RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 K7ELQ4 463 aaPredicted RBP9.92□□□□□ -0.82
HTT-208ENST00000510626 C9orf78Q9NZ63 289 aaPredicted RBP9.92□□□□□ -0.82
HTT-208ENST00000510626 VPS37CA5D8V6 355 aaPredicted RBP9.92□□□□□ -0.82
HTT-208ENST00000510626 SMTNL1A8MU46 457 aa9.92□□□□□ -0.82
HTT-208ENST00000510626 TTLL5Q6EMB2 1281 aa9.92□□□□□ -0.82
HTT-208ENST00000510626 GIMAP7Q8NHV1 300 aa9.92□□□□□ -0.82
HTT-208ENST00000510626 LRRCC1Q9C099 1032 aa9.92□□□□□ -0.82
HTT-208ENST00000510626 CCDC83Q8IWF9 413 aa9.92□□□□□ -0.82
HTT-208ENST00000510626 GSDMDP57764 484 aa9.92□□□□□ -0.82
HTT-208ENST00000510626 UBXN4Q92575 508 aa9.92□□□□□ -0.82
HTT-208ENST00000510626 DNAAF4Q8WXU2 420 aa9.92□□□□□ -0.82
HTT-208ENST00000510626 ZMYM3Q14202 1370 aa9.92□□□□□ -0.82
HTT-208ENST00000510626 SENP3-EIF4A1A0A087X0R7 540 aa9.92□□□□□ -0.82
HTT-208ENST00000510626 NOL8Q76FK4 1167 aaKnown RBP9.92□□□□□ -0.82
HTT-208ENST00000510626 RALYLQ86SE5 291 aaKnown RBP9.92□□□□□ -0.82
HTT-208ENST00000510626 BCL11BQ9C0K0 894 aaPredicted RBP9.92□□□□□ -0.82
HTT-208ENST00000510626 GNAI3P08754 354 aa9.91□□□□□ -0.82
HTT-208ENST00000510626 OFD1O75665 1012 aa9.91□□□□□ -0.82
HTT-208ENST00000510626 SLC4A3P48751 1232 aa9.91□□□□□ -0.82
HTT-208ENST00000510626 CHMP3Q9Y3E7 222 aa9.91□□□□□ -0.82
HTT-208ENST00000510626 TCEAL9Q9UHQ7 104 aa9.91□□□□□ -0.82
HTT-208ENST00000510626 IMMTQ16891 758 aaKnown RBP9.91□□□□□ -0.82
HTT-208ENST00000510626 LMOD2Q6P5Q4 547 aa9.91□□□□□ -0.82
HTT-208ENST00000510626 FEZ1Q99689 392 aa9.91□□□□□ -0.82
HTT-208ENST00000510626 AMPHP49418 695 aa9.9□□□□□ -0.82
HTT-208ENST00000510626 SHTN1A0MZ66 631 aa9.9□□□□□ -0.82
HTT-208ENST00000510626 KAT6BQ8WYB5 2073 aa9.9□□□□□ -0.82
HTT-208ENST00000510626 CT47A1Q5JQC4 288 aaPredicted RBP9.9□□□□□ -0.82
HTT-208ENST00000510626 FILIP1Q7Z7B0 1213 aa9.9□□□□□ -0.82
HTT-208ENST00000510626 TOMM22Q9NS69 142 aa9.9□□□□□ -0.82
HTT-208ENST00000510626 TNMDQ9H2S6 317 aa9.9□□□□□ -0.82
HTT-208ENST00000510626 PLIN1O60240 522 aa9.9□□□□□ -0.82
HTT-208ENST00000510626 CDKL5O76039 1030 aa9.9□□□□□ -0.82
HTT-208ENST00000510626 CLCN1P35523 988 aa9.9□□□□□ -0.82
HTT-208ENST00000510626 FRAT2O75474 233 aaPredicted RBP9.9□□□□□ -0.83
HTT-208ENST00000510626 UVSSAQ2YD98 709 aa9.9□□□□□ -0.83
HTT-208ENST00000510626 TMCO3Q6UWJ1 677 aa9.89□□□□□ -0.83
HTT-208ENST00000510626 SH2B1Q9NRF2 756 aaPredicted RBP9.89□□□□□ -0.83
HTT-208ENST00000510626 SETSIPP0DME0 302 aa9.89□□□□□ -0.83
HTT-208ENST00000510626 PPP6R1Q9UPN7 881 aa9.89□□□□□ -0.83
HTT-208ENST00000510626 HFM1A2PYH4 1435 aa9.89□□□□□ -0.83
HTT-208ENST00000510626 DIAPH1O60610 1272 aaKnown RBP9.89□□□□□ -0.83
HTT-208ENST00000510626 KRT32Q14532 448 aa9.89□□□□□ -0.83
HTT-208ENST00000510626 ODF2Q5BJF6 829 aa9.89□□□□□ -0.83
HTT-208ENST00000510626 NF2P35240 595 aa9.89□□□□□ -0.83
HTT-208ENST00000510626 KRT85P78386 507 aa9.89□□□□□ -0.83
HTT-208ENST00000510626 ZSCAN12O43309 604 aa9.89□□□□□ -0.83
HTT-208ENST00000510626 CCDC148Q8NFR7 591 aa9.89□□□□□ -0.83
HTT-208ENST00000510626 APAF1O14727 1248 aa9.88□□□□□ -0.83
HTT-208ENST00000510626 C1orf141Q5JVX7 400 aa9.88□□□□□ -0.83
HTT-208ENST00000510626 FYCO1Q9BQS8 1478 aa9.88□□□□□ -0.83
HTT-208ENST00000510626 MAP3K1Q13233 1512 aa9.88□□□□□ -0.83
HTT-208ENST00000510626 NFXL1Q6ZNB6 911 aa9.88□□□□□ -0.83
HTT-208ENST00000510626 EID1Q9Y6B2 187 aa9.88□□□□□ -0.83
HTT-208ENST00000510626 SCAND2PQ9GZW5 306 aaPredicted RBP9.88□□□□□ -0.83
HTT-208ENST00000510626 FGD6Q6ZV73 1430 aa9.88□□□□□ -0.83
HTT-208ENST00000510626 TIGD1Q96MW7 591 aa9.88□□□□□ -0.83
HTT-208ENST00000510626 RBM25P49756 843 aaKnown RBP9.88□□□□□ -0.83
HTT-208ENST00000510626 KIAA1328Q86T90 577 aa9.88□□□□□ -0.83
HTT-208ENST00000510626 FOXD1Q16676 465 aa9.88□□□□□ -0.83
HTT-208ENST00000510626 CCDC183Q5T5S1 534 aa9.88□□□□□ -0.83
HTT-208ENST00000510626 DDX12PQ92771 950 aa9.88□□□□□ -0.83
HTT-208ENST00000510626 PRM3Q9NNZ6 103 aa9.88□□□□□ -0.83
HTT-208ENST00000510626 PATL2C9JE40 543 aaKnown RBP9.87□□□□□ -0.83
HTT-208ENST00000510626 EHBP1Q8NDI1 1231 aa9.87□□□□□ -0.83
HTT-208ENST00000510626 SLC3A2P08195 630 aaKnown RBP9.87□□□□□ -0.83
HTT-208ENST00000510626 SFPQP23246 707 aaKnown RBP eCLIP9.87□□□□□ -0.83
HTT-208ENST00000510626 RIPK4P57078 832 aa9.87□□□□□ -0.83
HTT-208ENST00000510626 ERCC6Q03468 1493 aa9.87□□□□□ -0.83
HTT-208ENST00000510626 HSP90AB2PQ58FF8 381 aa9.87□□□□□ -0.83
HTT-208ENST00000510626 HSP90AB3PQ58FF7 597 aa9.87□□□□□ -0.83
HTT-208ENST00000510626 PDILTQ8N807 584 aa9.87□□□□□ -0.83
HTT-208ENST00000510626 CYP46A1Q9Y6A2 500 aa9.87□□□□□ -0.83
HTT-208ENST00000510626 PRPF40AO75400 957 aaKnown RBP9.86□□□□□ -0.83
HTT-208ENST00000510626 PLEKHG5O94827 1062 aa9.86□□□□□ -0.83
HTT-208ENST00000510626 CCT4P50991 539 aaKnown RBP9.86□□□□□ -0.83
HTT-208ENST00000510626 NEK4P51957 841 aa9.86□□□□□ -0.83
HTT-208ENST00000510626 WASF1Q92558 559 aa9.86□□□□□ -0.83
HTT-208ENST00000510626 VPS53Q5VIR6 699 aa9.86□□□□□ -0.83
HTT-208ENST00000510626 SMAP1Q8IYB5 467 aaPredicted RBP9.86□□□□□ -0.83
HTT-208ENST00000510626 CRACR2AQ9BSW2 395 aa9.86□□□□□ -0.83
HTT-208ENST00000510626 MROH2BQ7Z745 1585 aa9.85□□□□□ -0.83
HTT-208ENST00000510626 ZNF397Q8NF99 534 aaPredicted RBP9.85□□□□□ -0.83
HTT-208ENST00000510626 RBM33Q96EV2 1170 aaKnown RBP9.85□□□□□ -0.83
HTT-208ENST00000510626 PHAXQ9H814 394 aaKnown RBP9.85□□□□□ -0.83
HTT-208ENST00000510626 SERPINC1P01008 464 aa9.85□□□□□ -0.83
HTT-208ENST00000510626 CCDC91Q7Z6B0 441 aa9.85□□□□□ -0.83
HTT-208ENST00000510626 CLGNO14967 610 aa9.85□□□□□ -0.83
HTT-208ENST00000510626 UBTFL1P0CB47 393 aaPredicted RBP9.85□□□□□ -0.83
HTT-208ENST00000510626 STK26Q9P289 416 aa9.85□□□□□ -0.83
HTT-208ENST00000510626 NBPF1Q3BBV0 1214 aa9.85□□□□□ -0.83
HTT-208ENST00000510626 CEP131Q9UPN4 1083 aa9.84□□□□□ -0.83
HTT-208ENST00000510626 CLASRPQ8N2M8 674 aaKnown RBP9.84□□□□□ -0.83
HTT-208ENST00000510626 USH1CQ9Y6N9 552 aa9.84□□□□□ -0.83
HTT-208ENST00000510626 TACO1Q9BSH4 297 aaKnown RBP9.84□□□□□ -0.83
HTT-208ENST00000510626 PTPN14Q15678 1187 aa9.84□□□□□ -0.83
HTT-208ENST00000510626 MAP3K11Q16584 847 aa9.84□□□□□ -0.83
HTT-208ENST00000510626 SPATA24Q86W54 205 aa9.84□□□□□ -0.83
HTT-208ENST00000510626 EFCAB5A4FU69 1503 aa9.84□□□□□ -0.83
HTT-208ENST00000510626 SEPT7Q16181 437 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms