RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 PLEKHG3A1L390 1219 aa38.38■■■■□ 3.73
SNF8-208ENST00000510195 CCDC125Q86Z20 511 aa38.36■■■■□ 3.73
SNF8-208ENST00000510195 SIN3AQ96ST3 1273 aa38.36■■■■□ 3.73
SNF8-208ENST00000510195 TOPAZ1Q8N9V7 1692 aa38.35■■■■□ 3.73
SNF8-208ENST00000510195 ONECUT3O60422 494 aaPredicted RBP38.33■■■■□ 3.73
SNF8-208ENST00000510195 ACEP12821 1306 aa38.33■■■■□ 3.73
SNF8-208ENST00000510195 NBPF8Q3BBV2 869 aa38.32■■■■□ 3.72
SNF8-208ENST00000510195 COL14A1Q05707 1796 aaKnown RBP38.31■■■■□ 3.72
SNF8-208ENST00000510195 CRYBG1Q9Y4K1 1723 aa38.29■■■■□ 3.72
SNF8-208ENST00000510195 BTG4Q9NY30 223 aa38.29■■■■□ 3.72
SNF8-208ENST00000510195 CCDC9Q9Y3X0 531 aaKnown RBP38.29■■■■□ 3.72
SNF8-208ENST00000510195 SRPK2P78362 688 aaKnown RBP38.28■■■■□ 3.72
SNF8-208ENST00000510195 NEUROD1Q13562 356 aa38.28■■■■□ 3.72
SNF8-208ENST00000510195 SEPT12Q8IYM1 358 aa38.26■■■■□ 3.72
SNF8-208ENST00000510195 TRPM1Q7Z4N2 1603 aa38.25■■■■□ 3.71
SNF8-208ENST00000510195 NRAPQ86VF7 1730 aa38.24■■■■□ 3.71
SNF8-208ENST00000510195 QRICH2Q9H0J4 1663 aa38.23■■■■□ 3.71
SNF8-208ENST00000510195 PRDM11Q9NQV5 511 aa38.22■■■■□ 3.71
SNF8-208ENST00000510195 PPIP5K1Q6PFW1 1433 aa38.21■■■■□ 3.71
SNF8-208ENST00000510195 BRD4O60885 1362 aaPredicted RBP38.21■■■■□ 3.71
SNF8-208ENST00000510195 CABP2Q9NPB3 220 aa38.2■■■■□ 3.71
SNF8-208ENST00000510195 ROCK2O75116 1388 aaKnown RBP38.19■■■■□ 3.7
SNF8-208ENST00000510195 BRWD3Q6RI45 1802 aa38.19■■■■□ 3.7
SNF8-208ENST00000510195 ABTB2Q8N961 1025 aa38.17■■■■□ 3.7
SNF8-208ENST00000510195 EVC2Q86UK5 1308 aa38.16■■■■□ 3.7
SNF8-208ENST00000510195 KIAA0232Q92628 1395 aa38.15■■■■□ 3.7
SNF8-208ENST00000510195 PHRF1Q9P1Y6 1649 aaKnown RBP38.15■■■■□ 3.7
SNF8-208ENST00000510195 KRT27Q7Z3Y8 459 aa38.14■■■■□ 3.7
SNF8-208ENST00000510195 SPATA31A5Q5VU36 1347 aa38.13■■■■□ 3.7
SNF8-208ENST00000510195 SPATA31A7Q8IWB4 1347 aa38.13■■■■□ 3.7
SNF8-208ENST00000510195 BLMP54132 1417 aaPredicted RBP38.13■■■■□ 3.7
SNF8-208ENST00000510195 NUTM2GQ5VZR2 741 aa38.12■■■■□ 3.69
SNF8-208ENST00000510195 NLRP13Q86W25 1043 aa38.11■■■■□ 3.69
SNF8-208ENST00000510195 CABP1Q9NZU7 370 aa38.11■■■■□ 3.69
SNF8-208ENST00000510195 FAM98CQ17RN3 349 aaKnown RBP38.1■■■■□ 3.69
SNF8-208ENST00000510195 USP19O94966 1318 aa38.1■■■■□ 3.69
SNF8-208ENST00000510195 ZC3H6P61129 1189 aaKnown RBP38.08■■■■□ 3.69
SNF8-208ENST00000510195 CPDO75976 1380 aa38.06■■■■□ 3.68
SNF8-208ENST00000510195 A0A0G2JS52 829 aa38.06■■■■□ 3.68
SNF8-208ENST00000510195 MYT1Q01538 1121 aa38.06■■■■□ 3.68
SNF8-208ENST00000510195 CHRNA2Q15822 529 aa38.05■■■■□ 3.68
SNF8-208ENST00000510195 USP6P35125 1406 aa38.04■■■■□ 3.68
SNF8-208ENST00000510195 NRKQ7Z2Y5 1582 aa38.03■■■■□ 3.68
SNF8-208ENST00000510195 SF3B2Q13435 895 aaKnown RBP38.03■■■■□ 3.68
SNF8-208ENST00000510195 ZRANB1Q9UGI0 708 aa38.02■■■■□ 3.68
SNF8-208ENST00000510195 SPATA31A1Q5TZJ5 1347 aa38.02■■■■□ 3.68
SNF8-208ENST00000510195 GCP02774 474 aa38.01■■■■□ 3.68
SNF8-208ENST00000510195 ZNF692Q9BU19 519 aaPredicted RBP38■■■■□ 3.67
SNF8-208ENST00000510195 TRIM26Q12899 539 aaPredicted RBP37.99■■■■□ 3.67
SNF8-208ENST00000510195 TONSLQ96HA7 1378 aa37.98■■■■□ 3.67
SNF8-208ENST00000510195 SBNO2Q9Y2G9 1366 aa37.98■■■■□ 3.67
SNF8-208ENST00000510195 SSH2Q76I76 1423 aa37.97■■■■□ 3.67
SNF8-208ENST00000510195 EVA1CP58658 441 aa37.97■■■■□ 3.67
SNF8-208ENST00000510195 STRN4Q9NRL3 753 aa37.97■■■■□ 3.67
SNF8-208ENST00000510195 THSD7AQ9UPZ6 1657 aa37.96■■■■□ 3.67
SNF8-208ENST00000510195 CARD11Q9BXL7 1154 aa37.95■■■■□ 3.67
SNF8-208ENST00000510195 NLRP6P59044 892 aa37.94■■■■□ 3.66
SNF8-208ENST00000510195 SRCAPQ6ZRS2 3230 aa37.93■■■■□ 3.66
SNF8-208ENST00000510195 CAMTA1Q9Y6Y1 1673 aa37.92■■■■□ 3.66
SNF8-208ENST00000510195 LMO7Q8WWI1 1683 aa37.92■■■■□ 3.66
SNF8-208ENST00000510195 BARGINQ6ZT62 677 aa37.91■■■■□ 3.66
SNF8-208ENST00000510195 SLIT3O75094 1523 aa37.88■■■■□ 3.65
SNF8-208ENST00000510195 DEFB132Q7Z7B7 95 aa37.88■■■■□ 3.65
SNF8-208ENST00000510195 THRAP3Q9Y2W1 955 aaKnown RBP37.86■■■■□ 3.65
SNF8-208ENST00000510195 CPSF1Q10570 1443 aaKnown RBP37.86■■■■□ 3.65
SNF8-208ENST00000510195 TTC21BQ7Z4L5 1316 aa37.86■■■■□ 3.65
SNF8-208ENST00000510195 TTC21AQ8NDW8 1320 aa37.86■■■■□ 3.65
SNF8-208ENST00000510195 AKAP12Q02952 1782 aa37.85■■■■□ 3.65
SNF8-208ENST00000510195 AATKQ6ZMQ8 1374 aa37.84■■■■□ 3.65
SNF8-208ENST00000510195 BAG6P46379 1132 aa37.84■■■■□ 3.65
SNF8-208ENST00000510195 LARP1Q6PKG0 1096 aaKnown RBP37.84■■■■□ 3.65
SNF8-208ENST00000510195 PIK3C2AO00443 1686 aa37.83■■■■□ 3.65
SNF8-208ENST00000510195 TCP11L2Q8N4U5 519 aa37.83■■■■□ 3.65
SNF8-208ENST00000510195 USP35Q9P2H5 1018 aa37.82■■■■□ 3.64
SNF8-208ENST00000510195 COL5A2P05997 1499 aaPredicted RBP37.81■■■■□ 3.64
SNF8-208ENST00000510195 KCNH5Q8NCM2 988 aa37.8■■■■□ 3.64
SNF8-208ENST00000510195 FAM196AQ6ZSG2 479 aa37.79■■■■□ 3.64
SNF8-208ENST00000510195 KTN1Q86UP2 1357 aaKnown RBP37.79■■■■□ 3.64
SNF8-208ENST00000510195 PUS7Q96PZ0 661 aaKnown RBP37.78■■■■□ 3.64
SNF8-208ENST00000510195 RGPD1P0DJD0 1748 aa37.78■■■■□ 3.64
SNF8-208ENST00000510195 FAM182BQ5T319 152 aa37.77■■■■□ 3.64
SNF8-208ENST00000510195 CRB1P82279 1406 aa37.75■■■■□ 3.63
SNF8-208ENST00000510195 PDE3BQ13370 1112 aa37.74■■■■□ 3.63
SNF8-208ENST00000510195 SLC24A1O60721 1099 aa37.73■■■■□ 3.63
SNF8-208ENST00000510195 DISP2A7MBM2 1401 aa37.72■■■■□ 3.63
SNF8-208ENST00000510195 ARHGEF25Q86VW2 580 aa37.72■■■■□ 3.63
SNF8-208ENST00000510195 ZBTB7CA1YPR0 619 aa37.71■■■■□ 3.63
SNF8-208ENST00000510195 MON2Q7Z3U7 1717 aa37.7■■■■□ 3.63
SNF8-208ENST00000510195 COL18A1P39060 1754 aa37.7■■■■□ 3.63
SNF8-208ENST00000510195 C11orf95C9JLR9 678 aaPredicted RBP37.67■■■■□ 3.62
SNF8-208ENST00000510195 HDGFL2Q7Z4V5 671 aaPredicted RBP37.67■■■■□ 3.62
SNF8-208ENST00000510195 CD163L1Q9NR16 1453 aa37.66■■■■□ 3.62
SNF8-208ENST00000510195 USP31Q70CQ4 1352 aa37.66■■■■□ 3.62
SNF8-208ENST00000510195 EN1Q05925 392 aaPredicted RBP37.65■■■■□ 3.62
SNF8-208ENST00000510195 TMC1Q8TDI8 760 aa37.65■■■■□ 3.62
SNF8-208ENST00000510195 AXIN2Q9Y2T1 843 aa37.65■■■■□ 3.62
SNF8-208ENST00000510195 PARP4Q9UKK3 1724 aaKnown RBP37.64■■■■□ 3.62
SNF8-208ENST00000510195 WDR17Q8IZU2 1322 aa37.64■■■■□ 3.62
SNF8-208ENST00000510195 TOM1L2Q6ZVM7 507 aa37.64■■■■□ 3.62
SNF8-208ENST00000510195 TNS1Q9HBL0 1735 aaKnown RBP37.64■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms