RNA–Protein interactions for RNA: ENST00000510312.6

ARHGEF28-210, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 8,285 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-210ENST00000510312 LEKR1Q6ZMV7 388 aa10.7□□□□□ -0.7
ARHGEF28-210ENST00000510312 USP47Q96K76 1375 aa10.7□□□□□ -0.7
ARHGEF28-210ENST00000510312 TTLL5Q6EMB2 1281 aa10.69□□□□□ -0.7
ARHGEF28-210ENST00000510312 ROCK1Q13464 1354 aa10.69□□□□□ -0.7
ARHGEF28-210ENST00000510312 ARHGAP5Q13017 1502 aa10.69□□□□□ -0.7
ARHGEF28-210ENST00000510312 RRP1P56182 461 aaKnown RBP10.69□□□□□ -0.7
ARHGEF28-210ENST00000510312 FSD1Q9BTV5 496 aa10.69□□□□□ -0.7
ARHGEF28-210ENST00000510312 LNPKQ9C0E8 428 aa10.69□□□□□ -0.7
ARHGEF28-210ENST00000510312 DDX19BQ9UMR2 479 aa10.69□□□□□ -0.7
ARHGEF28-210ENST00000510312 MAP4K4O95819 1239 aaPredicted RBP10.69□□□□□ -0.7
ARHGEF28-210ENST00000510312 CDK5RAP3Q96JB5 506 aa10.69□□□□□ -0.7
ARHGEF28-210ENST00000510312 CALCOCO1Q9P1Z2 691 aa10.69□□□□□ -0.7
ARHGEF28-210ENST00000510312 HOMER1Q86YM7 354 aa10.69□□□□□ -0.7
ARHGEF28-210ENST00000510312 PDILTQ8N807 584 aa10.69□□□□□ -0.7
ARHGEF28-210ENST00000510312 ZNF644Q9H582 1327 aaPredicted RBP10.69□□□□□ -0.7
ARHGEF28-210ENST00000510312 MPHOSPH10O00566 681 aaKnown RBP10.69□□□□□ -0.7
ARHGEF28-210ENST00000510312 SMG6Q86US8 1419 aaKnown RBP10.68□□□□□ -0.7
ARHGEF28-210ENST00000510312 SASS6Q6UVJ0 657 aa10.68□□□□□ -0.7
ARHGEF28-210ENST00000510312 SIL1Q9H173 461 aa10.68□□□□□ -0.7
ARHGEF28-210ENST00000510312 MYCNP04198 464 aaPredicted RBP10.68□□□□□ -0.7
ARHGEF28-210ENST00000510312 GNAI1P63096 354 aa10.68□□□□□ -0.7
ARHGEF28-210ENST00000510312 SLC3A2P08195 630 aaKnown RBP10.68□□□□□ -0.7
ARHGEF28-210ENST00000510312 REC8O95072 547 aa10.67□□□□□ -0.7
ARHGEF28-210ENST00000510312 XBP1P17861 261 aa10.67□□□□□ -0.7
ARHGEF28-210ENST00000510312 KRT18P05783 430 aaKnown RBP10.67□□□□□ -0.7
ARHGEF28-210ENST00000510312 MIA2Q96PC5 1412 aa10.67□□□□□ -0.7
ARHGEF28-210ENST00000510312 HSP90AB4PQ58FF6 505 aa10.67□□□□□ -0.7
ARHGEF28-210ENST00000510312 ZHX3Q9H4I2 956 aa10.67□□□□□ -0.7
ARHGEF28-210ENST00000510312 ZNF219Q9P2Y4 722 aaPredicted RBP10.67□□□□□ -0.7
ARHGEF28-210ENST00000510312 MATR3P43243 847 aaKnown RBP eCLIP10.67□□□□□ -0.7
ARHGEF28-210ENST00000510312 PRAM1Q96QH2 718 aa10.67□□□□□ -0.7
ARHGEF28-210ENST00000510312 CCDC30Q5VVM6 783 aa10.67□□□□□ -0.7
ARHGEF28-210ENST00000510312 INTS3Q68E01 1043 aaKnown RBP10.67□□□□□ -0.7
ARHGEF28-210ENST00000510312 FAM107BQ9H098 131 aa10.67□□□□□ -0.7
ARHGEF28-210ENST00000510312 CNTROBQ8N137 903 aa10.67□□□□□ -0.7
ARHGEF28-210ENST00000510312 TOP2AP11388 1531 aaKnown RBP10.66□□□□□ -0.7
ARHGEF28-210ENST00000510312 ESPNB1AK53 854 aa10.66□□□□□ -0.7
ARHGEF28-210ENST00000510312 NINLQ9Y2I6 1382 aa10.66□□□□□ -0.7
ARHGEF28-210ENST00000510312 C1orf115Q9H7X2 142 aa10.66□□□□□ -0.7
ARHGEF28-210ENST00000510312 OFD1O75665 1012 aa10.65□□□□□ -0.7
ARHGEF28-210ENST00000510312 PIBF1Q8WXW3 757 aa10.65□□□□□ -0.7
ARHGEF28-210ENST00000510312 CCDC158Q5M9N0 1113 aa10.65□□□□□ -0.7
ARHGEF28-210ENST00000510312 ADAMTS2O95450 1211 aa10.65□□□□□ -0.7
ARHGEF28-210ENST00000510312 MNS1Q8NEH6 495 aa10.65□□□□□ -0.7
ARHGEF28-210ENST00000510312 OLFM4Q6UX06 510 aa10.65□□□□□ -0.7
ARHGEF28-210ENST00000510312 RAD54L2Q9Y4B4 1467 aa10.65□□□□□ -0.7
ARHGEF28-210ENST00000510312 H0YHG0 523 aa10.65□□□□□ -0.7
ARHGEF28-210ENST00000510312 SURF6O75683 361 aaKnown RBP10.65□□□□□ -0.7
ARHGEF28-210ENST00000510312 GNL3LQ9NVN8 582 aaKnown RBP10.65□□□□□ -0.71
ARHGEF28-210ENST00000510312 BRPF1P55201 1214 aaPredicted RBP10.64□□□□□ -0.71
ARHGEF28-210ENST00000510312 SART3Q15020 963 aaKnown RBP10.64□□□□□ -0.71
ARHGEF28-210ENST00000510312 CCDC85AQ96PX6 553 aaPredicted RBP10.64□□□□□ -0.71
ARHGEF28-210ENST00000510312 RUFY1Q96T51 708 aa10.64□□□□□ -0.71
ARHGEF28-210ENST00000510312 MCM5P33992 734 aa10.64□□□□□ -0.71
ARHGEF28-210ENST00000510312 PANK1Q8TE04 598 aa10.64□□□□□ -0.71
ARHGEF28-210ENST00000510312 CDK19Q9BWU1 502 aa10.64□□□□□ -0.71
ARHGEF28-210ENST00000510312 MTHFSP49914 203 aa10.64□□□□□ -0.71
ARHGEF28-210ENST00000510312 PPM1FP49593 454 aaPredicted RBP10.64□□□□□ -0.71
ARHGEF28-210ENST00000510312 CEBPZQ03701 1054 aaKnown RBP10.64□□□□□ -0.71
ARHGEF28-210ENST00000510312 TTLL12Q14166 644 aaPredicted RBP10.64□□□□□ -0.71
ARHGEF28-210ENST00000510312 CIZ1Q9ULV3 898 aaPredicted RBP10.64□□□□□ -0.71
ARHGEF28-210ENST00000510312 SPG7Q9UQ90 795 aa10.64□□□□□ -0.71
ARHGEF28-210ENST00000510312 SLC26A8Q96RN1 970 aa10.63□□□□□ -0.71
ARHGEF28-210ENST00000510312 AQRO60306 1485 aaKnown RBP eCLIP10.63□□□□□ -0.713e-7■□□□□ 11.2
ARHGEF28-210ENST00000510312 GAPVD1Q14C86 1478 aa10.63□□□□□ -0.71
ARHGEF28-210ENST00000510312 AFAP1Q8N556 730 aa10.63□□□□□ -0.71
ARHGEF28-210ENST00000510312 GAS2L2Q8NHY3 880 aa10.63□□□□□ -0.71
ARHGEF28-210ENST00000510312 KIF2AO00139 706 aaPredicted RBP10.63□□□□□ -0.71
ARHGEF28-210ENST00000510312 PDIA4P13667 645 aaKnown RBP10.63□□□□□ -0.71
ARHGEF28-210ENST00000510312 ZC3H6P61129 1189 aaKnown RBP10.63□□□□□ -0.71
ARHGEF28-210ENST00000510312 STK3Q13188 491 aa10.63□□□□□ -0.71
ARHGEF28-210ENST00000510312 MPHOSPH8Q99549 860 aa10.63□□□□□ -0.71
ARHGEF28-210ENST00000510312 CCDC73Q6ZRK6 1079 aa10.63□□□□□ -0.71
ARHGEF28-210ENST00000510312 NUP133Q8WUM0 1156 aa10.62□□□□□ -0.71
ARHGEF28-210ENST00000510312 TRAK2O60296 914 aa10.62□□□□□ -0.71
ARHGEF28-210ENST00000510312 ZSCAN30Q86W11 494 aa10.62□□□□□ -0.71
ARHGEF28-210ENST00000510312 NAT10Q9H0A0 1025 aaKnown RBP10.62□□□□□ -0.71
ARHGEF28-210ENST00000510312 EIF3JO75822 258 aaKnown RBP10.62□□□□□ -0.71
ARHGEF28-210ENST00000510312 THEMISQ8N1K5 641 aaPredicted RBP10.62□□□□□ -0.71
ARHGEF28-210ENST00000510312 SYCP1Q15431 976 aa10.62□□□□□ -0.71
ARHGEF28-210ENST00000510312 CAGE1Q8TC20 777 aa10.62□□□□□ -0.71
ARHGEF28-210ENST00000510312 CTR9Q6PD62 1173 aa10.62□□□□□ -0.71
ARHGEF28-210ENST00000510312 ANKLE2Q86XL3 938 aa10.61□□□□□ -0.71
ARHGEF28-210ENST00000510312 INCENPQ9NQS7 918 aa10.61□□□□□ -0.71
ARHGEF28-210ENST00000510312 KIF7Q2M1P5 1343 aa10.61□□□□□ -0.71
ARHGEF28-210ENST00000510312 GOLGA6L7A0A1B0GV03 622 aa10.61□□□□□ -0.71
ARHGEF28-210ENST00000510312 MCM2P49736 904 aa10.61□□□□□ -0.71
ARHGEF28-210ENST00000510312 FKBP4Q02790 459 aaKnown RBP eCLIP10.61□□□□□ -0.71
ARHGEF28-210ENST00000510312 IL27Q8NEV9 243 aa10.61□□□□□ -0.71
ARHGEF28-210ENST00000510312 BRPF3Q9ULD4 1205 aa10.61□□□□□ -0.71
ARHGEF28-210ENST00000510312 MAGEC2Q9UBF1 373 aaPredicted RBP10.61□□□□□ -0.71
ARHGEF28-210ENST00000510312 CFAP70Q5T0N1 1121 aa10.61□□□□□ -0.71
ARHGEF28-210ENST00000510312 PRKAR2BP31323 418 aa10.61□□□□□ -0.71
ARHGEF28-210ENST00000510312 CLASRPQ8N2M8 674 aaKnown RBP10.6□□□□□ -0.71
ARHGEF28-210ENST00000510312 CCDC69A6NI79 296 aa10.6□□□□□ -0.71
ARHGEF28-210ENST00000510312 PSMA5P28066 241 aa10.6□□□□□ -0.71
ARHGEF28-210ENST00000510312 SULT6B1Q6IMI4 303 aa10.6□□□□□ -0.71
ARHGEF28-210ENST00000510312 PRDM11Q9NQV5 511 aa10.6□□□□□ -0.71
ARHGEF28-210ENST00000510312 RUSC2Q8N2Y8 1516 aa10.6□□□□□ -0.71
ARHGEF28-210ENST00000510312 USP5P45974 858 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms