□□ -0.36
GYPA-207ENST00000510771 SH3D19Q5HYK7 790 aa12.78□□□□□ -0.36
GYPA-207ENST00000510771 CDK15Q96Q40 435 aa12.78□□□□□ -0.36
GYPA-207ENST00000510771 GPBP1L1Q9HC44 474 aaPredicted RBP12.77□□□□□ -0.37
GYPA-207ENST00000510771 WFS1O76024 890 aa12.75□□□□□ -0.37
GYPA-207ENST00000510771 BMP1P13497 986 aa12.75□□□□□ -0.37
GYPA-207ENST00000510771 LCE2AQ5TA79 106 aaPredicted RBP12.75□□□□□ -0.37
GYPA-207ENST00000510771 GPKOWQ92917 476 aaPredicted RBP eCLIP12.75□□□□□ -0.37
GYPA-207ENST00000510771 ARID5BQ14865 1188 aa12.74□□□□□ -0.37
GYPA-207ENST00000510771 TRIM46Q7Z4K8 759 aa12.74□□□□□ -0.37
GYPA-207ENST00000510771 NR5A1Q13285 461 aa12.73□□□□□ -0.37
GYPA-207ENST00000510771 C4orf48Q5BLP8 95 aa12.73□□□□□ -0.37
GYPA-207ENST00000510771 FAM117AQ9C073 453 aa12.73□□□□□ -0.37
GYPA-207ENST00000510771 WDR4P57081 412 aaKnown RBP12.72□□□□□ -0.37
GYPA-207ENST00000510771 TIMP2P16035 220 aa12.71□□□□□ -0.37
GYPA-207ENST00000510771 NFX1Q12986 1120 aaKnown RBP12.71□□□□□ -0.37
GYPA-207ENST00000510771 SH3RF1Q7Z6J0 888 aa12.71□□□□□ -0.37
GYPA-207ENST00000510771 C1QTNF2Q9BXJ5 285 aa12.71□□□□□ -0.37
GYPA-207ENST00000510771 ATP1B4Q9UN42 357 aaPredicted RBP12.71□□□□□ -0.37
GYPA-207ENST00000510771 CTDSPL2Q05D32 466 aa12.7□□□□□ -0.38
GYPA-207ENST00000510771 SH3BP5LQ7L8J4 393 aa12.7□□□□□ -0.38
GYPA-207ENST00000510771 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.7□□□□□ -0.38
GYPA-207ENST00000510771 TERTO14746 1132 aaKnown RBP12.69□□□□□ -0.38
GYPA-207ENST00000510771 PPP2R2DQ66LE6 453 aa12.69□□□□□ -0.38
GYPA-207ENST00000510771 SCARF1Q14162 830 aa12.68□□□□□ -0.38
GYPA-207ENST00000510771 TRMT44Q8IYL2 757 aaKnown RBP12.68□□□□□ -0.38
GYPA-207ENST00000510771 KLF16Q9BXK1 252 aaPredicted RBP12.68□□□□□ -0.38
GYPA-207ENST00000510771 MAP4K5Q9Y4K4 846 aa12.68□□□□□ -0.38
GYPA-207ENST00000510771 MRPL14Q6P1L8 145 aaKnown RBP12.67□□□□□ -0.38
GYPA-207ENST00000510771 MAGEB6P1A0A0J9YX57 407 aa12.66□□□□□ -0.38
GYPA-207ENST00000510771 PROCA1Q8NCQ7 364 aaPredicted RBP12.66□□□□□ -0.38
GYPA-207ENST00000510771 ZFP42Q96MM3 310 aa12.66□□□□□ -0.38
GYPA-207ENST00000510771 ZC3H4Q9UPT8 1303 aaKnown RBP12.65□□□□□ -0.38
GYPA-207ENST00000510771 GRM5P41594 1212 aa12.65□□□□□ -0.38
GYPA-207ENST00000510771 ZIC2O95409 532 aaPredicted RBP12.64□□□□□ -0.39
GYPA-207ENST00000510771 NR3C2P08235 984 aa12.64□□□□□ -0.39
GYPA-207ENST00000510771 PDXDC2PQ6P474 469 aa12.64□□□□□ -0.39
GYPA-207ENST00000510771 VASH1Q7L8A9 365 aaPredicted RBP12.64□□□□□ -0.39
GYPA-207ENST00000510771 LRRN4Q8WUT4 740 aa12.64□□□□□ -0.39
GYPA-207ENST00000510771 FKBPLQ9UIM3 349 aa12.64□□□□□ -0.39
GYPA-207ENST00000510771 FSHRP23945 695 aa12.62□□□□□ -0.39
GYPA-207ENST00000510771 NPAS3Q8IXF0 933 aa12.62□□□□□ -0.39
GYPA-207ENST00000510771 SLC16A10Q8TF71 515 aa12.62□□□□□ -0.39
GYPA-207ENST00000510771 ITPKCQ96DU7 683 aa12.62□□□□□ -0.39
GYPA-207ENST00000510771 CARD14Q9BXL6 1004 aa12.62□□□□□ -0.39
GYPA-207ENST00000510771 NXF1Q9UBU9 619 aaKnown RBP12.62□□□□□ -0.39
GYPA-207ENST00000510771 WIPF1O43516 503 aa12.61□□□□□ -0.39
GYPA-207ENST00000510771 ZFAND3Q9H8U3 227 aa12.61□□□□□ -0.39
GYPA-207ENST00000510771 AP1G2O75843 785 aa12.6□□□□□ -0.39
GYPA-207ENST00000510771 ERFEQ4G0M1 354 aa12.6□□□□□ -0.39
GYPA-207ENST00000510771 PNMA1Q8ND90 353 aa12.6□□□□□ -0.39
GYPA-207ENST00000510771 PURBQ96QR8 312 aaKnown RBP12.6□□□□□ -0.39
GYPA-207ENST00000510771 ARHGAP9Q9BRR9 750 aa12.6□□□□□ -0.39
GYPA-207ENST00000510771 CDV3Q9UKY7 258 aaKnown RBP12.6□□□□□ -0.39
GYPA-207ENST00000510771 FBXO31Q5XUX0 539 aaPredicted RBP12.59□□□□□ -0.39
GYPA-207ENST00000510771 GOPCQ9HD26 462 aa12.59□□□□□ -0.39
GYPA-207ENST00000510771 EMILIN1Q9Y6C2 1016 aa12.59□□□□□ -0.39
GYPA-207ENST00000510771 UPP2O95045 317 aa12.58□□□□□ -0.4
GYPA-207ENST00000510771 NR6A1Q15406 480 aa12.58□□□□□ -0.4
GYPA-207ENST00000510771 CCDC116Q8IYX3 515 aa12.57□□□□□ -0.4
GYPA-207ENST00000510771 SLC10A4Q96EP9 437 aa12.57□□□□□ -0.4
GYPA-207ENST00000510771 GPSM3Q9Y4H4 160 aa12.57□□□□□ -0.4
GYPA-207ENST00000510771 INSM1Q01101 510 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms