RNA–Protein interactions for RNA: ENST00000510003.5

SNCAIP-214, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,039 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-214ENST00000510003 QRICH2Q9H0J4 1663 aa18.32■□□□□ 0.52
SNCAIP-214ENST00000510003 MTHFSP49914 203 aa18.32■□□□□ 0.52
SNCAIP-214ENST00000510003 POGZQ7Z3K3 1410 aa18.32■□□□□ 0.52
SNCAIP-214ENST00000510003 HSP90AA2PQ14568 343 aaPredicted RBP18.32■□□□□ 0.52
SNCAIP-214ENST00000510003 IL16Q14005 1332 aa18.32■□□□□ 0.52
SNCAIP-214ENST00000510003 MROH1Q8NDA8 1641 aa18.31■□□□□ 0.52
SNCAIP-214ENST00000510003 ARXQ96QS3 562 aa18.31■□□□□ 0.52
SNCAIP-214ENST00000510003 ADGRB3O60242 1522 aa18.31■□□□□ 0.52
SNCAIP-214ENST00000510003 ATF7IPQ6VMQ6 1270 aa18.3■□□□□ 0.52
SNCAIP-214ENST00000510003 ABCC11Q96J66 1382 aa18.3■□□□□ 0.52
SNCAIP-214ENST00000510003 RICTORQ6R327 1708 aa18.3■□□□□ 0.52
SNCAIP-214ENST00000510003 LMTK2Q8IWU2 1503 aa18.3■□□□□ 0.52
SNCAIP-214ENST00000510003 TRIM27P14373 513 aa18.3■□□□□ 0.52
SNCAIP-214ENST00000510003 RAB3GAP1Q15042 981 aa18.3■□□□□ 0.52
SNCAIP-214ENST00000510003 SMC4Q9NTJ3 1288 aa18.3■□□□□ 0.52
SNCAIP-214ENST00000510003 MROH2AA6NES4 1674 aa18.29■□□□□ 0.52
SNCAIP-214ENST00000510003 TRIM44Q96DX7 344 aaPredicted RBP18.29■□□□□ 0.52
SNCAIP-214ENST00000510003 FRMPD1Q5SYB0 1578 aa18.29■□□□□ 0.52
SNCAIP-214ENST00000510003 KIF16BQ96L93 1317 aa18.29■□□□□ 0.52
SNCAIP-214ENST00000510003 UGGT1Q9NYU2 1555 aa18.28■□□□□ 0.52
SNCAIP-214ENST00000510003 TPM2P07951 284 aa18.28■□□□□ 0.52
SNCAIP-214ENST00000510003 NUCB1Q02818 461 aa18.28■□□□□ 0.52
SNCAIP-214ENST00000510003 TNPO1Q92973 898 aaKnown RBP18.28■□□□□ 0.52
SNCAIP-214ENST00000510003 SLC12A5Q9H2X9 1139 aa18.28■□□□□ 0.52
SNCAIP-214ENST00000510003 NOS1P29475 1434 aa18.27■□□□□ 0.52
SNCAIP-214ENST00000510003 ANKRD36BQ8N2N9 1353 aa18.27■□□□□ 0.52
SNCAIP-214ENST00000510003 ADGRB1O14514 1584 aa18.27■□□□□ 0.51
SNCAIP-214ENST00000510003 ZBTB40Q9NUA8 1239 aa18.27■□□□□ 0.51
SNCAIP-214ENST00000510003 IPO8O15397 1037 aaKnown RBP18.26■□□□□ 0.51
SNCAIP-214ENST00000510003 U2AF1L5P0DN76 240 aaPredicted RBP18.26■□□□□ 0.51
SNCAIP-214ENST00000510003 TNNT2P45379 298 aaPredicted RBP18.26■□□□□ 0.51
SNCAIP-214ENST00000510003 U2AF1Q01081 240 aaKnown RBP eCLIP18.26■□□□□ 0.51
SNCAIP-214ENST00000510003 ITPRIPQ8IWB1 547 aa18.26■□□□□ 0.51
SNCAIP-214ENST00000510003 IBTKQ9P2D0 1353 aaPredicted RBP18.26■□□□□ 0.51
SNCAIP-214ENST00000510003 HSP90AB1P08238 724 aaKnown RBP18.25■□□□□ 0.51
SNCAIP-214ENST00000510003 BMP2KLQ5H9B9 411 aa18.25■□□□□ 0.51
SNCAIP-214ENST00000510003 C14orf93Q9H972 538 aaKnown RBP18.25■□□□□ 0.51
SNCAIP-214ENST00000510003 REREQ9P2R6 1566 aa18.25■□□□□ 0.51
SNCAIP-214ENST00000510003 CLEC17AQ6ZS10 378 aa18.25■□□□□ 0.51
SNCAIP-214ENST00000510003 SSH1Q8WYL5 1049 aa18.25■□□□□ 0.51
SNCAIP-214ENST00000510003 EXOSC9Q06265 439 aaKnown RBP18.24■□□□□ 0.51
SNCAIP-214ENST00000510003 KIF3BO15066 747 aa18.23■□□□□ 0.51
SNCAIP-214ENST00000510003 CCDC173Q0VFZ6 552 aa18.23■□□□□ 0.51
SNCAIP-214ENST00000510003 PPLO60437 1756 aa18.23■□□□□ 0.51
SNCAIP-214ENST00000510003 ERBB4Q15303 1308 aa18.23■□□□□ 0.51
SNCAIP-214ENST00000510003 ARHGAP31Q2M1Z3 1444 aa18.23■□□□□ 0.51
SNCAIP-214ENST00000510003 CHMP4BQ9H444 224 aaKnown RBP18.23■□□□□ 0.51
SNCAIP-214ENST00000510003 ALDH1L2Q3SY69 923 aa18.22■□□□□ 0.51
SNCAIP-214ENST00000510003 PLEKHF1Q96S99 279 aa18.22■□□□□ 0.51
SNCAIP-214ENST00000510003 PPP1R9BQ96SB3 815 aa18.22■□□□□ 0.51
SNCAIP-214ENST00000510003 MLH3Q9UHC1 1453 aa18.22■□□□□ 0.51
SNCAIP-214ENST00000510003 TMPOP42166 694 aaKnown RBP18.22■□□□□ 0.51
SNCAIP-214ENST00000510003 CHD1LQ86WJ1 897 aa18.22■□□□□ 0.51
SNCAIP-214ENST00000510003 NOB1Q9ULX3 412 aaKnown RBP18.22■□□□□ 0.51
SNCAIP-214ENST00000510003 YEATS2Q9ULM3 1422 aa18.21■□□□□ 0.51
SNCAIP-214ENST00000510003 RPGRIP1LQ68CZ1 1315 aa18.21■□□□□ 0.51
SNCAIP-214ENST00000510003 TMEM57Q8N5G2 664 aa18.21■□□□□ 0.51
SNCAIP-214ENST00000510003 TSR2Q969E8 191 aaKnown RBP18.21■□□□□ 0.51
SNCAIP-214ENST00000510003 ZNF428Q96B54 188 aa18.21■□□□□ 0.51
SNCAIP-214ENST00000510003 KIDINS220Q9ULH0 1771 aa18.2■□□□□ 0.5
SNCAIP-214ENST00000510003 GOLGA6L22H0YM25 854 aa18.2■□□□□ 0.5
SNCAIP-214ENST00000510003 BRPF1P55201 1214 aaPredicted RBP18.2■□□□□ 0.5
SNCAIP-214ENST00000510003 GAS2L3Q86XJ1 694 aa18.2■□□□□ 0.5
SNCAIP-214ENST00000510003 PKNOX2Q96KN3 472 aa18.2■□□□□ 0.5
SNCAIP-214ENST00000510003 TRAK1Q9UPV9 953 aa18.2■□□□□ 0.5
SNCAIP-214ENST00000510003 EVC2Q86UK5 1308 aa18.2■□□□□ 0.5
SNCAIP-214ENST00000510003 MED14O60244 1454 aa18.2■□□□□ 0.5
SNCAIP-214ENST00000510003 COL3A1P02461 1466 aaPredicted RBP18.2■□□□□ 0.5
SNCAIP-214ENST00000510003 TRIM35Q9UPQ4 493 aa18.2■□□□□ 0.5
SNCAIP-214ENST00000510003 HECW2Q9P2P5 1572 aa18.19■□□□□ 0.5
SNCAIP-214ENST00000510003 K7ELQ4 463 aaPredicted RBP18.19■□□□□ 0.5
SNCAIP-214ENST00000510003 GCC1Q96CN9 775 aa18.19■□□□□ 0.5
SNCAIP-214ENST00000510003 KIF2CQ99661 725 aa18.18■□□□□ 0.5
SNCAIP-214ENST00000510003 TERF1P54274 439 aa18.18■□□□□ 0.5
SNCAIP-214ENST00000510003 ANP32BQ92688 251 aaKnown RBP18.17■□□□□ 0.5
SNCAIP-214ENST00000510003 CFAP44Q96MT7 982 aa18.17■□□□□ 0.5
SNCAIP-214ENST00000510003 TULP4Q9NRJ4 1543 aa18.17■□□□□ 0.5
SNCAIP-214ENST00000510003 KLHL40Q2TBA0 621 aa18.16■□□□□ 0.5
SNCAIP-214ENST00000510003 ZSCAN30Q86W11 494 aa18.15■□□□□ 0.5
SNCAIP-214ENST00000510003 LNPKQ9C0E8 428 aa18.15■□□□□ 0.5
SNCAIP-214ENST00000510003 PPIP5K1Q6PFW1 1433 aa18.15■□□□□ 0.5
SNCAIP-214ENST00000510003 HS1BP3Q53T59 392 aa18.15■□□□□ 0.5
SNCAIP-214ENST00000510003 VSIG10Q8N0Z9 540 aa18.15■□□□□ 0.5
SNCAIP-214ENST00000510003 PIK3R4Q99570 1358 aa18.14■□□□□ 0.49
SNCAIP-214ENST00000510003 NASPP49321 788 aaPredicted RBP18.14■□□□□ 0.49
SNCAIP-214ENST00000510003 PDCL3Q9H2J4 239 aa18.14■□□□□ 0.49
SNCAIP-214ENST00000510003 ARHGEF28Q8N1W1 1705 aaKnown RBP18.14■□□□□ 0.49
SNCAIP-214ENST00000510003 ANKRD26Q9UPS8 1709 aa18.14■□□□□ 0.49
SNCAIP-214ENST00000510003 ARHGAP45Q92619 1136 aa18.13■□□□□ 0.49
SNCAIP-214ENST00000510003 DIP2CQ9Y2E4 1556 aa18.12■□□□□ 0.49
SNCAIP-214ENST00000510003 ZNF445P59923 1031 aa18.12■□□□□ 0.49
SNCAIP-214ENST00000510003 ZMYND15Q9H091 742 aa18.12■□□□□ 0.49
SNCAIP-214ENST00000510003 OFD1O75665 1012 aa18.11■□□□□ 0.49
SNCAIP-214ENST00000510003 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.11■□□□□ 0.49
SNCAIP-214ENST00000510003 CDC42BPGQ6DT37 1551 aa18.11■□□□□ 0.49
SNCAIP-214ENST00000510003 PTCH1Q13635 1447 aa18.11■□□□□ 0.49
SNCAIP-214ENST00000510003 U2SURPO15042 1029 aaKnown RBP18.1■□□□□ 0.49
SNCAIP-214ENST00000510003 TBC1D9Q6ZT07 1266 aa18.1■□□□□ 0.49
SNCAIP-214ENST00000510003 BAG4O95429 457 aaKnown RBP18.1■□□□□ 0.49
SNCAIP-214ENST00000510003 RIPK4P57078 832 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms