RNA–Protein interactions for RNA: ENST00000510405.5

SPOCK1-208, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 5

Gene SPOCK1, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-208ENST00000510405 RXRBP28702 533 aa24.33■■□□□ 1.49
SPOCK1-208ENST00000510405 PAK3O75914 559 aaPredicted RBP24.32■■□□□ 1.48
SPOCK1-208ENST00000510405 USP21Q9UK80 565 aa24.32■■□□□ 1.48
SPOCK1-208ENST00000510405 CCER1Q8TC90 406 aaPredicted RBP24.31■■□□□ 1.48
SPOCK1-208ENST00000510405 TRPC5Q9UL62 973 aaPredicted RBP24.3■■□□□ 1.48
SPOCK1-208ENST00000510405 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.3■■□□□ 1.48
SPOCK1-208ENST00000510405 RBM6P78332 1123 aaKnown RBP24.29■■□□□ 1.48
SPOCK1-208ENST00000510405 QTRT2Q9H974 415 aaKnown RBP24.29■■□□□ 1.48
SPOCK1-208ENST00000510405 PUS7Q96PZ0 661 aaKnown RBP24.28■■□□□ 1.48
SPOCK1-208ENST00000510405 SLIT2O94813 1529 aa24.26■■□□□ 1.47
SPOCK1-208ENST00000510405 ZNF692Q9BU19 519 aaPredicted RBP24.26■■□□□ 1.47
SPOCK1-208ENST00000510405 CABP1Q9NZU7 370 aa24.26■■□□□ 1.47
SPOCK1-208ENST00000510405 NWD2Q9ULI1 1742 aa24.26■■□□□ 1.47
SPOCK1-208ENST00000510405 CRYBG1Q9Y4K1 1723 aa24.25■■□□□ 1.47
SPOCK1-208ENST00000510405 CABLES1Q8TDN4 633 aa24.25■■□□□ 1.47
SPOCK1-208ENST00000510405 ATRNO75882 1429 aa24.25■■□□□ 1.47
SPOCK1-208ENST00000510405 BCL9LQ86UU0 1499 aa24.25■■□□□ 1.47
SPOCK1-208ENST00000510405 USP6P35125 1406 aa24.24■■□□□ 1.47
SPOCK1-208ENST00000510405 UNC5CLQ8IV45 518 aa24.22■■□□□ 1.47
SPOCK1-208ENST00000510405 ABTB2Q8N961 1025 aa24.21■■□□□ 1.47
SPOCK1-208ENST00000510405 COL14A1Q05707 1796 aaKnown RBP24.21■■□□□ 1.47
SPOCK1-208ENST00000510405 PLCH1Q4KWH8 1693 aa24.21■■□□□ 1.47
SPOCK1-208ENST00000510405 NINLQ9Y2I6 1382 aa24.2■■□□□ 1.46
SPOCK1-208ENST00000510405 AKAP12Q02952 1782 aa24.2■■□□□ 1.46
SPOCK1-208ENST00000510405 PHRF1Q9P1Y6 1649 aaKnown RBP24.2■■□□□ 1.46
SPOCK1-208ENST00000510405 USP47Q96K76 1375 aa24.19■■□□□ 1.46
SPOCK1-208ENST00000510405 ST20-MTHFSA0A0A6YYL1 179 aa24.19■■□□□ 1.46
SPOCK1-208ENST00000510405 NLRP13Q86W25 1043 aa24.19■■□□□ 1.46
SPOCK1-208ENST00000510405 CPSF1Q10570 1443 aaKnown RBP24.18■■□□□ 1.46
SPOCK1-208ENST00000510405 SSH2Q76I76 1423 aa24.18■■□□□ 1.46
SPOCK1-208ENST00000510405 TESK2Q96S53 571 aa24.17■■□□□ 1.46
SPOCK1-208ENST00000510405 USP19O94966 1318 aa24.16■■□□□ 1.46
SPOCK1-208ENST00000510405 TTC21AQ8NDW8 1320 aa24.16■■□□□ 1.46
SPOCK1-208ENST00000510405 PLEKHG5O94827 1062 aa24.16■■□□□ 1.46
SPOCK1-208ENST00000510405 FAM83GA6ND36 823 aa24.15■■□□□ 1.46
SPOCK1-208ENST00000510405 GJD4Q96KN9 370 aaPredicted RBP24.15■■□□□ 1.46
SPOCK1-208ENST00000510405 RGS12O14924 1447 aa24.14■■□□□ 1.45
SPOCK1-208ENST00000510405 VPS72Q15906 364 aa24.14■■□□□ 1.45
SPOCK1-208ENST00000510405 PRDM11Q9NQV5 511 aa24.14■■□□□ 1.45
SPOCK1-208ENST00000510405 KTN1Q86UP2 1357 aaKnown RBP24.14■■□□□ 1.45
SPOCK1-208ENST00000510405 MON2Q7Z3U7 1717 aa24.13■■□□□ 1.45
SPOCK1-208ENST00000510405 CDCA8Q53HL2 280 aa24.13■■□□□ 1.45
SPOCK1-208ENST00000510405 HDGFL2Q7Z4V5 671 aaPredicted RBP24.13■■□□□ 1.45
SPOCK1-208ENST00000510405 TERF2IPQ9NYB0 399 aa24.13■■□□□ 1.45
SPOCK1-208ENST00000510405 NRKQ7Z2Y5 1582 aa24.12■■□□□ 1.45
SPOCK1-208ENST00000510405 TMF1P82094 1093 aa24.12■■□□□ 1.45
SPOCK1-208ENST00000510405 CPDO75976 1380 aa24.12■■□□□ 1.45
SPOCK1-208ENST00000510405 NRAPQ86VF7 1730 aa24.11■■□□□ 1.45
SPOCK1-208ENST00000510405 TTC21BQ7Z4L5 1316 aa24.1■■□□□ 1.45
SPOCK1-208ENST00000510405 NLRP6P59044 892 aa24.1■■□□□ 1.45
SPOCK1-208ENST00000510405 NUTM2GQ5VZR2 741 aa24.1■■□□□ 1.45
SPOCK1-208ENST00000510405 TMC1Q8TDI8 760 aa24.1■■□□□ 1.45
SPOCK1-208ENST00000510405 KIAA0232Q92628 1395 aa24.1■■□□□ 1.45
SPOCK1-208ENST00000510405 PIK3C2AO00443 1686 aa24.1■■□□□ 1.45
SPOCK1-208ENST00000510405 BTG4Q9NY30 223 aa24.09■■□□□ 1.45
SPOCK1-208ENST00000510405 SLIT3O75094 1523 aa24.09■■□□□ 1.45
SPOCK1-208ENST00000510405 GCP02774 474 aa24.08■■□□□ 1.45
SPOCK1-208ENST00000510405 EDC4Q6P2E9 1401 aaKnown RBP24.07■■□□□ 1.44
SPOCK1-208ENST00000510405 GLI3P10071 1580 aa24.07■■□□□ 1.44
SPOCK1-208ENST00000510405 CD163L1Q9NR16 1453 aa24.07■■□□□ 1.44
SPOCK1-208ENST00000510405 KCNH5Q8NCM2 988 aa24.06■■□□□ 1.44
SPOCK1-208ENST00000510405 ZC3H6P61129 1189 aaKnown RBP24.05■■□□□ 1.44
SPOCK1-208ENST00000510405 CCDC9Q9Y3X0 531 aaKnown RBP24.05■■□□□ 1.44
SPOCK1-208ENST00000510405 SLC12A5Q9H2X9 1139 aa24.04■■□□□ 1.44
SPOCK1-208ENST00000510405 USP54Q70EL1 1684 aa24.04■■□□□ 1.44
SPOCK1-208ENST00000510405 A0A1W2PP64 1363 aa24.02■■□□□ 1.44
SPOCK1-208ENST00000510405 USP31Q70CQ4 1352 aa24.02■■□□□ 1.44
SPOCK1-208ENST00000510405 LMO7Q8WWI1 1683 aa24.02■■□□□ 1.44
SPOCK1-208ENST00000510405 ONECUT3O60422 494 aaPredicted RBP24.01■■□□□ 1.43
SPOCK1-208ENST00000510405 ANKRD36BQ8N2N9 1353 aa24.01■■□□□ 1.43
SPOCK1-208ENST00000510405 EIF4G2P78344 907 aaKnown RBP eCLIP23.99■■□□□ 1.43
SPOCK1-208ENST00000510405 CHRNA2Q15822 529 aa23.99■■□□□ 1.43
SPOCK1-208ENST00000510405 SPATA31A5Q5VU36 1347 aa23.99■■□□□ 1.43
SPOCK1-208ENST00000510405 SPATA31A7Q8IWB4 1347 aa23.99■■□□□ 1.43
SPOCK1-208ENST00000510405 AATKQ6ZMQ8 1374 aa23.99■■□□□ 1.43
SPOCK1-208ENST00000510405 ABCC6O95255 1503 aa23.98■■□□□ 1.43
SPOCK1-208ENST00000510405 EVA1CP58658 441 aa23.97■■□□□ 1.43
SPOCK1-208ENST00000510405 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.97■■□□□ 1.43
SPOCK1-208ENST00000510405 UPF1Q92900 1129 aaKnown RBP eCLIP23.97■■□□□ 1.43
SPOCK1-208ENST00000510405 CAMTA1Q9Y6Y1 1673 aa23.95■■□□□ 1.43
SPOCK1-208ENST00000510405 SPATA31A1Q5TZJ5 1347 aa23.94■■□□□ 1.42
SPOCK1-208ENST00000510405 SEPT12Q8IYM1 358 aa23.94■■□□□ 1.42
SPOCK1-208ENST00000510405 NFAT5O94916 1531 aa23.94■■□□□ 1.42
SPOCK1-208ENST00000510405 COL5A2P05997 1499 aaPredicted RBP23.94■■□□□ 1.42
SPOCK1-208ENST00000510405 ARHGEF25Q86VW2 580 aa23.93■■□□□ 1.42
SPOCK1-208ENST00000510405 STRN4Q9NRL3 753 aa23.93■■□□□ 1.42
SPOCK1-208ENST00000510405 CCDC125Q86Z20 511 aa23.92■■□□□ 1.42
SPOCK1-208ENST00000510405 THRAP3Q9Y2W1 955 aaKnown RBP23.92■■□□□ 1.42
SPOCK1-208ENST00000510405 NME9Q86XW9 330 aa23.91■■□□□ 1.42
SPOCK1-208ENST00000510405 FAM98CQ17RN3 349 aaKnown RBP23.9■■□□□ 1.42
SPOCK1-208ENST00000510405 OVOS2A0A0J9YW53 1432 aa23.9■■□□□ 1.42
SPOCK1-208ENST00000510405 OVOS2Q6IE36 1432 aa23.9■■□□□ 1.42
SPOCK1-208ENST00000510405 COL18A1P39060 1754 aa23.9■■□□□ 1.42
SPOCK1-208ENST00000510405 THSD7AQ9UPZ6 1657 aa23.89■■□□□ 1.42
SPOCK1-208ENST00000510405 A0A0G2JS52 829 aa23.89■■□□□ 1.41
SPOCK1-208ENST00000510405 MYT1Q01538 1121 aa23.89■■□□□ 1.41
SPOCK1-208ENST00000510405 BARGINQ6ZT62 677 aa23.89■■□□□ 1.41
SPOCK1-208ENST00000510405 CRB1P82279 1406 aa23.89■■□□□ 1.41
SPOCK1-208ENST00000510405 BRWD3Q6RI45 1802 aa23.89■■□□□ 1.41
SPOCK1-208ENST00000510405 KRT27Q7Z3Y8 459 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms