RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 FAM83GA6ND36 823 aa14.6□□□□□ -0.07
SCARB2-204ENST00000509994 SRPK2P78362 688 aaKnown RBP14.6□□□□□ -0.07
SCARB2-204ENST00000509994 SF3B2Q13435 895 aaKnown RBP14.6□□□□□ -0.07
SCARB2-204ENST00000509994 VPS72Q15906 364 aa14.6□□□□□ -0.07
SCARB2-204ENST00000509994 BTG4Q9NY30 223 aa14.6□□□□□ -0.07
SCARB2-204ENST00000509994 NRAPQ86VF7 1730 aa14.6□□□□□ -0.07
SCARB2-204ENST00000509994 NEUROD1Q13562 356 aa14.59□□□□□ -0.07
SCARB2-204ENST00000509994 NBPF1Q3BBV0 1214 aa14.59□□□□□ -0.07
SCARB2-204ENST00000509994 NUTM2GQ5VZR2 741 aa14.59□□□□□ -0.07
SCARB2-204ENST00000509994 SEPT12Q8IYM1 358 aa14.59□□□□□ -0.07
SCARB2-204ENST00000509994 PRDM11Q9NQV5 511 aa14.59□□□□□ -0.07
SCARB2-204ENST00000509994 CRYBG1Q9Y4K1 1723 aa14.58□□□□□ -0.07
SCARB2-204ENST00000509994 CENPJQ9HC77 1338 aaPredicted RBP14.58□□□□□ -0.08
SCARB2-204ENST00000509994 PHRF1Q9P1Y6 1649 aaKnown RBP14.58□□□□□ -0.08
SCARB2-204ENST00000509994 CCDC125Q86Z20 511 aa14.57□□□□□ -0.08
SCARB2-204ENST00000509994 FAM98CQ17RN3 349 aaKnown RBP14.56□□□□□ -0.08
SCARB2-204ENST00000509994 ZRANB1Q9UGI0 708 aa14.56□□□□□ -0.08
SCARB2-204ENST00000509994 CCDC61Q9Y6R9 512 aa14.56□□□□□ -0.08
SCARB2-204ENST00000509994 ACEP12821 1306 aa14.56□□□□□ -0.08
SCARB2-204ENST00000509994 KRT27Q7Z3Y8 459 aa14.55□□□□□ -0.08
SCARB2-204ENST00000509994 STRN4Q9NRL3 753 aa14.55□□□□□ -0.08
SCARB2-204ENST00000509994 PPIP5K1Q6PFW1 1433 aa14.55□□□□□ -0.08
SCARB2-204ENST00000509994 ZC3H6P61129 1189 aaKnown RBP14.54□□□□□ -0.08
SCARB2-204ENST00000509994 CHRNA2Q15822 529 aa14.54□□□□□ -0.08
SCARB2-204ENST00000509994 ABTB2Q8N961 1025 aa14.54□□□□□ -0.08
SCARB2-204ENST00000509994 L3MBTL2Q969R5 705 aa14.54□□□□□ -0.08
SCARB2-204ENST00000509994 SIN3AQ96ST3 1273 aa14.54□□□□□ -0.08
SCARB2-204ENST00000509994 CABP2Q9NPB3 220 aa14.54□□□□□ -0.08
SCARB2-204ENST00000509994 KIAA0232Q92628 1395 aa14.54□□□□□ -0.08
SCARB2-204ENST00000509994 BLMP54132 1417 aaPredicted RBP14.54□□□□□ -0.08
SCARB2-204ENST00000509994 TRPM1Q7Z4N2 1603 aa14.54□□□□□ -0.08
SCARB2-204ENST00000509994 ROCK2O75116 1388 aaKnown RBP14.53□□□□□ -0.08
SCARB2-204ENST00000509994 ZBTB7CA1YPR0 619 aa14.53□□□□□ -0.08
SCARB2-204ENST00000509994 NBPF8Q3BBV2 869 aa14.53□□□□□ -0.08
SCARB2-204ENST00000509994 POLR3AO14802 1390 aaPredicted RBP14.52□□□□□ -0.08
SCARB2-204ENST00000509994 EVA1CP58658 441 aa14.51□□□□□ -0.09
SCARB2-204ENST00000509994 USP35Q9P2H5 1018 aa14.5□□□□□ -0.09
SCARB2-204ENST00000509994 NRKQ7Z2Y5 1582 aa14.5□□□□□ -0.09
SCARB2-204ENST00000509994 SPATA31A5Q5VU36 1347 aa14.49□□□□□ -0.09
SCARB2-204ENST00000509994 EVC2Q86UK5 1308 aa14.49□□□□□ -0.09
SCARB2-204ENST00000509994 SPATA31A7Q8IWB4 1347 aa14.49□□□□□ -0.09
SCARB2-204ENST00000509994 PLEKHG3A1L390 1219 aa14.49□□□□□ -0.09
SCARB2-204ENST00000509994 DEFB132Q7Z7B7 95 aa14.49□□□□□ -0.09
SCARB2-204ENST00000509994 RGPD1P0DJD0 1748 aa14.49□□□□□ -0.09
SCARB2-204ENST00000509994 FAM182BQ5T319 152 aa14.48□□□□□ -0.09
SCARB2-204ENST00000509994 NLRP13Q86W25 1043 aa14.48□□□□□ -0.09
SCARB2-204ENST00000509994 ONECUT3O60422 494 aaPredicted RBP14.47□□□□□ -0.09
SCARB2-204ENST00000509994 BAG6P46379 1132 aa14.47□□□□□ -0.09
SCARB2-204ENST00000509994 CABP1Q9NZU7 370 aa14.47□□□□□ -0.09
SCARB2-204ENST00000509994 THSD7AQ9UPZ6 1657 aa14.46□□□□□ -0.09
SCARB2-204ENST00000509994 SPATA31A1Q5TZJ5 1347 aa14.45□□□□□ -0.1
SCARB2-204ENST00000509994 NLRP6P59044 892 aa14.45□□□□□ -0.1
SCARB2-204ENST00000509994 TONSLQ96HA7 1378 aa14.45□□□□□ -0.1
SCARB2-204ENST00000509994 USP6P35125 1406 aa14.44□□□□□ -0.1
SCARB2-204ENST00000509994 SSH2Q76I76 1423 aa14.44□□□□□ -0.1
SCARB2-204ENST00000509994 SRCAPQ6ZRS2 3230 aa14.43□□□□□ -0.1
SCARB2-204ENST00000509994 USP19O94966 1318 aa14.43□□□□□ -0.1
SCARB2-204ENST00000509994 AKAP12Q02952 1782 aa14.43□□□□□ -0.1
SCARB2-204ENST00000509994 SOX12O15370 315 aa14.43□□□□□ -0.1
SCARB2-204ENST00000509994 GCP02774 474 aa14.43□□□□□ -0.1
SCARB2-204ENST00000509994 PIK3C2AO00443 1686 aa14.42□□□□□ -0.1
SCARB2-204ENST00000509994 PDE3BQ13370 1112 aa14.42□□□□□ -0.1
SCARB2-204ENST00000509994 LARP1Q6PKG0 1096 aaKnown RBP14.42□□□□□ -0.1
SCARB2-204ENST00000509994 BRD4O60885 1362 aaPredicted RBP14.42□□□□□ -0.1
SCARB2-204ENST00000509994 LMO7Q8WWI1 1683 aa14.42□□□□□ -0.1
SCARB2-204ENST00000509994 CAMTA1Q9Y6Y1 1673 aa14.42□□□□□ -0.1
SCARB2-204ENST00000509994 CARD11Q9BXL7 1154 aa14.41□□□□□ -0.1
SCARB2-204ENST00000509994 CPDO75976 1380 aa14.41□□□□□ -0.1
SCARB2-204ENST00000509994 TNS1Q9HBL0 1735 aaKnown RBP14.41□□□□□ -0.1
SCARB2-204ENST00000509994 TCP11L2Q8N4U5 519 aa14.4□□□□□ -0.1
SCARB2-204ENST00000509994 PSDA5PKW4 1024 aaPredicted RBP14.39□□□□□ -0.11
SCARB2-204ENST00000509994 TRIM37O94972 964 aa14.39□□□□□ -0.11
SCARB2-204ENST00000509994 EN1Q05925 392 aaPredicted RBP14.39□□□□□ -0.11
SCARB2-204ENST00000509994 KTN1Q86UP2 1357 aaKnown RBP14.38□□□□□ -0.11
SCARB2-204ENST00000509994 RGPD5Q99666 1765 aa14.38□□□□□ -0.11
SCARB2-204ENST00000509994 FAM196AQ6ZSG2 479 aa14.38□□□□□ -0.11
SCARB2-204ENST00000509994 TMC1Q8TDI8 760 aa14.38□□□□□ -0.11
SCARB2-204ENST00000509994 ZNF692Q9BU19 519 aaPredicted RBP14.38□□□□□ -0.11
SCARB2-204ENST00000509994 COL5A2P05997 1499 aaPredicted RBP14.38□□□□□ -0.11
SCARB2-204ENST00000509994 SLIT3O75094 1523 aa14.37□□□□□ -0.11
SCARB2-204ENST00000509994 BARGINQ6ZT62 677 aa14.37□□□□□ -0.11
SCARB2-204ENST00000509994 TOM1L2Q6ZVM7 507 aa14.37□□□□□ -0.11
SCARB2-204ENST00000509994 MON2Q7Z3U7 1717 aa14.37□□□□□ -0.11
SCARB2-204ENST00000509994 CRB1P82279 1406 aa14.36□□□□□ -0.11
SCARB2-204ENST00000509994 CSB-PGBD3P0DP91 1061 aa14.36□□□□□ -0.11
SCARB2-204ENST00000509994 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.36□□□□□ -0.11
SCARB2-204ENST00000509994 TTC21BQ7Z4L5 1316 aa14.36□□□□□ -0.11
SCARB2-204ENST00000509994 PARP4Q9UKK3 1724 aaKnown RBP14.35□□□□□ -0.11
SCARB2-204ENST00000509994 APBA3O96018 575 aa14.35□□□□□ -0.11
SCARB2-204ENST00000509994 KCNH5Q8NCM2 988 aa14.35□□□□□ -0.11
SCARB2-204ENST00000509994 THRAP3Q9Y2W1 955 aaKnown RBP14.35□□□□□ -0.11
SCARB2-204ENST00000509994 WNK3Q9BYP7 1800 aa14.35□□□□□ -0.11
SCARB2-204ENST00000509994 TTC21AQ8NDW8 1320 aa14.35□□□□□ -0.11
SCARB2-204ENST00000509994 AATKQ6ZMQ8 1374 aa14.34□□□□□ -0.11
SCARB2-204ENST00000509994 CPSF1Q10570 1443 aaKnown RBP14.34□□□□□ -0.11
SCARB2-204ENST00000509994 TRIM26Q12899 539 aaPredicted RBP14.33□□□□□ -0.12
SCARB2-204ENST00000509994 EZH2Q15910 746 aaKnown RBP14.33□□□□□ -0.12
SCARB2-204ENST00000509994 HDGFL2Q7Z4V5 671 aaPredicted RBP14.33□□□□□ -0.12
SCARB2-204ENST00000509994 LRRC37A3O60309 1634 aa14.33□□□□□ -0.12
SCARB2-204ENST00000509994 LTN1O94822 1766 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms